MICAS: Microsatellite Analysis Server 3.0

All Repeats of Streptococcus pyogenes MGAS2096 chromosome

Total Repeats: 39561

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
39501	NC_008023	CTTTT	2	10	1858159	1858168	0 %	80 %	0 %	20 %	Non-Coding
39502	NC_008023	T	8	8	1858165	1858172	0 %	100 %	0 %	0 %	Non-Coding
39503	NC_008023	GGA	2	6	1858224	1858229	33.33 %	0 %	66.67 %	0 %	Non-Coding
39504	NC_008023	AGG	2	6	1858292	1858297	33.33 %	0 %	66.67 %	0 %	94993394
39505	NC_008023	ATT	2	6	1858308	1858313	33.33 %	66.67 %	0 %	0 %	94993394
39506	NC_008023	AAT	2	6	1858320	1858325	66.67 %	33.33 %	0 %	0 %	94993394
39507	NC_008023	AAAT	2	8	1858348	1858355	75 %	25 %	0 %	0 %	94993394
39508	NC_008023	CAA	2	6	1858366	1858371	66.67 %	0 %	0 %	33.33 %	94993394
39509	NC_008023	AAC	2	6	1858389	1858394	66.67 %	0 %	0 %	33.33 %	94993394
39510	NC_008023	TAC	2	6	1858403	1858408	33.33 %	33.33 %	0 %	33.33 %	94993394
39511	NC_008023	TTA	2	6	1858447	1858452	33.33 %	66.67 %	0 %	0 %	94993394
39512	NC_008023	CTT	2	6	1858468	1858473	0 %	66.67 %	0 %	33.33 %	94993394
39513	NC_008023	GTT	2	6	1858602	1858607	0 %	66.67 %	33.33 %	0 %	94993394
39514	NC_008023	TAA	2	6	1858610	1858615	66.67 %	33.33 %	0 %	0 %	94993394
39515	NC_008023	GTT	2	6	1858671	1858676	0 %	66.67 %	33.33 %	0 %	94993394
39516	NC_008023	TGT	2	6	1858715	1858720	0 %	66.67 %	33.33 %	0 %	94993394
39517	NC_008023	AGATA	2	10	1858733	1858742	60 %	20 %	20 %	0 %	94993394
39518	NC_008023	TTGCTA	2	12	1858792	1858803	16.67 %	50 %	16.67 %	16.67 %	94993394
39519	NC_008023	A	6	6	1858883	1858888	100 %	0 %	0 %	0 %	94993394
39520	NC_008023	CAA	2	6	1858909	1858914	66.67 %	0 %	0 %	33.33 %	94993394
39521	NC_008023	CAGA	2	8	1858923	1858930	50 %	0 %	25 %	25 %	94993394
39522	NC_008023	TGC	2	6	1858931	1858936	0 %	33.33 %	33.33 %	33.33 %	94993394
39523	NC_008023	TGG	2	6	1858955	1858960	0 %	33.33 %	66.67 %	0 %	94993394
39524	NC_008023	TAAT	2	8	1858966	1858973	50 %	50 %	0 %	0 %	94993394
39525	NC_008023	AATT	2	8	1858994	1859001	50 %	50 %	0 %	0 %	94993394
39526	NC_008023	TCT	2	6	1859013	1859018	0 %	66.67 %	0 %	33.33 %	94993394
39527	NC_008023	GTG	2	6	1859044	1859049	0 %	33.33 %	66.67 %	0 %	94993394
39528	NC_008023	TTA	2	6	1859089	1859094	33.33 %	66.67 %	0 %	0 %	94993394
39529	NC_008023	ATT	2	6	1859097	1859102	33.33 %	66.67 %	0 %	0 %	94993394
39530	NC_008023	AAC	2	6	1859104	1859109	66.67 %	0 %	0 %	33.33 %	94993394
39531	NC_008023	TTA	2	6	1859128	1859133	33.33 %	66.67 %	0 %	0 %	94993394
39532	NC_008023	TGG	2	6	1859219	1859224	0 %	33.33 %	66.67 %	0 %	94993394
39533	NC_008023	GTA	2	6	1859229	1859234	33.33 %	33.33 %	33.33 %	0 %	94993394
39534	NC_008023	AAGG	2	8	1859244	1859251	50 %	0 %	50 %	0 %	94993394
39535	NC_008023	AGT	2	6	1859337	1859342	33.33 %	33.33 %	33.33 %	0 %	94993394
39536	NC_008023	A	6	6	1859403	1859408	100 %	0 %	0 %	0 %	94993394
39537	NC_008023	ACT	2	6	1859430	1859435	33.33 %	33.33 %	0 %	33.33 %	94993394
39538	NC_008023	ATT	2	6	1859559	1859564	33.33 %	66.67 %	0 %	0 %	94993395
39539	NC_008023	TAT	2	6	1859682	1859687	33.33 %	66.67 %	0 %	0 %	94993395
39540	NC_008023	AGTT	2	8	1859717	1859724	25 %	50 %	25 %	0 %	94993395
39541	NC_008023	ACG	2	6	1859733	1859738	33.33 %	0 %	33.33 %	33.33 %	94993395
39542	NC_008023	A	7	7	1859766	1859772	100 %	0 %	0 %	0 %	94993395
39543	NC_008023	ATC	2	6	1859782	1859787	33.33 %	33.33 %	0 %	33.33 %	94993395
39544	NC_008023	AAG	2	6	1859788	1859793	66.67 %	0 %	33.33 %	0 %	94993395
39545	NC_008023	CAA	2	6	1859815	1859820	66.67 %	0 %	0 %	33.33 %	94993395
39546	NC_008023	GAA	2	6	1859863	1859868	66.67 %	0 %	33.33 %	0 %	94993395
39547	NC_008023	A	8	8	1859894	1859901	100 %	0 %	0 %	0 %	94993395
39548	NC_008023	AT	3	6	1859928	1859933	50 %	50 %	0 %	0 %	94993395
39549	NC_008023	GAA	2	6	1860007	1860012	66.67 %	0 %	33.33 %	0 %	94993395
39550	NC_008023	CG	3	6	1860033	1860038	0 %	0 %	50 %	50 %	94993395
39551	NC_008023	TGA	2	6	1860057	1860062	33.33 %	33.33 %	33.33 %	0 %	94993395
39552	NC_008023	CAA	2	6	1860067	1860072	66.67 %	0 %	0 %	33.33 %	94993395
39553	NC_008023	CTCA	2	8	1860079	1860086	25 %	25 %	0 %	50 %	94993395
39554	NC_008023	A	7	7	1860163	1860169	100 %	0 %	0 %	0 %	94993395
39555	NC_008023	CTT	2	6	1860188	1860193	0 %	66.67 %	0 %	33.33 %	94993395
39556	NC_008023	CT	3	6	1860223	1860228	0 %	50 %	0 %	50 %	94993395
39557	NC_008023	ATG	3	9	1860284	1860292	33.33 %	33.33 %	33.33 %	0 %	94993395
39558	NC_008023	CAA	2	6	1860309	1860314	66.67 %	0 %	0 %	33.33 %	94993395
39559	NC_008023	TTG	2	6	1860326	1860331	0 %	66.67 %	33.33 %	0 %	Non-Coding
39560	NC_008023	T	6	6	1860340	1860345	0 %	100 %	0 %	0 %	Non-Coding
39561	NC_008023	T	6	6	1860347	1860352	0 %	100 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.