MICAS: Microsatellite Analysis Server 3.0

All Repeats of Streptococcus pyogenes MGAS1882 chromosome

Total Repeats: 38070

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
38001	NC_017053	TGA	2	6	1778324	1778329	33.33 %	33.33 %	33.33 %	0 %	383494821
38002	NC_017053	T	7	7	1778370	1778376	0 %	100 %	0 %	0 %	383494821
38003	NC_017053	AAT	2	6	1778377	1778382	66.67 %	33.33 %	0 %	0 %	383494821
38004	NC_017053	CCA	2	6	1778402	1778407	33.33 %	0 %	0 %	66.67 %	383494821
38005	NC_017053	ATA	2	6	1778408	1778413	66.67 %	33.33 %	0 %	0 %	383494821
38006	NC_017053	T	7	7	1778529	1778535	0 %	100 %	0 %	0 %	383494821
38007	NC_017053	CTT	2	6	1778550	1778555	0 %	66.67 %	0 %	33.33 %	383494821
38008	NC_017053	TCA	2	6	1778606	1778611	33.33 %	33.33 %	0 %	33.33 %	383494821
38009	NC_017053	T	6	6	1778652	1778657	0 %	100 %	0 %	0 %	383494821
38010	NC_017053	TCTT	2	8	1778686	1778693	0 %	75 %	0 %	25 %	383494821
38011	NC_017053	ACT	2	6	1778791	1778796	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38012	NC_017053	TTA	2	6	1778822	1778827	33.33 %	66.67 %	0 %	0 %	Non-Coding
38013	NC_017053	AAAAG	2	10	1778831	1778840	80 %	0 %	20 %	0 %	Non-Coding
38014	NC_017053	CTTTT	2	10	1778862	1778871	0 %	80 %	0 %	20 %	Non-Coding
38015	NC_017053	T	8	8	1778868	1778875	0 %	100 %	0 %	0 %	Non-Coding
38016	NC_017053	GGA	2	6	1778927	1778932	33.33 %	0 %	66.67 %	0 %	Non-Coding
38017	NC_017053	AGG	2	6	1778995	1779000	33.33 %	0 %	66.67 %	0 %	383494822
38018	NC_017053	ATT	2	6	1779011	1779016	33.33 %	66.67 %	0 %	0 %	383494822
38019	NC_017053	AAT	2	6	1779023	1779028	66.67 %	33.33 %	0 %	0 %	383494822
38020	NC_017053	AAAT	2	8	1779051	1779058	75 %	25 %	0 %	0 %	383494822
38021	NC_017053	CAA	2	6	1779069	1779074	66.67 %	0 %	0 %	33.33 %	383494822
38022	NC_017053	AAC	2	6	1779092	1779097	66.67 %	0 %	0 %	33.33 %	383494822
38023	NC_017053	TAC	2	6	1779106	1779111	33.33 %	33.33 %	0 %	33.33 %	383494822
38024	NC_017053	TTA	2	6	1779150	1779155	33.33 %	66.67 %	0 %	0 %	383494822
38025	NC_017053	CTT	2	6	1779171	1779176	0 %	66.67 %	0 %	33.33 %	383494822
38026	NC_017053	GTT	2	6	1779305	1779310	0 %	66.67 %	33.33 %	0 %	383494822
38027	NC_017053	TAA	2	6	1779313	1779318	66.67 %	33.33 %	0 %	0 %	383494822
38028	NC_017053	GTT	2	6	1779374	1779379	0 %	66.67 %	33.33 %	0 %	383494822
38029	NC_017053	TGT	2	6	1779418	1779423	0 %	66.67 %	33.33 %	0 %	383494822
38030	NC_017053	AGATA	2	10	1779436	1779445	60 %	20 %	20 %	0 %	383494822
38031	NC_017053	TTGCTA	2	12	1779495	1779506	16.67 %	50 %	16.67 %	16.67 %	383494822
38032	NC_017053	A	6	6	1779586	1779591	100 %	0 %	0 %	0 %	383494822
38033	NC_017053	CAA	2	6	1779612	1779617	66.67 %	0 %	0 %	33.33 %	383494822
38034	NC_017053	CAGA	2	8	1779626	1779633	50 %	0 %	25 %	25 %	383494822
38035	NC_017053	TGC	2	6	1779634	1779639	0 %	33.33 %	33.33 %	33.33 %	383494822
38036	NC_017053	TGG	2	6	1779658	1779663	0 %	33.33 %	66.67 %	0 %	383494822
38037	NC_017053	TAAT	2	8	1779669	1779676	50 %	50 %	0 %	0 %	383494822
38038	NC_017053	AATT	2	8	1779697	1779704	50 %	50 %	0 %	0 %	383494822
38039	NC_017053	TCT	2	6	1779716	1779721	0 %	66.67 %	0 %	33.33 %	383494822
38040	NC_017053	GTG	2	6	1779747	1779752	0 %	33.33 %	66.67 %	0 %	383494822
38041	NC_017053	TTA	2	6	1779792	1779797	33.33 %	66.67 %	0 %	0 %	383494822
38042	NC_017053	ATT	2	6	1779800	1779805	33.33 %	66.67 %	0 %	0 %	383494822
38043	NC_017053	AAC	2	6	1779807	1779812	66.67 %	0 %	0 %	33.33 %	383494822
38044	NC_017053	TGG	2	6	1779922	1779927	0 %	33.33 %	66.67 %	0 %	383494822
38045	NC_017053	GTA	2	6	1779932	1779937	33.33 %	33.33 %	33.33 %	0 %	383494822
38046	NC_017053	AAGG	2	8	1779947	1779954	50 %	0 %	50 %	0 %	383494822
38047	NC_017053	AGT	2	6	1780040	1780045	33.33 %	33.33 %	33.33 %	0 %	383494822
38048	NC_017053	A	6	6	1780106	1780111	100 %	0 %	0 %	0 %	383494822
38049	NC_017053	ACT	2	6	1780133	1780138	33.33 %	33.33 %	0 %	33.33 %	383494822
38050	NC_017053	ATT	2	6	1780262	1780267	33.33 %	66.67 %	0 %	0 %	383494823
38051	NC_017053	TAT	2	6	1780385	1780390	33.33 %	66.67 %	0 %	0 %	383494823
38052	NC_017053	AGTT	2	8	1780420	1780427	25 %	50 %	25 %	0 %	383494823
38053	NC_017053	ACG	2	6	1780436	1780441	33.33 %	0 %	33.33 %	33.33 %	383494823
38054	NC_017053	A	7	7	1780469	1780475	100 %	0 %	0 %	0 %	383494823
38055	NC_017053	ATC	2	6	1780485	1780490	33.33 %	33.33 %	0 %	33.33 %	383494823
38056	NC_017053	AAG	2	6	1780491	1780496	66.67 %	0 %	33.33 %	0 %	383494823
38057	NC_017053	CAA	2	6	1780518	1780523	66.67 %	0 %	0 %	33.33 %	383494823
38058	NC_017053	GAA	2	6	1780566	1780571	66.67 %	0 %	33.33 %	0 %	383494823
38059	NC_017053	A	8	8	1780597	1780604	100 %	0 %	0 %	0 %	383494823
38060	NC_017053	AT	3	6	1780631	1780636	50 %	50 %	0 %	0 %	383494823
38061	NC_017053	GAA	2	6	1780710	1780715	66.67 %	0 %	33.33 %	0 %	383494823
38062	NC_017053	CG	3	6	1780736	1780741	0 %	0 %	50 %	50 %	383494823
38063	NC_017053	TGA	2	6	1780760	1780765	33.33 %	33.33 %	33.33 %	0 %	383494823
38064	NC_017053	CAA	2	6	1780770	1780775	66.67 %	0 %	0 %	33.33 %	383494823
38065	NC_017053	CTCA	2	8	1780782	1780789	25 %	25 %	0 %	50 %	383494823
38066	NC_017053	A	7	7	1780866	1780872	100 %	0 %	0 %	0 %	383494823
38067	NC_017053	CTT	2	6	1780891	1780896	0 %	66.67 %	0 %	33.33 %	383494823
38068	NC_017053	CT	3	6	1780926	1780931	0 %	50 %	0 %	50 %	383494823
38069	NC_017053	ATG	3	9	1780987	1780995	33.33 %	33.33 %	33.33 %	0 %	383494823
38070	NC_017053	CAA	2	6	1781012	1781017	66.67 %	0 %	0 %	33.33 %	383494823

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.