MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Streptomyces rapamycinicus NRRL 5491 genome

Total Repeats: 51106

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
51001	NC_022785	TCC	2	6	12671011	12671016	0 %	33.33 %	0 %	66.67 %	Non-Coding
51002	NC_022785	GCC	2	6	12671020	12671025	0 %	0 %	33.33 %	66.67 %	Non-Coding
51003	NC_022785	TAC	2	6	12671029	12671034	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51004	NC_022785	CGT	2	6	12671383	12671388	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51005	NC_022785	CTC	2	6	12671447	12671452	0 %	33.33 %	0 %	66.67 %	Non-Coding
51006	NC_022785	CCTG	2	8	12671846	12671853	0 %	25 %	25 %	50 %	Non-Coding
51007	NC_022785	GCA	2	6	12671924	12671929	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51008	NC_022785	GGT	3	9	12672021	12672029	0 %	33.33 %	66.67 %	0 %	Non-Coding
51009	NC_022785	GCC	2	6	12672051	12672056	0 %	0 %	33.33 %	66.67 %	Non-Coding
51010	NC_022785	CCG	2	6	12672093	12672098	0 %	0 %	33.33 %	66.67 %	Non-Coding
51011	NC_022785	GCC	2	6	12677171	12677176	0 %	0 %	33.33 %	66.67 %	Non-Coding
51012	NC_022785	GCG	3	9	12677187	12677195	0 %	0 %	66.67 %	33.33 %	Non-Coding
51013	NC_022785	CGT	2	6	12677249	12677254	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51014	NC_022785	GTCCGT	2	12	12677255	12677266	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51015	NC_022785	GCG	2	6	12677297	12677302	0 %	0 %	66.67 %	33.33 %	Non-Coding
51016	NC_022785	CGGA	2	8	12677303	12677310	25 %	0 %	50 %	25 %	Non-Coding
51017	NC_022785	CCGTG	2	10	12677363	12677372	0 %	20 %	40 %	40 %	Non-Coding
51018	NC_022785	CGCT	2	8	12677386	12677393	0 %	25 %	25 %	50 %	Non-Coding
51019	NC_022785	CCG	2	6	12677479	12677484	0 %	0 %	33.33 %	66.67 %	Non-Coding
51020	NC_022785	CCG	2	6	12677500	12677505	0 %	0 %	33.33 %	66.67 %	Non-Coding
51021	NC_022785	CGC	2	6	12677514	12677519	0 %	0 %	33.33 %	66.67 %	Non-Coding
51022	NC_022785	CGGAT	2	10	12677533	12677542	20 %	20 %	40 %	20 %	Non-Coding
51023	NC_022785	GAA	2	6	12677545	12677550	66.67 %	0 %	33.33 %	0 %	Non-Coding
51024	NC_022785	GCC	2	6	12679607	12679612	0 %	0 %	33.33 %	66.67 %	Non-Coding
51025	NC_022785	GCCC	2	8	12679645	12679652	0 %	0 %	25 %	75 %	Non-Coding
51026	NC_022785	CCG	2	6	12679682	12679687	0 %	0 %	33.33 %	66.67 %	Non-Coding
51027	NC_022785	GCCG	2	8	12681302	12681309	0 %	0 %	50 %	50 %	Non-Coding
51028	NC_022785	GCA	2	6	12681402	12681407	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51029	NC_022785	N	1413	1413	12681438	12682850	0 %	0 %	0 %	0 %	Non-Coding
51030	NC_022785	TCTTTT	2	12	12682918	12682929	0 %	83.33 %	0 %	16.67 %	Non-Coding
51031	NC_022785	T	6	6	12682926	12682931	0 %	100 %	0 %	0 %	Non-Coding
51032	NC_022785	T	6	6	12682955	12682960	0 %	100 %	0 %	0 %	Non-Coding
51033	NC_022785	GGT	2	6	12682961	12682966	0 %	33.33 %	66.67 %	0 %	Non-Coding
51034	NC_022785	G	6	6	12682992	12682997	0 %	0 %	100 %	0 %	Non-Coding
51035	NC_022785	ACG	2	6	12683041	12683046	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51036	NC_022785	CT	3	6	12683171	12683176	0 %	50 %	0 %	50 %	Non-Coding
51037	NC_022785	CGG	2	6	12683211	12683216	0 %	0 %	66.67 %	33.33 %	Non-Coding
51038	NC_022785	AGC	2	6	12683258	12683263	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51039	NC_022785	TGGCG	2	10	12683345	12683354	0 %	20 %	60 %	20 %	Non-Coding
51040	NC_022785	CAC	2	6	12683402	12683407	33.33 %	0 %	0 %	66.67 %	Non-Coding
51041	NC_022785	GAT	2	6	12683498	12683503	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51042	NC_022785	ACC	2	6	12683617	12683622	33.33 %	0 %	0 %	66.67 %	Non-Coding
51043	NC_022785	CA	3	6	12683646	12683651	50 %	0 %	0 %	50 %	Non-Coding
51044	NC_022785	GCT	2	6	12683843	12683848	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51045	NC_022785	TCG	2	6	12683859	12683864	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51046	NC_022785	AGG	2	6	12683873	12683878	33.33 %	0 %	66.67 %	0 %	Non-Coding
51047	NC_022785	GAG	2	6	12683939	12683944	33.33 %	0 %	66.67 %	0 %	Non-Coding
51048	NC_022785	TGG	2	6	12684066	12684071	0 %	33.33 %	66.67 %	0 %	Non-Coding
51049	NC_022785	ACG	2	6	12684090	12684095	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51050	NC_022785	CGA	2	6	12684164	12684169	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51051	NC_022785	A	6	6	12684309	12684314	100 %	0 %	0 %	0 %	Non-Coding
51052	NC_022785	TGG	2	6	12684322	12684327	0 %	33.33 %	66.67 %	0 %	Non-Coding
51053	NC_022785	GGC	2	6	12684403	12684408	0 %	0 %	66.67 %	33.33 %	Non-Coding
51054	NC_022785	GGC	2	6	12684428	12684433	0 %	0 %	66.67 %	33.33 %	Non-Coding
51055	NC_022785	TGTA	2	8	12684443	12684450	25 %	50 %	25 %	0 %	Non-Coding
51056	NC_022785	AC	4	8	12685528	12685535	50 %	0 %	0 %	50 %	Non-Coding
51057	NC_022785	GCA	2	6	12687347	12687352	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51058	NC_022785	GAG	2	6	12687371	12687376	33.33 %	0 %	66.67 %	0 %	Non-Coding
51059	NC_022785	CAT	2	6	12687969	12687974	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51060	NC_022785	CGGT	2	8	12687990	12687997	0 %	25 %	50 %	25 %	Non-Coding
51061	NC_022785	GCGA	2	8	12688034	12688041	25 %	0 %	50 %	25 %	Non-Coding
51062	NC_022785	CGA	2	6	12688060	12688065	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51063	NC_022785	CGC	2	6	12688068	12688073	0 %	0 %	33.33 %	66.67 %	Non-Coding
51064	NC_022785	GGC	2	6	12688178	12688183	0 %	0 %	66.67 %	33.33 %	Non-Coding
51065	NC_022785	CAC	2	6	12688198	12688203	33.33 %	0 %	0 %	66.67 %	Non-Coding
51066	NC_022785	CGT	2	6	12688222	12688227	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51067	NC_022785	TCGGG	2	10	12688419	12688428	0 %	20 %	60 %	20 %	Non-Coding
51068	NC_022785	GC	3	6	12688455	12688460	0 %	0 %	50 %	50 %	Non-Coding
51069	NC_022785	CGG	2	6	12688519	12688524	0 %	0 %	66.67 %	33.33 %	Non-Coding
51070	NC_022785	CCG	2	6	12688586	12688591	0 %	0 %	33.33 %	66.67 %	Non-Coding
51071	NC_022785	CGC	2	6	12688610	12688615	0 %	0 %	33.33 %	66.67 %	Non-Coding
51072	NC_022785	CGGGC	2	10	12688627	12688636	0 %	0 %	60 %	40 %	Non-Coding
51073	NC_022785	CGG	2	6	12688679	12688684	0 %	0 %	66.67 %	33.33 %	Non-Coding
51074	NC_022785	CGC	2	6	12688688	12688693	0 %	0 %	33.33 %	66.67 %	Non-Coding
51075	NC_022785	G	8	8	12688709	12688716	0 %	0 %	100 %	0 %	Non-Coding
51076	NC_022785	CGC	3	9	12688757	12688765	0 %	0 %	33.33 %	66.67 %	Non-Coding
51077	NC_022785	GTG	3	9	12688776	12688784	0 %	33.33 %	66.67 %	0 %	Non-Coding
51078	NC_022785	AG	3	6	12688913	12688918	50 %	0 %	50 %	0 %	Non-Coding
51079	NC_022785	ACC	2	6	12688926	12688931	33.33 %	0 %	0 %	66.67 %	Non-Coding
51080	NC_022785	GGC	3	9	12688979	12688987	0 %	0 %	66.67 %	33.33 %	Non-Coding
51081	NC_022785	CAAGG	2	10	12689543	12689552	40 %	0 %	40 %	20 %	Non-Coding
51082	NC_022785	CGG	2	6	12690164	12690169	0 %	0 %	66.67 %	33.33 %	Non-Coding
51083	NC_022785	CTG	2	6	12690685	12690690	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51084	NC_022785	CCG	2	6	12690691	12690696	0 %	0 %	33.33 %	66.67 %	Non-Coding
51085	NC_022785	AGC	2	6	12690730	12690735	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51086	NC_022785	TCT	2	6	12691265	12691270	0 %	66.67 %	0 %	33.33 %	Non-Coding
51087	NC_022785	CTGG	2	8	12691637	12691644	0 %	25 %	50 %	25 %	Non-Coding
51088	NC_022785	GTG	2	6	12691661	12691666	0 %	33.33 %	66.67 %	0 %	Non-Coding
51089	NC_022785	CGG	2	6	12691678	12691683	0 %	0 %	66.67 %	33.33 %	Non-Coding
51090	NC_022785	GTG	2	6	12691697	12691702	0 %	33.33 %	66.67 %	0 %	Non-Coding
51091	NC_022785	GAC	2	6	12691716	12691721	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51092	NC_022785	TGC	2	6	12692738	12692743	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51093	NC_022785	CAG	2	6	12692756	12692761	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51094	NC_022785	GAC	2	6	12692852	12692857	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51095	NC_022785	GCC	2	6	12693711	12693716	0 %	0 %	33.33 %	66.67 %	Non-Coding
51096	NC_022785	GAC	2	6	12693725	12693730	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51097	NC_022785	TC	3	6	12694747	12694752	0 %	50 %	0 %	50 %	Non-Coding
51098	NC_022785	GA	3	6	12694782	12694787	50 %	0 %	50 %	0 %	Non-Coding
51099	NC_022785	CGT	2	6	12694921	12694926	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51100	NC_022785	GCT	2	6	12694939	12694944	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51101	NC_022785	GA	3	6	12696061	12696066	50 %	0 %	50 %	0 %	Non-Coding
51102	NC_022785	GTCG	2	8	12700333	12700340	0 %	25 %	50 %	25 %	Non-Coding
51103	NC_022785	CGGAC	2	10	12700398	12700407	20 %	0 %	40 %	40 %	Non-Coding
51104	NC_022785	TGG	2	6	12700587	12700592	0 %	33.33 %	66.67 %	0 %	Non-Coding
51105	NC_022785	CGGC	2	8	12700694	12700701	0 %	0 %	50 %	50 %	Non-Coding
51106	NC_022785	CCG	2	6	12700706	12700711	0 %	0 %	33.33 %	66.67 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.