MICAS: Microsatellite Analysis Server 3.0

All Coding Repeats of Shewanella baltica OS195 chromosome

Total Repeats: 78595

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
78501	NC_009997	GA	3	6	5341584	5341589	50 %	0 %	50 %	0 %	160877619
78502	NC_009997	ATCG	2	8	5341591	5341598	25 %	25 %	25 %	25 %	160877619
78503	NC_009997	TGG	2	6	5341687	5341692	0 %	33.33 %	66.67 %	0 %	160877619
78504	NC_009997	TGT	2	6	5341759	5341764	0 %	66.67 %	33.33 %	0 %	160877619
78505	NC_009997	TGA	2	6	5341823	5341828	33.33 %	33.33 %	33.33 %	0 %	160877619
78506	NC_009997	CAA	2	6	5341833	5341838	66.67 %	0 %	0 %	33.33 %	160877619
78507	NC_009997	TCA	2	6	5341844	5341849	33.33 %	33.33 %	0 %	33.33 %	160877619
78508	NC_009997	TTG	2	6	5341855	5341860	0 %	66.67 %	33.33 %	0 %	160877619
78509	NC_009997	GGTT	2	8	5341877	5341884	0 %	50 %	50 %	0 %	160877619
78510	NC_009997	T	6	6	5341902	5341907	0 %	100 %	0 %	0 %	160877619
78511	NC_009997	CTG	2	6	5341950	5341955	0 %	33.33 %	33.33 %	33.33 %	160877619
78512	NC_009997	TTTC	2	8	5342037	5342044	0 %	75 %	0 %	25 %	160877619
78513	NC_009997	GCC	2	6	5342065	5342070	0 %	0 %	33.33 %	66.67 %	160877619
78514	NC_009997	TAA	2	6	5342122	5342127	66.67 %	33.33 %	0 %	0 %	160877619
78515	NC_009997	TGC	3	9	5342146	5342154	0 %	33.33 %	33.33 %	33.33 %	160877619
78516	NC_009997	ACC	3	9	5342179	5342187	33.33 %	0 %	0 %	66.67 %	160877619
78517	NC_009997	AAC	2	6	5342188	5342193	66.67 %	0 %	0 %	33.33 %	160877619
78518	NC_009997	ATGC	2	8	5342218	5342225	25 %	25 %	25 %	25 %	160877619
78519	NC_009997	TCT	2	6	5342706	5342711	0 %	66.67 %	0 %	33.33 %	160877620
78520	NC_009997	AATT	2	8	5342786	5342793	50 %	50 %	0 %	0 %	160877620
78521	NC_009997	CA	3	6	5342977	5342982	50 %	0 %	0 %	50 %	160877620
78522	NC_009997	CAT	2	6	5343035	5343040	33.33 %	33.33 %	0 %	33.33 %	160877620
78523	NC_009997	TCG	2	6	5343042	5343047	0 %	33.33 %	33.33 %	33.33 %	160877620
78524	NC_009997	TGT	2	6	5343071	5343076	0 %	66.67 %	33.33 %	0 %	160877620
78525	NC_009997	CAG	2	6	5343478	5343483	33.33 %	0 %	33.33 %	33.33 %	160877621
78526	NC_009997	GAC	3	9	5343561	5343569	33.33 %	0 %	33.33 %	33.33 %	160877621
78527	NC_009997	TTC	2	6	5343634	5343639	0 %	66.67 %	0 %	33.33 %	160877621
78528	NC_009997	TTC	2	6	5343688	5343693	0 %	66.67 %	0 %	33.33 %	160877621
78529	NC_009997	TCA	2	6	5343696	5343701	33.33 %	33.33 %	0 %	33.33 %	160877621
78530	NC_009997	TTA	2	6	5343728	5343733	33.33 %	66.67 %	0 %	0 %	160877621
78531	NC_009997	CGG	2	6	5343804	5343809	0 %	0 %	66.67 %	33.33 %	160877621
78532	NC_009997	TGT	2	6	5343811	5343816	0 %	66.67 %	33.33 %	0 %	160877621
78533	NC_009997	CCA	2	6	5343825	5343830	33.33 %	0 %	0 %	66.67 %	160877621
78534	NC_009997	AAT	2	6	5343928	5343933	66.67 %	33.33 %	0 %	0 %	160877621
78535	NC_009997	TGT	2	6	5343982	5343987	0 %	66.67 %	33.33 %	0 %	160877621
78536	NC_009997	GAC	2	6	5344062	5344067	33.33 %	0 %	33.33 %	33.33 %	160877621
78537	NC_009997	CAC	2	6	5344075	5344080	33.33 %	0 %	0 %	66.67 %	160877621
78538	NC_009997	CTTG	2	8	5344107	5344114	0 %	50 %	25 %	25 %	160877621
78539	NC_009997	GAT	2	6	5344144	5344149	33.33 %	33.33 %	33.33 %	0 %	160877621
78540	NC_009997	CTT	2	6	5344194	5344199	0 %	66.67 %	0 %	33.33 %	160877621
78541	NC_009997	CCA	2	6	5344254	5344259	33.33 %	0 %	0 %	66.67 %	160877621
78542	NC_009997	TGG	2	6	5344326	5344331	0 %	33.33 %	66.67 %	0 %	160877621
78543	NC_009997	GCC	2	6	5344477	5344482	0 %	0 %	33.33 %	66.67 %	160877621
78544	NC_009997	A	6	6	5344534	5344539	100 %	0 %	0 %	0 %	160877621
78545	NC_009997	AAT	2	6	5344590	5344595	66.67 %	33.33 %	0 %	0 %	160877621
78546	NC_009997	ATG	2	6	5344670	5344675	33.33 %	33.33 %	33.33 %	0 %	160877621
78547	NC_009997	CGC	2	6	5344680	5344685	0 %	0 %	33.33 %	66.67 %	160877621
78548	NC_009997	T	6	6	5344871	5344876	0 %	100 %	0 %	0 %	160877622
78549	NC_009997	ATAA	2	8	5344889	5344896	75 %	25 %	0 %	0 %	160877622
78550	NC_009997	TCT	2	6	5344897	5344902	0 %	66.67 %	0 %	33.33 %	160877622
78551	NC_009997	CAGTA	2	10	5344935	5344944	40 %	20 %	20 %	20 %	160877622
78552	NC_009997	GAA	2	6	5344967	5344972	66.67 %	0 %	33.33 %	0 %	160877622
78553	NC_009997	CAT	2	6	5345000	5345005	33.33 %	33.33 %	0 %	33.33 %	160877622
78554	NC_009997	TCT	2	6	5345047	5345052	0 %	66.67 %	0 %	33.33 %	160877622
78555	NC_009997	GTA	2	6	5345093	5345098	33.33 %	33.33 %	33.33 %	0 %	160877622
78556	NC_009997	ATA	2	6	5345208	5345213	66.67 %	33.33 %	0 %	0 %	160877622
78557	NC_009997	TCTT	2	8	5345244	5345251	0 %	75 %	0 %	25 %	160877622
78558	NC_009997	CAT	2	6	5345261	5345266	33.33 %	33.33 %	0 %	33.33 %	160877622
78559	NC_009997	TCA	2	6	5345289	5345294	33.33 %	33.33 %	0 %	33.33 %	160877622
78560	NC_009997	AGTC	2	8	5345311	5345318	25 %	25 %	25 %	25 %	160877622
78561	NC_009997	AAT	2	6	5345411	5345416	66.67 %	33.33 %	0 %	0 %	160877622
78562	NC_009997	CGA	2	6	5345434	5345439	33.33 %	0 %	33.33 %	33.33 %	160877622
78563	NC_009997	TGAT	2	8	5345441	5345448	25 %	50 %	25 %	0 %	160877622
78564	NC_009997	ACC	2	6	5345482	5345487	33.33 %	0 %	0 %	66.67 %	160877622
78565	NC_009997	CCGCG	2	10	5345614	5345623	0 %	0 %	40 %	60 %	160877622
78566	NC_009997	CCGC	2	8	5345643	5345650	0 %	0 %	25 %	75 %	160877622
78567	NC_009997	TGG	2	6	5345687	5345692	0 %	33.33 %	66.67 %	0 %	160877622
78568	NC_009997	TGT	2	6	5345715	5345720	0 %	66.67 %	33.33 %	0 %	160877622
78569	NC_009997	TCA	2	6	5345775	5345780	33.33 %	33.33 %	0 %	33.33 %	160877622
78570	NC_009997	CAC	3	9	5345821	5345829	33.33 %	0 %	0 %	66.67 %	160877622
78571	NC_009997	GGTA	2	8	5345830	5345837	25 %	25 %	50 %	0 %	160877622
78572	NC_009997	TGC	2	6	5345848	5345853	0 %	33.33 %	33.33 %	33.33 %	160877622
78573	NC_009997	GTTT	2	8	5345871	5345878	0 %	75 %	25 %	0 %	160877622
78574	NC_009997	GTT	2	6	5345921	5345926	0 %	66.67 %	33.33 %	0 %	160877622
78575	NC_009997	TA	3	6	5346137	5346142	50 %	50 %	0 %	0 %	160877622
78576	NC_009997	TG	3	6	5346202	5346207	0 %	50 %	50 %	0 %	160877622
78577	NC_009997	GCA	2	6	5346216	5346221	33.33 %	0 %	33.33 %	33.33 %	160877622
78578	NC_009997	CTG	2	6	5346304	5346309	0 %	33.33 %	33.33 %	33.33 %	160877622
78579	NC_009997	TG	3	6	5346346	5346351	0 %	50 %	50 %	0 %	160877622
78580	NC_009997	AGT	2	6	5346447	5346452	33.33 %	33.33 %	33.33 %	0 %	160877622
78581	NC_009997	AT	3	6	5346463	5346468	50 %	50 %	0 %	0 %	160877622
78582	NC_009997	TATT	2	8	5346489	5346496	25 %	75 %	0 %	0 %	160877623
78583	NC_009997	G	6	6	5346513	5346518	0 %	0 %	100 %	0 %	160877623
78584	NC_009997	CCG	2	6	5346531	5346536	0 %	0 %	33.33 %	66.67 %	160877623
78585	NC_009997	CAA	2	6	5346579	5346584	66.67 %	0 %	0 %	33.33 %	160877623
78586	NC_009997	GCG	2	6	5346721	5346726	0 %	0 %	66.67 %	33.33 %	160877623
78587	NC_009997	TTG	2	6	5346758	5346763	0 %	66.67 %	33.33 %	0 %	160877624
78588	NC_009997	TTTCCA	2	12	5346774	5346785	16.67 %	50 %	0 %	33.33 %	160877624
78589	NC_009997	CAA	2	6	5346807	5346812	66.67 %	0 %	0 %	33.33 %	160877624
78590	NC_009997	TGT	2	6	5346935	5346940	0 %	66.67 %	33.33 %	0 %	160877624
78591	NC_009997	CAG	2	6	5346972	5346977	33.33 %	0 %	33.33 %	33.33 %	160877624
78592	NC_009997	TTA	2	6	5347078	5347083	33.33 %	66.67 %	0 %	0 %	160877625
78593	NC_009997	ACG	3	9	5347111	5347119	33.33 %	0 %	33.33 %	33.33 %	160877625
78594	NC_009997	GCC	2	6	5347135	5347140	0 %	0 %	33.33 %	66.67 %	160877625
78595	NC_009997	ATG	2	6	5347217	5347222	33.33 %	33.33 %	33.33 %	0 %	160877625

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.