MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Shigella flexneri 2002017 chromosome

Total Repeats: 18169

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
18001	NC_017328	TG	3	6	4591674	4591679	0 %	50 %	50 %	0 %	Non-Coding
18002	NC_017328	ATA	2	6	4591817	4591822	66.67 %	33.33 %	0 %	0 %	Non-Coding
18003	NC_017328	T	6	6	4591855	4591860	0 %	100 %	0 %	0 %	Non-Coding
18004	NC_017328	GAATG	2	10	4591868	4591877	40 %	20 %	40 %	0 %	Non-Coding
18005	NC_017328	TC	3	6	4592803	4592808	0 %	50 %	0 %	50 %	Non-Coding
18006	NC_017328	TC	3	6	4595907	4595912	0 %	50 %	0 %	50 %	Non-Coding
18007	NC_017328	ATC	2	6	4596757	4596762	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18008	NC_017328	CTC	2	6	4600786	4600791	0 %	33.33 %	0 %	66.67 %	Non-Coding
18009	NC_017328	ATC	2	6	4600799	4600804	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18010	NC_017328	AAGT	2	8	4600859	4600866	50 %	25 %	25 %	0 %	Non-Coding
18011	NC_017328	ATA	2	6	4600909	4600914	66.67 %	33.33 %	0 %	0 %	Non-Coding
18012	NC_017328	TAA	2	6	4600936	4600941	66.67 %	33.33 %	0 %	0 %	Non-Coding
18013	NC_017328	ATC	2	6	4600945	4600950	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18014	NC_017328	GAA	2	6	4600965	4600970	66.67 %	0 %	33.33 %	0 %	Non-Coding
18015	NC_017328	TGA	2	6	4600999	4601004	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18016	NC_017328	ATGG	2	8	4601535	4601542	25 %	25 %	50 %	0 %	Non-Coding
18017	NC_017328	TAC	2	6	4604782	4604787	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18018	NC_017328	TCC	2	6	4605825	4605830	0 %	33.33 %	0 %	66.67 %	Non-Coding
18019	NC_017328	GT	3	6	4605871	4605876	0 %	50 %	50 %	0 %	Non-Coding
18020	NC_017328	TTCCG	2	10	4605893	4605902	0 %	40 %	20 %	40 %	Non-Coding
18021	NC_017328	TTTTCA	2	12	4605910	4605921	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
18022	NC_017328	CAA	2	6	4605935	4605940	66.67 %	0 %	0 %	33.33 %	Non-Coding
18023	NC_017328	A	6	6	4605939	4605944	100 %	0 %	0 %	0 %	Non-Coding
18024	NC_017328	CAG	2	6	4605986	4605991	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18025	NC_017328	AAC	2	6	4606011	4606016	66.67 %	0 %	0 %	33.33 %	Non-Coding
18026	NC_017328	TAA	2	6	4606050	4606055	66.67 %	33.33 %	0 %	0 %	Non-Coding
18027	NC_017328	T	6	6	4606115	4606120	0 %	100 %	0 %	0 %	Non-Coding
18028	NC_017328	TTG	2	6	4606161	4606166	0 %	66.67 %	33.33 %	0 %	Non-Coding
18029	NC_017328	ATT	2	6	4606991	4606996	33.33 %	66.67 %	0 %	0 %	Non-Coding
18030	NC_017328	T	8	8	4607036	4607043	0 %	100 %	0 %	0 %	Non-Coding
18031	NC_017328	TAA	2	6	4607050	4607055	66.67 %	33.33 %	0 %	0 %	Non-Coding
18032	NC_017328	TGT	2	6	4607058	4607063	0 %	66.67 %	33.33 %	0 %	Non-Coding
18033	NC_017328	TCAG	2	8	4607108	4607115	25 %	25 %	25 %	25 %	Non-Coding
18034	NC_017328	TGC	2	6	4609490	4609495	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18035	NC_017328	A	7	7	4609508	4609514	100 %	0 %	0 %	0 %	Non-Coding
18036	NC_017328	TGT	2	6	4609520	4609525	0 %	66.67 %	33.33 %	0 %	Non-Coding
18037	NC_017328	T	6	6	4609549	4609554	0 %	100 %	0 %	0 %	Non-Coding
18038	NC_017328	GA	3	6	4609615	4609620	50 %	0 %	50 %	0 %	Non-Coding
18039	NC_017328	AC	3	6	4611526	4611531	50 %	0 %	0 %	50 %	Non-Coding
18040	NC_017328	GGA	2	6	4611532	4611537	33.33 %	0 %	66.67 %	0 %	Non-Coding
18041	NC_017328	GAG	2	6	4611538	4611543	33.33 %	0 %	66.67 %	0 %	Non-Coding
18042	NC_017328	TC	3	6	4611548	4611553	0 %	50 %	0 %	50 %	Non-Coding
18043	NC_017328	GTT	2	6	4612885	4612890	0 %	66.67 %	33.33 %	0 %	Non-Coding
18044	NC_017328	TC	3	6	4612967	4612972	0 %	50 %	0 %	50 %	Non-Coding
18045	NC_017328	CAAA	2	8	4612977	4612984	75 %	0 %	0 %	25 %	Non-Coding
18046	NC_017328	ATA	2	6	4613042	4613047	66.67 %	33.33 %	0 %	0 %	Non-Coding
18047	NC_017328	T	6	6	4613062	4613067	0 %	100 %	0 %	0 %	Non-Coding
18048	NC_017328	ATC	2	6	4613085	4613090	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18049	NC_017328	AATA	2	8	4613102	4613109	75 %	25 %	0 %	0 %	Non-Coding
18050	NC_017328	TG	3	6	4613115	4613120	0 %	50 %	50 %	0 %	Non-Coding
18051	NC_017328	TAAAT	2	10	4613158	4613167	60 %	40 %	0 %	0 %	Non-Coding
18052	NC_017328	AAC	2	6	4613201	4613206	66.67 %	0 %	0 %	33.33 %	Non-Coding
18053	NC_017328	GTT	2	6	4613287	4613292	0 %	66.67 %	33.33 %	0 %	Non-Coding
18054	NC_017328	GCA	2	6	4613295	4613300	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18055	NC_017328	TGC	2	6	4613387	4613392	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18056	NC_017328	ATG	2	6	4613412	4613417	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18057	NC_017328	TTCCAT	2	12	4613442	4613453	16.67 %	50 %	0 %	33.33 %	Non-Coding
18058	NC_017328	TCCT	2	8	4613460	4613467	0 %	50 %	0 %	50 %	Non-Coding
18059	NC_017328	GTG	2	6	4613485	4613490	0 %	33.33 %	66.67 %	0 %	Non-Coding
18060	NC_017328	ATG	2	6	4615361	4615366	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18061	NC_017328	AATGAT	2	12	4616200	4616211	50 %	33.33 %	16.67 %	0 %	Non-Coding
18062	NC_017328	GAA	2	6	4616568	4616573	66.67 %	0 %	33.33 %	0 %	Non-Coding
18063	NC_017328	G	8	8	4616605	4616612	0 %	0 %	100 %	0 %	Non-Coding
18064	NC_017328	T	7	7	4616697	4616703	0 %	100 %	0 %	0 %	Non-Coding
18065	NC_017328	G	8	8	4616726	4616733	0 %	0 %	100 %	0 %	Non-Coding
18066	NC_017328	G	8	8	4616841	4616848	0 %	0 %	100 %	0 %	Non-Coding
18067	NC_017328	CGC	2	6	4617155	4617160	0 %	0 %	33.33 %	66.67 %	Non-Coding
18068	NC_017328	GCG	2	6	4617175	4617180	0 %	0 %	66.67 %	33.33 %	Non-Coding
18069	NC_017328	CTC	2	6	4618234	4618239	0 %	33.33 %	0 %	66.67 %	Non-Coding
18070	NC_017328	GGC	2	6	4618250	4618255	0 %	0 %	66.67 %	33.33 %	Non-Coding
18071	NC_017328	CGA	2	6	4618283	4618288	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18072	NC_017328	ACA	2	6	4618311	4618316	66.67 %	0 %	0 %	33.33 %	Non-Coding
18073	NC_017328	C	7	7	4619857	4619863	0 %	0 %	0 %	100 %	Non-Coding
18074	NC_017328	CAA	2	6	4619898	4619903	66.67 %	0 %	0 %	33.33 %	Non-Coding
18075	NC_017328	GCGCG	2	10	4619904	4619913	0 %	0 %	60 %	40 %	Non-Coding
18076	NC_017328	AAG	2	6	4619927	4619932	66.67 %	0 %	33.33 %	0 %	Non-Coding
18077	NC_017328	TTA	2	6	4621581	4621586	33.33 %	66.67 %	0 %	0 %	Non-Coding
18078	NC_017328	TGA	2	6	4621681	4621686	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18079	NC_017328	TAA	2	6	4621764	4621769	66.67 %	33.33 %	0 %	0 %	Non-Coding
18080	NC_017328	TCA	2	6	4621798	4621803	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18081	NC_017328	TC	3	6	4621851	4621856	0 %	50 %	0 %	50 %	Non-Coding
18082	NC_017328	TCC	2	6	4622533	4622538	0 %	33.33 %	0 %	66.67 %	Non-Coding
18083	NC_017328	CAC	2	6	4622565	4622570	33.33 %	0 %	0 %	66.67 %	Non-Coding
18084	NC_017328	CAT	2	6	4622659	4622664	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18085	NC_017328	CGC	3	9	4622686	4622694	0 %	0 %	33.33 %	66.67 %	Non-Coding
18086	NC_017328	TGG	2	6	4622704	4622709	0 %	33.33 %	66.67 %	0 %	Non-Coding
18087	NC_017328	GTC	2	6	4622750	4622755	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18088	NC_017328	ATT	2	6	4622759	4622764	33.33 %	66.67 %	0 %	0 %	Non-Coding
18089	NC_017328	AAT	2	6	4622873	4622878	66.67 %	33.33 %	0 %	0 %	Non-Coding
18090	NC_017328	TCTT	2	8	4622895	4622902	0 %	75 %	0 %	25 %	Non-Coding
18091	NC_017328	CAA	2	6	4622906	4622911	66.67 %	0 %	0 %	33.33 %	Non-Coding
18092	NC_017328	GCA	2	6	4624795	4624800	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18093	NC_017328	CGC	2	6	4624895	4624900	0 %	0 %	33.33 %	66.67 %	Non-Coding
18094	NC_017328	ATT	2	6	4627478	4627483	33.33 %	66.67 %	0 %	0 %	Non-Coding
18095	NC_017328	GT	3	6	4627551	4627556	0 %	50 %	50 %	0 %	Non-Coding
18096	NC_017328	TGCGC	2	10	4628428	4628437	0 %	20 %	40 %	40 %	Non-Coding
18097	NC_017328	GCC	2	6	4628501	4628506	0 %	0 %	33.33 %	66.67 %	Non-Coding
18098	NC_017328	CTGAT	2	10	4629864	4629873	20 %	40 %	20 %	20 %	Non-Coding
18099	NC_017328	TCA	2	6	4631979	4631984	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18100	NC_017328	TAT	2	6	4632009	4632014	33.33 %	66.67 %	0 %	0 %	Non-Coding
18101	NC_017328	A	6	6	4632035	4632040	100 %	0 %	0 %	0 %	Non-Coding
18102	NC_017328	TCCT	2	8	4632335	4632342	0 %	50 %	0 %	50 %	Non-Coding
18103	NC_017328	TTACC	2	10	4632363	4632372	20 %	40 %	0 %	40 %	Non-Coding
18104	NC_017328	CAAC	2	8	4632428	4632435	50 %	0 %	0 %	50 %	Non-Coding
18105	NC_017328	TTG	2	6	4632450	4632455	0 %	66.67 %	33.33 %	0 %	Non-Coding
18106	NC_017328	CG	3	6	4632465	4632470	0 %	0 %	50 %	50 %	Non-Coding
18107	NC_017328	GCG	2	6	4632509	4632514	0 %	0 %	66.67 %	33.33 %	Non-Coding
18108	NC_017328	CGC	2	6	4632587	4632592	0 %	0 %	33.33 %	66.67 %	Non-Coding
18109	NC_017328	CAG	2	6	4632612	4632617	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18110	NC_017328	GAT	2	6	4632717	4632722	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18111	NC_017328	GCA	2	6	4632802	4632807	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18112	NC_017328	CGC	2	6	4632854	4632859	0 %	0 %	33.33 %	66.67 %	Non-Coding
18113	NC_017328	GGC	2	6	4632895	4632900	0 %	0 %	66.67 %	33.33 %	Non-Coding
18114	NC_017328	GTG	2	6	4632929	4632934	0 %	33.33 %	66.67 %	0 %	Non-Coding
18115	NC_017328	CAC	2	6	4633001	4633006	33.33 %	0 %	0 %	66.67 %	Non-Coding
18116	NC_017328	GCCA	2	8	4633103	4633110	25 %	0 %	25 %	50 %	Non-Coding
18117	NC_017328	CGC	2	6	4633150	4633155	0 %	0 %	33.33 %	66.67 %	Non-Coding
18118	NC_017328	GCGCC	2	10	4633166	4633175	0 %	0 %	40 %	60 %	Non-Coding
18119	NC_017328	TCT	2	6	4633188	4633193	0 %	66.67 %	0 %	33.33 %	Non-Coding
18120	NC_017328	CCG	2	6	4633199	4633204	0 %	0 %	33.33 %	66.67 %	Non-Coding
18121	NC_017328	GC	3	6	4633231	4633236	0 %	0 %	50 %	50 %	Non-Coding
18122	NC_017328	TAC	2	6	4633244	4633249	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18123	NC_017328	GTA	2	6	4633395	4633400	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18124	NC_017328	TGCC	2	8	4635126	4635133	0 %	25 %	25 %	50 %	Non-Coding
18125	NC_017328	GCGG	2	8	4635143	4635150	0 %	0 %	75 %	25 %	Non-Coding
18126	NC_017328	GA	3	6	4636557	4636562	50 %	0 %	50 %	0 %	Non-Coding
18127	NC_017328	GGAG	2	8	4636566	4636573	25 %	0 %	75 %	0 %	Non-Coding
18128	NC_017328	T	7	7	4637847	4637853	0 %	100 %	0 %	0 %	Non-Coding
18129	NC_017328	CT	3	6	4637868	4637873	0 %	50 %	0 %	50 %	Non-Coding
18130	NC_017328	A	6	6	4637905	4637910	100 %	0 %	0 %	0 %	Non-Coding
18131	NC_017328	TGT	2	6	4637952	4637957	0 %	66.67 %	33.33 %	0 %	Non-Coding
18132	NC_017328	CGC	2	6	4637977	4637982	0 %	0 %	33.33 %	66.67 %	Non-Coding
18133	NC_017328	CGC	2	6	4638093	4638098	0 %	0 %	33.33 %	66.67 %	Non-Coding
18134	NC_017328	TGA	3	9	4639810	4639818	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18135	NC_017328	AGTAAA	2	12	4639881	4639892	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18136	NC_017328	A	6	6	4639890	4639895	100 %	0 %	0 %	0 %	Non-Coding
18137	NC_017328	GCG	2	6	4642409	4642414	0 %	0 %	66.67 %	33.33 %	Non-Coding
18138	NC_017328	GAGT	2	8	4642506	4642513	25 %	25 %	50 %	0 %	Non-Coding
18139	NC_017328	CGG	2	6	4642518	4642523	0 %	0 %	66.67 %	33.33 %	Non-Coding
18140	NC_017328	CCTT	2	8	4642541	4642548	0 %	50 %	0 %	50 %	Non-Coding
18141	NC_017328	TCA	2	6	4642559	4642564	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18142	NC_017328	CAG	2	6	4642981	4642986	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18143	NC_017328	A	7	7	4642994	4643000	100 %	0 %	0 %	0 %	Non-Coding
18144	NC_017328	CAA	2	6	4644535	4644540	66.67 %	0 %	0 %	33.33 %	Non-Coding
18145	NC_017328	ATA	2	6	4644566	4644571	66.67 %	33.33 %	0 %	0 %	Non-Coding
18146	NC_017328	T	6	6	4644575	4644580	0 %	100 %	0 %	0 %	Non-Coding
18147	NC_017328	T	7	7	4644600	4644606	0 %	100 %	0 %	0 %	Non-Coding
18148	NC_017328	TAG	2	6	4644609	4644614	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18149	NC_017328	TTC	2	6	4647334	4647339	0 %	66.67 %	0 %	33.33 %	Non-Coding
18150	NC_017328	CTG	2	6	4647358	4647363	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18151	NC_017328	T	7	7	4648771	4648777	0 %	100 %	0 %	0 %	Non-Coding
18152	NC_017328	GGT	2	6	4648781	4648786	0 %	33.33 %	66.67 %	0 %	Non-Coding
18153	NC_017328	CCTG	2	8	4649566	4649573	0 %	25 %	25 %	50 %	Non-Coding
18154	NC_017328	ATGC	2	8	4649574	4649581	25 %	25 %	25 %	25 %	Non-Coding
18155	NC_017328	AT	3	6	4649794	4649799	50 %	50 %	0 %	0 %	Non-Coding
18156	NC_017328	TGA	2	6	4649828	4649833	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18157	NC_017328	ATC	2	6	4649835	4649840	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18158	NC_017328	ATT	2	6	4649866	4649871	33.33 %	66.67 %	0 %	0 %	Non-Coding
18159	NC_017328	TAA	2	6	4649873	4649878	66.67 %	33.33 %	0 %	0 %	Non-Coding
18160	NC_017328	CAT	2	6	4649891	4649896	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18161	NC_017328	TAA	2	6	4649902	4649907	66.67 %	33.33 %	0 %	0 %	Non-Coding
18162	NC_017328	GTG	2	6	4649910	4649915	0 %	33.33 %	66.67 %	0 %	Non-Coding
18163	NC_017328	ATTT	2	8	4649931	4649938	25 %	75 %	0 %	0 %	Non-Coding
18164	NC_017328	T	6	6	4649936	4649941	0 %	100 %	0 %	0 %	Non-Coding
18165	NC_017328	T	6	6	4649979	4649984	0 %	100 %	0 %	0 %	Non-Coding
18166	NC_017328	T	6	6	4650025	4650030	0 %	100 %	0 %	0 %	Non-Coding
18167	NC_017328	TAA	2	6	4650090	4650095	66.67 %	33.33 %	0 %	0 %	Non-Coding
18168	NC_017328	AAG	2	6	4650132	4650137	66.67 %	0 %	33.33 %	0 %	Non-Coding
18169	NC_017328	AGTA	2	8	4650843	4650850	50 %	25 %	25 %	0 %	Non-Coding

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