MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Staphylothermus marinus F1 chromosome

Total Repeats: 5581

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
5501	NC_009033	GAA	2	6	1557775	1557780	66.67 %	0 %	33.33 %	0 %	Non-Coding
5502	NC_009033	AT	3	6	1557782	1557787	50 %	50 %	0 %	0 %	Non-Coding
5503	NC_009033	TGT	2	6	1557820	1557825	0 %	66.67 %	33.33 %	0 %	Non-Coding
5504	NC_009033	GGA	2	6	1557872	1557877	33.33 %	0 %	66.67 %	0 %	Non-Coding
5505	NC_009033	TGA	2	6	1557905	1557910	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5506	NC_009033	ATT	2	6	1558644	1558649	33.33 %	66.67 %	0 %	0 %	Non-Coding
5507	NC_009033	TG	3	6	1558666	1558671	0 %	50 %	50 %	0 %	Non-Coding
5508	NC_009033	TAGG	2	8	1558720	1558727	25 %	25 %	50 %	0 %	Non-Coding
5509	NC_009033	GGA	2	6	1558746	1558751	33.33 %	0 %	66.67 %	0 %	Non-Coding
5510	NC_009033	AT	3	6	1559493	1559498	50 %	50 %	0 %	0 %	Non-Coding
5511	NC_009033	TA	3	6	1559556	1559561	50 %	50 %	0 %	0 %	Non-Coding
5512	NC_009033	TAG	2	6	1561566	1561571	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5513	NC_009033	ATT	2	6	1563701	1563706	33.33 %	66.67 %	0 %	0 %	Non-Coding
5514	NC_009033	AT	3	6	1563715	1563720	50 %	50 %	0 %	0 %	Non-Coding
5515	NC_009033	ATTT	2	8	1563756	1563763	25 %	75 %	0 %	0 %	Non-Coding
5516	NC_009033	TC	3	6	1563793	1563798	0 %	50 %	0 %	50 %	Non-Coding
5517	NC_009033	TCT	2	6	1563819	1563824	0 %	66.67 %	0 %	33.33 %	Non-Coding
5518	NC_009033	AAG	2	6	1563846	1563851	66.67 %	0 %	33.33 %	0 %	Non-Coding
5519	NC_009033	AT	3	6	1563854	1563859	50 %	50 %	0 %	0 %	Non-Coding
5520	NC_009033	ATT	2	6	1563897	1563902	33.33 %	66.67 %	0 %	0 %	Non-Coding
5521	NC_009033	AT	3	6	1564025	1564030	50 %	50 %	0 %	0 %	Non-Coding
5522	NC_009033	ACA	2	6	1564048	1564053	66.67 %	0 %	0 %	33.33 %	Non-Coding
5523	NC_009033	AGAT	2	8	1564072	1564079	50 %	25 %	25 %	0 %	Non-Coding
5524	NC_009033	TCC	2	6	1564085	1564090	0 %	33.33 %	0 %	66.67 %	Non-Coding
5525	NC_009033	TCCA	2	8	1564134	1564141	25 %	25 %	0 %	50 %	Non-Coding
5526	NC_009033	ATCC	2	8	1564190	1564197	25 %	25 %	0 %	50 %	Non-Coding
5527	NC_009033	TG	3	6	1564200	1564205	0 %	50 %	50 %	0 %	Non-Coding
5528	NC_009033	TTCT	2	8	1564226	1564233	0 %	75 %	0 %	25 %	Non-Coding
5529	NC_009033	TGT	2	6	1564235	1564240	0 %	66.67 %	33.33 %	0 %	Non-Coding
5530	NC_009033	TGG	2	6	1564254	1564259	0 %	33.33 %	66.67 %	0 %	Non-Coding
5531	NC_009033	CT	3	6	1564271	1564276	0 %	50 %	0 %	50 %	Non-Coding
5532	NC_009033	TTCT	2	8	1564289	1564296	0 %	75 %	0 %	25 %	Non-Coding
5533	NC_009033	GTT	2	6	1564299	1564304	0 %	66.67 %	33.33 %	0 %	Non-Coding
5534	NC_009033	AATA	2	8	1564308	1564315	75 %	25 %	0 %	0 %	Non-Coding
5535	NC_009033	TA	3	6	1564314	1564319	50 %	50 %	0 %	0 %	Non-Coding
5536	NC_009033	TTCT	2	8	1564353	1564360	0 %	75 %	0 %	25 %	Non-Coding
5537	NC_009033	GTT	2	6	1564363	1564368	0 %	66.67 %	33.33 %	0 %	Non-Coding
5538	NC_009033	CTT	2	6	1564407	1564412	0 %	66.67 %	0 %	33.33 %	Non-Coding
5539	NC_009033	TTCT	2	8	1564417	1564424	0 %	75 %	0 %	25 %	Non-Coding
5540	NC_009033	GTT	2	6	1564427	1564432	0 %	66.67 %	33.33 %	0 %	Non-Coding
5541	NC_009033	AAC	3	9	1564448	1564456	66.67 %	0 %	0 %	33.33 %	Non-Coding
5542	NC_009033	TTCT	2	8	1564481	1564488	0 %	75 %	0 %	25 %	Non-Coding
5543	NC_009033	GTT	2	6	1564491	1564496	0 %	66.67 %	33.33 %	0 %	Non-Coding
5544	NC_009033	ATT	2	6	1564509	1564514	33.33 %	66.67 %	0 %	0 %	Non-Coding
5545	NC_009033	TA	3	6	1564545	1564550	50 %	50 %	0 %	0 %	Non-Coding
5546	NC_009033	T	6	6	1564660	1564665	0 %	100 %	0 %	0 %	Non-Coding
5547	NC_009033	TGT	2	6	1564671	1564676	0 %	66.67 %	33.33 %	0 %	Non-Coding
5548	NC_009033	TA	4	8	1564710	1564717	50 %	50 %	0 %	0 %	Non-Coding
5549	NC_009033	TGG	3	9	1564719	1564727	0 %	33.33 %	66.67 %	0 %	Non-Coding
5550	NC_009033	GCG	2	6	1565870	1565875	0 %	0 %	66.67 %	33.33 %	Non-Coding
5551	NC_009033	CA	3	6	1566747	1566752	50 %	0 %	0 %	50 %	Non-Coding
5552	NC_009033	TTG	2	6	1566759	1566764	0 %	66.67 %	33.33 %	0 %	Non-Coding
5553	NC_009033	ATGC	2	8	1567638	1567645	25 %	25 %	25 %	25 %	Non-Coding
5554	NC_009033	A	6	6	1567736	1567741	100 %	0 %	0 %	0 %	Non-Coding
5555	NC_009033	AAAC	2	8	1569254	1569261	75 %	0 %	0 %	25 %	Non-Coding
5556	NC_009033	AAT	2	6	1569263	1569268	66.67 %	33.33 %	0 %	0 %	Non-Coding
5557	NC_009033	AAC	2	6	1569279	1569284	66.67 %	0 %	0 %	33.33 %	Non-Coding
5558	NC_009033	CAAA	2	8	1569291	1569298	75 %	0 %	0 %	25 %	Non-Coding
5559	NC_009033	A	6	6	1569296	1569301	100 %	0 %	0 %	0 %	Non-Coding
5560	NC_009033	TAA	2	6	1569321	1569326	66.67 %	33.33 %	0 %	0 %	Non-Coding
5561	NC_009033	TAT	2	6	1569422	1569427	33.33 %	66.67 %	0 %	0 %	Non-Coding
5562	NC_009033	TGT	2	6	1569464	1569469	0 %	66.67 %	33.33 %	0 %	Non-Coding
5563	NC_009033	GAA	2	6	1569624	1569629	66.67 %	0 %	33.33 %	0 %	Non-Coding
5564	NC_009033	AGG	2	6	1569648	1569653	33.33 %	0 %	66.67 %	0 %	Non-Coding
5565	NC_009033	AGAGTT	2	12	1569654	1569665	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5566	NC_009033	AG	3	6	1569672	1569677	50 %	0 %	50 %	0 %	Non-Coding
5567	NC_009033	TTC	2	6	1569695	1569700	0 %	66.67 %	0 %	33.33 %	Non-Coding
5568	NC_009033	GAG	2	6	1569722	1569727	33.33 %	0 %	66.67 %	0 %	Non-Coding
5569	NC_009033	ATT	2	6	1569751	1569756	33.33 %	66.67 %	0 %	0 %	Non-Coding
5570	NC_009033	TTG	2	6	1569765	1569770	0 %	66.67 %	33.33 %	0 %	Non-Coding
5571	NC_009033	AGA	2	6	1569775	1569780	66.67 %	0 %	33.33 %	0 %	Non-Coding
5572	NC_009033	TCT	2	6	1569881	1569886	0 %	66.67 %	0 %	33.33 %	Non-Coding
5573	NC_009033	CTA	2	6	1569893	1569898	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5574	NC_009033	ATT	2	6	1569938	1569943	33.33 %	66.67 %	0 %	0 %	Non-Coding
5575	NC_009033	AT	3	6	1569983	1569988	50 %	50 %	0 %	0 %	Non-Coding
5576	NC_009033	CTAG	2	8	1570007	1570014	25 %	25 %	25 %	25 %	Non-Coding
5577	NC_009033	AAC	2	6	1570050	1570055	66.67 %	0 %	0 %	33.33 %	Non-Coding
5578	NC_009033	AAT	2	6	1570125	1570130	66.67 %	33.33 %	0 %	0 %	Non-Coding
5579	NC_009033	T	7	7	1570139	1570145	0 %	100 %	0 %	0 %	Non-Coding
5580	NC_009033	TATT	2	8	1570171	1570178	25 %	75 %	0 %	0 %	Non-Coding
5581	NC_009033	GTT	2	6	1570183	1570188	0 %	66.67 %	33.33 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.