MICAS: Microsatellite Analysis Server 3.0

All Repeats of Tropheryma whipplei TW08/27

Total Repeats: 17064

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
17001	NC_004551	GCC	2	6	922252	922257	0 %	0 %	33.33 %	66.67 %	28572954
17002	NC_004551	AAC	2	6	922260	922265	66.67 %	0 %	0 %	33.33 %	28572954
17003	NC_004551	GC	4	8	922267	922274	0 %	0 %	50 %	50 %	28572954
17004	NC_004551	AGA	2	6	922318	922323	66.67 %	0 %	33.33 %	0 %	28572954
17005	NC_004551	AAC	2	6	922404	922409	66.67 %	0 %	0 %	33.33 %	28572954
17006	NC_004551	TTG	2	6	922436	922441	0 %	66.67 %	33.33 %	0 %	28572954
17007	NC_004551	GC	4	8	922682	922689	0 %	0 %	50 %	50 %	28572954
17008	NC_004551	ACC	2	6	922738	922743	33.33 %	0 %	0 %	66.67 %	28572954
17009	NC_004551	TGC	2	6	922817	922822	0 %	33.33 %	33.33 %	33.33 %	28572954
17010	NC_004551	GAAA	2	8	922833	922840	75 %	0 %	25 %	0 %	28572954
17011	NC_004551	ACC	2	6	922906	922911	33.33 %	0 %	0 %	66.67 %	28572954
17012	NC_004551	GCCA	2	8	922956	922963	25 %	0 %	25 %	50 %	28572954
17013	NC_004551	A	6	6	923132	923137	100 %	0 %	0 %	0 %	28572954
17014	NC_004551	GACC	2	8	923145	923152	25 %	0 %	25 %	50 %	28572954
17015	NC_004551	AC	4	8	923164	923171	50 %	0 %	0 %	50 %	28572954
17016	NC_004551	AGGCC	2	10	923241	923250	20 %	0 %	40 %	40 %	28572954
17017	NC_004551	AAG	2	6	923322	923327	66.67 %	0 %	33.33 %	0 %	28572954
17018	NC_004551	ACC	2	6	923458	923463	33.33 %	0 %	0 %	66.67 %	28572954
17019	NC_004551	CTT	2	6	923559	923564	0 %	66.67 %	0 %	33.33 %	28572954
17020	NC_004551	TC	3	6	923572	923577	0 %	50 %	0 %	50 %	28572954
17021	NC_004551	ACG	2	6	923582	923587	33.33 %	0 %	33.33 %	33.33 %	28572954
17022	NC_004551	AT	3	6	923603	923608	50 %	50 %	0 %	0 %	28572954
17023	NC_004551	TAA	2	6	923615	923620	66.67 %	33.33 %	0 %	0 %	28572954
17024	NC_004551	ACA	2	6	923712	923717	66.67 %	0 %	0 %	33.33 %	28572955
17025	NC_004551	TTC	2	6	923785	923790	0 %	66.67 %	0 %	33.33 %	28572955
17026	NC_004551	CCT	2	6	923878	923883	0 %	33.33 %	0 %	66.67 %	28572955
17027	NC_004551	GC	4	8	923935	923942	0 %	0 %	50 %	50 %	28572955
17028	NC_004551	ACC	2	6	923985	923990	33.33 %	0 %	0 %	66.67 %	28572955
17029	NC_004551	ATC	2	6	924020	924025	33.33 %	33.33 %	0 %	33.33 %	28572955
17030	NC_004551	TCT	2	6	924048	924053	0 %	66.67 %	0 %	33.33 %	28572955
17031	NC_004551	AT	3	6	924088	924093	50 %	50 %	0 %	0 %	28572955
17032	NC_004551	GCG	2	6	924117	924122	0 %	0 %	66.67 %	33.33 %	28572955
17033	NC_004551	TGC	2	6	924235	924240	0 %	33.33 %	33.33 %	33.33 %	28572956
17034	NC_004551	T	7	7	924254	924260	0 %	100 %	0 %	0 %	28572956
17035	NC_004551	CTG	2	6	924339	924344	0 %	33.33 %	33.33 %	33.33 %	28572956
17036	NC_004551	ATA	2	6	924538	924543	66.67 %	33.33 %	0 %	0 %	28572956
17037	NC_004551	AAC	2	6	924639	924644	66.67 %	0 %	0 %	33.33 %	28572956
17038	NC_004551	GAA	2	6	924747	924752	66.67 %	0 %	33.33 %	0 %	28572956
17039	NC_004551	CAT	2	6	924822	924827	33.33 %	33.33 %	0 %	33.33 %	28572956
17040	NC_004551	TCC	2	6	924887	924892	0 %	33.33 %	0 %	66.67 %	28572956
17041	NC_004551	AATAAC	2	12	924969	924980	66.67 %	16.67 %	0 %	16.67 %	28572956
17042	NC_004551	CAA	2	6	924986	924991	66.67 %	0 %	0 %	33.33 %	28572956
17043	NC_004551	A	8	8	925053	925060	100 %	0 %	0 %	0 %	28572956
17044	NC_004551	AT	3	6	925097	925102	50 %	50 %	0 %	0 %	28572956
17045	NC_004551	T	6	6	925133	925138	0 %	100 %	0 %	0 %	28572956
17046	NC_004551	TTA	2	6	925157	925162	33.33 %	66.67 %	0 %	0 %	28572957
17047	NC_004551	TGC	2	6	925246	925251	0 %	33.33 %	33.33 %	33.33 %	28572957
17048	NC_004551	AAGA	2	8	925255	925262	75 %	0 %	25 %	0 %	28572957
17049	NC_004551	AAT	2	6	925342	925347	66.67 %	33.33 %	0 %	0 %	28572957
17050	NC_004551	ATG	2	6	925361	925366	33.33 %	33.33 %	33.33 %	0 %	28572957
17051	NC_004551	T	6	6	925419	925424	0 %	100 %	0 %	0 %	28572958
17052	NC_004551	CT	3	6	925448	925453	0 %	50 %	0 %	50 %	28572958
17053	NC_004551	TC	3	6	925511	925516	0 %	50 %	0 %	50 %	28572958
17054	NC_004551	ACA	2	6	925578	925583	66.67 %	0 %	0 %	33.33 %	28572958
17055	NC_004551	T	6	6	925596	925601	0 %	100 %	0 %	0 %	28572958
17056	NC_004551	CAA	2	6	925615	925620	66.67 %	0 %	0 %	33.33 %	28572958
17057	NC_004551	T	8	8	925625	925632	0 %	100 %	0 %	0 %	28572958
17058	NC_004551	T	8	8	925707	925714	0 %	100 %	0 %	0 %	28572958
17059	NC_004551	CGA	2	6	925777	925782	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17060	NC_004551	ATT	2	6	925792	925797	33.33 %	66.67 %	0 %	0 %	Non-Coding
17061	NC_004551	CCTTTT	2	12	925848	925859	0 %	66.67 %	0 %	33.33 %	Non-Coding
17062	NC_004551	GTAC	2	8	925869	925876	25 %	25 %	25 %	25 %	Non-Coding
17063	NC_004551	TCAA	2	8	925898	925905	50 %	25 %	0 %	25 %	Non-Coding
17064	NC_004551	AATTC	2	10	925918	925927	40 %	40 %	0 %	20 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.