MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 chromosome

Total Repeats: 19633

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
19501	NC_011274	T	6	6	4644786	4644791	0 %	100 %	0 %	0 %	Non-Coding
19502	NC_011274	T	8	8	4644811	4644818	0 %	100 %	0 %	0 %	Non-Coding
19503	NC_011274	T	7	7	4644831	4644837	0 %	100 %	0 %	0 %	Non-Coding
19504	NC_011274	ATT	2	6	4644855	4644860	33.33 %	66.67 %	0 %	0 %	Non-Coding
19505	NC_011274	ATTTT	2	10	4644882	4644891	20 %	80 %	0 %	0 %	Non-Coding
19506	NC_011274	TAA	2	6	4644900	4644905	66.67 %	33.33 %	0 %	0 %	Non-Coding
19507	NC_011274	TCGC	2	8	4645522	4645529	0 %	25 %	25 %	50 %	Non-Coding
19508	NC_011274	CTGC	2	8	4645533	4645540	0 %	25 %	25 %	50 %	Non-Coding
19509	NC_011274	CTG	2	6	4647570	4647575	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19510	NC_011274	GC	4	8	4648955	4648962	0 %	0 %	50 %	50 %	Non-Coding
19511	NC_011274	GTTA	2	8	4649002	4649009	25 %	50 %	25 %	0 %	Non-Coding
19512	NC_011274	GGC	2	6	4649060	4649065	0 %	0 %	66.67 %	33.33 %	Non-Coding
19513	NC_011274	TAG	2	6	4649073	4649078	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19514	NC_011274	CG	3	6	4649079	4649084	0 %	0 %	50 %	50 %	Non-Coding
19515	NC_011274	GGT	2	6	4649096	4649101	0 %	33.33 %	66.67 %	0 %	Non-Coding
19516	NC_011274	CCG	2	6	4649118	4649123	0 %	0 %	33.33 %	66.67 %	Non-Coding
19517	NC_011274	TGG	2	6	4649149	4649154	0 %	33.33 %	66.67 %	0 %	Non-Coding
19518	NC_011274	T	6	6	4649179	4649184	0 %	100 %	0 %	0 %	Non-Coding
19519	NC_011274	GATT	2	8	4649185	4649192	25 %	50 %	25 %	0 %	Non-Coding
19520	NC_011274	GC	3	6	4649269	4649274	0 %	0 %	50 %	50 %	Non-Coding
19521	NC_011274	CCG	2	6	4649398	4649403	0 %	0 %	33.33 %	66.67 %	Non-Coding
19522	NC_011274	CGC	2	6	4649533	4649538	0 %	0 %	33.33 %	66.67 %	Non-Coding
19523	NC_011274	CG	3	6	4649572	4649577	0 %	0 %	50 %	50 %	Non-Coding
19524	NC_011274	GT	3	6	4649666	4649671	0 %	50 %	50 %	0 %	Non-Coding
19525	NC_011274	GGTA	2	8	4649692	4649699	25 %	25 %	50 %	0 %	Non-Coding
19526	NC_011274	GTT	2	6	4649795	4649800	0 %	66.67 %	33.33 %	0 %	Non-Coding
19527	NC_011274	ATTG	2	8	4649813	4649820	25 %	50 %	25 %	0 %	Non-Coding
19528	NC_011274	GC	3	6	4649839	4649844	0 %	0 %	50 %	50 %	Non-Coding
19529	NC_011274	CCAT	2	8	4649889	4649896	25 %	25 %	0 %	50 %	Non-Coding
19530	NC_011274	CGG	2	6	4649943	4649948	0 %	0 %	66.67 %	33.33 %	Non-Coding
19531	NC_011274	AGG	2	6	4649987	4649992	33.33 %	0 %	66.67 %	0 %	Non-Coding
19532	NC_011274	AGC	2	6	4650016	4650021	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19533	NC_011274	CCA	2	6	4650657	4650662	33.33 %	0 %	0 %	66.67 %	Non-Coding
19534	NC_011274	CTG	3	9	4650746	4650754	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19535	NC_011274	TAA	2	6	4650771	4650776	66.67 %	33.33 %	0 %	0 %	Non-Coding
19536	NC_011274	CAA	2	6	4650824	4650829	66.67 %	0 %	0 %	33.33 %	Non-Coding
19537	NC_011274	CTG	2	6	4650832	4650837	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19538	NC_011274	AGACG	2	10	4650858	4650867	40 %	0 %	40 %	20 %	Non-Coding
19539	NC_011274	ACC	2	6	4650955	4650960	33.33 %	0 %	0 %	66.67 %	Non-Coding
19540	NC_011274	T	6	6	4651009	4651014	0 %	100 %	0 %	0 %	Non-Coding
19541	NC_011274	CGT	2	6	4651023	4651028	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19542	NC_011274	ACG	2	6	4651072	4651077	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19543	NC_011274	ATG	2	6	4651156	4651161	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19544	NC_011274	GTC	2	6	4651164	4651169	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19545	NC_011274	CGC	2	6	4651211	4651216	0 %	0 %	33.33 %	66.67 %	Non-Coding
19546	NC_011274	CCG	2	6	4651264	4651269	0 %	0 %	33.33 %	66.67 %	Non-Coding
19547	NC_011274	TGG	2	6	4651316	4651321	0 %	33.33 %	66.67 %	0 %	Non-Coding
19548	NC_011274	GA	3	6	4651360	4651365	50 %	0 %	50 %	0 %	Non-Coding
19549	NC_011274	ATTG	2	8	4651488	4651495	25 %	50 %	25 %	0 %	Non-Coding
19550	NC_011274	TCG	2	6	4651525	4651530	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19551	NC_011274	TGT	2	6	4651601	4651606	0 %	66.67 %	33.33 %	0 %	Non-Coding
19552	NC_011274	ATG	2	6	4651622	4651627	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19553	NC_011274	TA	3	6	4651658	4651663	50 %	50 %	0 %	0 %	Non-Coding
19554	NC_011274	AGTG	2	8	4651665	4651672	25 %	25 %	50 %	0 %	Non-Coding
19555	NC_011274	TAT	2	6	4651742	4651747	33.33 %	66.67 %	0 %	0 %	Non-Coding
19556	NC_011274	GTA	2	6	4651779	4651784	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19557	NC_011274	CAT	2	6	4651997	4652002	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19558	NC_011274	CT	3	6	4652014	4652019	0 %	50 %	0 %	50 %	Non-Coding
19559	NC_011274	GCC	2	6	4652040	4652045	0 %	0 %	33.33 %	66.67 %	Non-Coding
19560	NC_011274	TGA	2	6	4652103	4652108	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19561	NC_011274	CCG	2	6	4652242	4652247	0 %	0 %	33.33 %	66.67 %	Non-Coding
19562	NC_011274	CCG	2	6	4652279	4652284	0 %	0 %	33.33 %	66.67 %	Non-Coding
19563	NC_011274	GC	3	6	4652333	4652338	0 %	0 %	50 %	50 %	Non-Coding
19564	NC_011274	TCA	2	6	4652401	4652406	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19565	NC_011274	AGT	2	6	4652570	4652575	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19566	NC_011274	TCCG	2	8	4652635	4652642	0 %	25 %	25 %	50 %	Non-Coding
19567	NC_011274	TCA	2	6	4652647	4652652	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19568	NC_011274	A	6	6	4652692	4652697	100 %	0 %	0 %	0 %	Non-Coding
19569	NC_011274	GCCA	2	8	4652817	4652824	25 %	0 %	25 %	50 %	Non-Coding
19570	NC_011274	GTT	2	6	4652903	4652908	0 %	66.67 %	33.33 %	0 %	Non-Coding
19571	NC_011274	TTA	2	6	4652938	4652943	33.33 %	66.67 %	0 %	0 %	Non-Coding
19572	NC_011274	CTG	2	6	4652945	4652950	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19573	NC_011274	T	6	6	4652952	4652957	0 %	100 %	0 %	0 %	Non-Coding
19574	NC_011274	T	6	6	4652974	4652979	0 %	100 %	0 %	0 %	Non-Coding
19575	NC_011274	TTA	2	6	4652995	4653000	33.33 %	66.67 %	0 %	0 %	Non-Coding
19576	NC_011274	CTGC	2	8	4653029	4653036	0 %	25 %	25 %	50 %	Non-Coding
19577	NC_011274	C	8	8	4653036	4653043	0 %	0 %	0 %	100 %	Non-Coding
19578	NC_011274	TCA	2	6	4653083	4653088	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19579	NC_011274	AAAGT	2	10	4653226	4653235	60 %	20 %	20 %	0 %	Non-Coding
19580	NC_011274	GGC	2	6	4653325	4653330	0 %	0 %	66.67 %	33.33 %	Non-Coding
19581	NC_011274	TGA	2	6	4653355	4653360	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19582	NC_011274	TAA	2	6	4653453	4653458	66.67 %	33.33 %	0 %	0 %	Non-Coding
19583	NC_011274	TTG	2	6	4653484	4653489	0 %	66.67 %	33.33 %	0 %	Non-Coding
19584	NC_011274	AT	3	6	4653532	4653537	50 %	50 %	0 %	0 %	Non-Coding
19585	NC_011274	ATC	2	6	4653589	4653594	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19586	NC_011274	G	6	6	4653651	4653656	0 %	0 %	100 %	0 %	Non-Coding
19587	NC_011274	ATA	2	6	4653722	4653727	66.67 %	33.33 %	0 %	0 %	Non-Coding
19588	NC_011274	ATTG	2	8	4653811	4653818	25 %	50 %	25 %	0 %	Non-Coding
19589	NC_011274	TCA	2	6	4653824	4653829	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19590	NC_011274	CAA	3	9	4653861	4653869	66.67 %	0 %	0 %	33.33 %	Non-Coding
19591	NC_011274	T	6	6	4653933	4653938	0 %	100 %	0 %	0 %	Non-Coding
19592	NC_011274	CCTG	2	8	4653974	4653981	0 %	25 %	25 %	50 %	Non-Coding
19593	NC_011274	TTG	2	6	4654555	4654560	0 %	66.67 %	33.33 %	0 %	Non-Coding
19594	NC_011274	TA	3	6	4654593	4654598	50 %	50 %	0 %	0 %	Non-Coding
19595	NC_011274	AAATA	2	10	4654599	4654608	80 %	20 %	0 %	0 %	Non-Coding
19596	NC_011274	CTT	2	6	4654630	4654635	0 %	66.67 %	0 %	33.33 %	Non-Coding
19597	NC_011274	TCTGT	2	10	4654636	4654645	0 %	60 %	20 %	20 %	Non-Coding
19598	NC_011274	GGC	2	6	4654655	4654660	0 %	0 %	66.67 %	33.33 %	Non-Coding
19599	NC_011274	TAA	2	6	4654747	4654752	66.67 %	33.33 %	0 %	0 %	Non-Coding
19600	NC_011274	AAG	2	6	4654763	4654768	66.67 %	0 %	33.33 %	0 %	Non-Coding
19601	NC_011274	TGA	2	6	4654775	4654780	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19602	NC_011274	T	6	6	4654804	4654809	0 %	100 %	0 %	0 %	Non-Coding
19603	NC_011274	ATA	2	6	4654811	4654816	66.67 %	33.33 %	0 %	0 %	Non-Coding
19604	NC_011274	TTA	2	6	4654818	4654823	33.33 %	66.67 %	0 %	0 %	Non-Coding
19605	NC_011274	GGA	2	6	4654830	4654835	33.33 %	0 %	66.67 %	0 %	Non-Coding
19606	NC_011274	TTTA	2	8	4654836	4654843	25 %	75 %	0 %	0 %	Non-Coding
19607	NC_011274	ACG	2	6	4654873	4654878	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19608	NC_011274	ATT	2	6	4655569	4655574	33.33 %	66.67 %	0 %	0 %	Non-Coding
19609	NC_011274	CAA	2	6	4655659	4655664	66.67 %	0 %	0 %	33.33 %	Non-Coding
19610	NC_011274	TGA	2	6	4655741	4655746	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19611	NC_011274	AGCGA	2	10	4655818	4655827	40 %	0 %	40 %	20 %	Non-Coding
19612	NC_011274	TGT	2	6	4655838	4655843	0 %	66.67 %	33.33 %	0 %	Non-Coding
19613	NC_011274	GA	3	6	4655855	4655860	50 %	0 %	50 %	0 %	Non-Coding
19614	NC_011274	GGCG	2	8	4655876	4655883	0 %	0 %	75 %	25 %	Non-Coding
19615	NC_011274	CGC	2	6	4655903	4655908	0 %	0 %	33.33 %	66.67 %	Non-Coding
19616	NC_011274	CTC	2	6	4655918	4655923	0 %	33.33 %	0 %	66.67 %	Non-Coding
19617	NC_011274	CGG	2	6	4655925	4655930	0 %	0 %	66.67 %	33.33 %	Non-Coding
19618	NC_011274	T	6	6	4656294	4656299	0 %	100 %	0 %	0 %	Non-Coding
19619	NC_011274	CAA	2	6	4656306	4656311	66.67 %	0 %	0 %	33.33 %	Non-Coding
19620	NC_011274	AGG	2	6	4656427	4656432	33.33 %	0 %	66.67 %	0 %	Non-Coding
19621	NC_011274	CCTG	2	8	4657296	4657303	0 %	25 %	25 %	50 %	Non-Coding
19622	NC_011274	TAA	2	6	4657501	4657506	66.67 %	33.33 %	0 %	0 %	Non-Coding
19623	NC_011274	AT	3	6	4657524	4657529	50 %	50 %	0 %	0 %	Non-Coding
19624	NC_011274	TGA	2	6	4657558	4657563	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19625	NC_011274	ATC	2	6	4657565	4657570	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19626	NC_011274	TCA	2	6	4657589	4657594	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19627	NC_011274	TAA	2	6	4657632	4657637	66.67 %	33.33 %	0 %	0 %	Non-Coding
19628	NC_011274	TGA	2	6	4657641	4657646	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19629	NC_011274	TAAAT	2	10	4657669	4657678	60 %	40 %	0 %	0 %	Non-Coding
19630	NC_011274	TAAA	2	8	4657684	4657691	75 %	25 %	0 %	0 %	Non-Coding
19631	NC_011274	ATA	2	6	4658582	4658587	66.67 %	33.33 %	0 %	0 %	Non-Coding
19632	NC_011274	AT	3	6	4658642	4658647	50 %	50 %	0 %	0 %	Non-Coding
19633	NC_011274	CAG	2	6	4658651	4658656	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.