MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Rickettsia akari str. Hartford chromosome

Total Repeats: 7672

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
7501	NC_009881	GAA	2	6	1212227	1212232	66.67 %	0 %	33.33 %	0 %	Non-Coding
7502	NC_009881	TCACT	2	10	1212240	1212249	20 %	40 %	0 %	40 %	Non-Coding
7503	NC_009881	TTC	2	6	1212250	1212255	0 %	66.67 %	0 %	33.33 %	Non-Coding
7504	NC_009881	TTG	2	6	1212260	1212265	0 %	66.67 %	33.33 %	0 %	Non-Coding
7505	NC_009881	TTA	2	6	1212293	1212298	33.33 %	66.67 %	0 %	0 %	Non-Coding
7506	NC_009881	A	6	6	1212303	1212308	100 %	0 %	0 %	0 %	Non-Coding
7507	NC_009881	TTTA	2	8	1212329	1212336	25 %	75 %	0 %	0 %	Non-Coding
7508	NC_009881	TAAT	2	8	1212357	1212364	50 %	50 %	0 %	0 %	Non-Coding
7509	NC_009881	CA	3	6	1212648	1212653	50 %	0 %	0 %	50 %	Non-Coding
7510	NC_009881	AGT	2	6	1213793	1213798	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7511	NC_009881	AAT	2	6	1214267	1214272	66.67 %	33.33 %	0 %	0 %	Non-Coding
7512	NC_009881	TAT	2	6	1214284	1214289	33.33 %	66.67 %	0 %	0 %	Non-Coding
7513	NC_009881	CAC	2	6	1214317	1214322	33.33 %	0 %	0 %	66.67 %	Non-Coding
7514	NC_009881	TCA	2	6	1214632	1214637	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7515	NC_009881	TAT	2	6	1214655	1214660	33.33 %	66.67 %	0 %	0 %	Non-Coding
7516	NC_009881	CAA	2	6	1214664	1214669	66.67 %	0 %	0 %	33.33 %	Non-Coding
7517	NC_009881	TAAT	2	8	1214994	1215001	50 %	50 %	0 %	0 %	Non-Coding
7518	NC_009881	TCT	2	6	1215009	1215014	0 %	66.67 %	0 %	33.33 %	Non-Coding
7519	NC_009881	TTA	2	6	1215020	1215025	33.33 %	66.67 %	0 %	0 %	Non-Coding
7520	NC_009881	TA	3	6	1215024	1215029	50 %	50 %	0 %	0 %	Non-Coding
7521	NC_009881	AAC	2	6	1215048	1215053	66.67 %	0 %	0 %	33.33 %	Non-Coding
7522	NC_009881	A	6	6	1215067	1215072	100 %	0 %	0 %	0 %	Non-Coding
7523	NC_009881	TTA	3	9	1215130	1215138	33.33 %	66.67 %	0 %	0 %	Non-Coding
7524	NC_009881	AAT	2	6	1215176	1215181	66.67 %	33.33 %	0 %	0 %	Non-Coding
7525	NC_009881	A	6	6	1215187	1215192	100 %	0 %	0 %	0 %	Non-Coding
7526	NC_009881	TAT	2	6	1215221	1215226	33.33 %	66.67 %	0 %	0 %	Non-Coding
7527	NC_009881	ATT	2	6	1215231	1215236	33.33 %	66.67 %	0 %	0 %	Non-Coding
7528	NC_009881	AAT	2	6	1215251	1215256	66.67 %	33.33 %	0 %	0 %	Non-Coding
7529	NC_009881	AAT	2	6	1215264	1215269	66.67 %	33.33 %	0 %	0 %	Non-Coding
7530	NC_009881	ATT	2	6	1215286	1215291	33.33 %	66.67 %	0 %	0 %	Non-Coding
7531	NC_009881	CTT	2	6	1215292	1215297	0 %	66.67 %	0 %	33.33 %	Non-Coding
7532	NC_009881	ACAA	2	8	1215316	1215323	75 %	0 %	0 %	25 %	Non-Coding
7533	NC_009881	TTC	2	6	1215359	1215364	0 %	66.67 %	0 %	33.33 %	Non-Coding
7534	NC_009881	TTA	2	6	1215368	1215373	33.33 %	66.67 %	0 %	0 %	Non-Coding
7535	NC_009881	GAAAT	2	10	1215383	1215392	60 %	20 %	20 %	0 %	Non-Coding
7536	NC_009881	TAG	2	6	1215399	1215404	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7537	NC_009881	ATAAAA	2	12	1215414	1215425	83.33 %	16.67 %	0 %	0 %	Non-Coding
7538	NC_009881	A	7	7	1215422	1215428	100 %	0 %	0 %	0 %	Non-Coding
7539	NC_009881	TAT	2	6	1215430	1215435	33.33 %	66.67 %	0 %	0 %	Non-Coding
7540	NC_009881	CAAT	2	8	1215682	1215689	50 %	25 %	0 %	25 %	Non-Coding
7541	NC_009881	ATT	2	6	1215698	1215703	33.33 %	66.67 %	0 %	0 %	Non-Coding
7542	NC_009881	ATT	2	6	1215761	1215766	33.33 %	66.67 %	0 %	0 %	Non-Coding
7543	NC_009881	TAT	3	9	1215787	1215795	33.33 %	66.67 %	0 %	0 %	Non-Coding
7544	NC_009881	ATG	2	6	1215804	1215809	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7545	NC_009881	CTT	2	6	1215889	1215894	0 %	66.67 %	0 %	33.33 %	Non-Coding
7546	NC_009881	A	6	6	1215897	1215902	100 %	0 %	0 %	0 %	Non-Coding
7547	NC_009881	ATT	2	6	1215936	1215941	33.33 %	66.67 %	0 %	0 %	Non-Coding
7548	NC_009881	ATA	2	6	1216038	1216043	66.67 %	33.33 %	0 %	0 %	Non-Coding
7549	NC_009881	TGTAA	2	10	1216055	1216064	40 %	40 %	20 %	0 %	Non-Coding
7550	NC_009881	AAG	2	6	1216331	1216336	66.67 %	0 %	33.33 %	0 %	Non-Coding
7551	NC_009881	CGA	2	6	1216406	1216411	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7552	NC_009881	GAA	2	6	1216417	1216422	66.67 %	0 %	33.33 %	0 %	Non-Coding
7553	NC_009881	TTG	2	6	1216424	1216429	0 %	66.67 %	33.33 %	0 %	Non-Coding
7554	NC_009881	TAA	2	6	1216476	1216481	66.67 %	33.33 %	0 %	0 %	Non-Coding
7555	NC_009881	CAA	2	6	1216547	1216552	66.67 %	0 %	0 %	33.33 %	Non-Coding
7556	NC_009881	TAA	2	6	1216556	1216561	66.67 %	33.33 %	0 %	0 %	Non-Coding
7557	NC_009881	ATTGC	2	10	1218532	1218541	20 %	40 %	20 %	20 %	Non-Coding
7558	NC_009881	CTAG	2	8	1218555	1218562	25 %	25 %	25 %	25 %	Non-Coding
7559	NC_009881	A	7	7	1218577	1218583	100 %	0 %	0 %	0 %	Non-Coding
7560	NC_009881	ATG	2	6	1218633	1218638	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7561	NC_009881	CTAG	2	8	1218649	1218656	25 %	25 %	25 %	25 %	Non-Coding
7562	NC_009881	A	7	7	1218686	1218692	100 %	0 %	0 %	0 %	Non-Coding
7563	NC_009881	TGA	2	6	1218723	1218728	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7564	NC_009881	AAAAG	2	10	1218790	1218799	80 %	0 %	20 %	0 %	Non-Coding
7565	NC_009881	TG	3	6	1218801	1218806	0 %	50 %	50 %	0 %	Non-Coding
7566	NC_009881	A	6	6	1218846	1218851	100 %	0 %	0 %	0 %	Non-Coding
7567	NC_009881	CAT	2	6	1218966	1218971	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7568	NC_009881	ATT	2	6	1219526	1219531	33.33 %	66.67 %	0 %	0 %	Non-Coding
7569	NC_009881	TTA	3	9	1219532	1219540	33.33 %	66.67 %	0 %	0 %	Non-Coding
7570	NC_009881	AAT	2	6	1219587	1219592	66.67 %	33.33 %	0 %	0 %	Non-Coding
7571	NC_009881	ATT	2	6	1221669	1221674	33.33 %	66.67 %	0 %	0 %	Non-Coding
7572	NC_009881	TAAA	2	8	1221706	1221713	75 %	25 %	0 %	0 %	Non-Coding
7573	NC_009881	TAC	2	6	1221721	1221726	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7574	NC_009881	AC	3	6	1221893	1221898	50 %	0 %	0 %	50 %	Non-Coding
7575	NC_009881	AGG	2	6	1221902	1221907	33.33 %	0 %	66.67 %	0 %	Non-Coding
7576	NC_009881	CTA	2	6	1221943	1221948	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7577	NC_009881	TTA	2	6	1222003	1222008	33.33 %	66.67 %	0 %	0 %	Non-Coding
7578	NC_009881	A	8	8	1222018	1222025	100 %	0 %	0 %	0 %	Non-Coding
7579	NC_009881	GAA	2	6	1222108	1222113	66.67 %	0 %	33.33 %	0 %	Non-Coding
7580	NC_009881	ATA	2	6	1222135	1222140	66.67 %	33.33 %	0 %	0 %	Non-Coding
7581	NC_009881	AAT	2	6	1222171	1222176	66.67 %	33.33 %	0 %	0 %	Non-Coding
7582	NC_009881	ATT	2	6	1222219	1222224	33.33 %	66.67 %	0 %	0 %	Non-Coding
7583	NC_009881	TAC	2	6	1222315	1222320	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7584	NC_009881	A	7	7	1222343	1222349	100 %	0 %	0 %	0 %	Non-Coding
7585	NC_009881	AGC	2	6	1222421	1222426	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7586	NC_009881	GTTA	2	8	1222756	1222763	25 %	50 %	25 %	0 %	Non-Coding
7587	NC_009881	TAAC	2	8	1222772	1222779	50 %	25 %	0 %	25 %	Non-Coding
7588	NC_009881	AATTT	2	10	1222799	1222808	40 %	60 %	0 %	0 %	Non-Coding
7589	NC_009881	AAAT	2	8	1222824	1222831	75 %	25 %	0 %	0 %	Non-Coding
7590	NC_009881	AGG	2	6	1222845	1222850	33.33 %	0 %	66.67 %	0 %	Non-Coding
7591	NC_009881	AAAAGA	2	12	1222990	1223001	83.33 %	0 %	16.67 %	0 %	Non-Coding
7592	NC_009881	ACA	2	6	1223347	1223352	66.67 %	0 %	0 %	33.33 %	Non-Coding
7593	NC_009881	AGA	2	6	1223353	1223358	66.67 %	0 %	33.33 %	0 %	Non-Coding
7594	NC_009881	A	6	6	1223378	1223383	100 %	0 %	0 %	0 %	Non-Coding
7595	NC_009881	TA	3	6	1223472	1223477	50 %	50 %	0 %	0 %	Non-Coding
7596	NC_009881	ATA	2	6	1223514	1223519	66.67 %	33.33 %	0 %	0 %	Non-Coding
7597	NC_009881	AT	3	6	1223521	1223526	50 %	50 %	0 %	0 %	Non-Coding
7598	NC_009881	A	6	6	1223552	1223557	100 %	0 %	0 %	0 %	Non-Coding
7599	NC_009881	ACT	2	6	1223616	1223621	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7600	NC_009881	A	6	6	1223628	1223633	100 %	0 %	0 %	0 %	Non-Coding
7601	NC_009881	TAC	2	6	1223649	1223654	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7602	NC_009881	TGA	2	6	1223680	1223685	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7603	NC_009881	CAG	2	6	1223766	1223771	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7604	NC_009881	TA	3	6	1223786	1223791	50 %	50 %	0 %	0 %	Non-Coding
7605	NC_009881	A	6	6	1223791	1223796	100 %	0 %	0 %	0 %	Non-Coding
7606	NC_009881	ATG	2	6	1223809	1223814	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7607	NC_009881	A	7	7	1223887	1223893	100 %	0 %	0 %	0 %	Non-Coding
7608	NC_009881	GAA	2	6	1223899	1223904	66.67 %	0 %	33.33 %	0 %	Non-Coding
7609	NC_009881	TGG	2	6	1223928	1223933	0 %	33.33 %	66.67 %	0 %	Non-Coding
7610	NC_009881	TTC	2	6	1223958	1223963	0 %	66.67 %	0 %	33.33 %	Non-Coding
7611	NC_009881	GAA	2	6	1223982	1223987	66.67 %	0 %	33.33 %	0 %	Non-Coding
7612	NC_009881	AGA	2	6	1224013	1224018	66.67 %	0 %	33.33 %	0 %	Non-Coding
7613	NC_009881	AG	3	6	1224023	1224028	50 %	0 %	50 %	0 %	Non-Coding
7614	NC_009881	AGG	2	6	1224091	1224096	33.33 %	0 %	66.67 %	0 %	Non-Coding
7615	NC_009881	TC	3	6	1224111	1224116	0 %	50 %	0 %	50 %	Non-Coding
7616	NC_009881	T	7	7	1224179	1224185	0 %	100 %	0 %	0 %	Non-Coding
7617	NC_009881	TAA	2	6	1224220	1224225	66.67 %	33.33 %	0 %	0 %	Non-Coding
7618	NC_009881	AGA	2	6	1224264	1224269	66.67 %	0 %	33.33 %	0 %	Non-Coding
7619	NC_009881	TTA	2	6	1224307	1224312	33.33 %	66.67 %	0 %	0 %	Non-Coding
7620	NC_009881	A	8	8	1224348	1224355	100 %	0 %	0 %	0 %	Non-Coding
7621	NC_009881	GTTA	2	8	1224371	1224378	25 %	50 %	25 %	0 %	Non-Coding
7622	NC_009881	CTT	2	6	1224388	1224393	0 %	66.67 %	0 %	33.33 %	Non-Coding
7623	NC_009881	AAT	2	6	1224400	1224405	66.67 %	33.33 %	0 %	0 %	Non-Coding
7624	NC_009881	AGT	2	6	1224461	1224466	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7625	NC_009881	ATTG	2	8	1224489	1224496	25 %	50 %	25 %	0 %	Non-Coding
7626	NC_009881	ATG	2	6	1224574	1224579	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7627	NC_009881	TAA	2	6	1224591	1224596	66.67 %	33.33 %	0 %	0 %	Non-Coding
7628	NC_009881	TAGTAA	2	12	1224602	1224613	50 %	33.33 %	16.67 %	0 %	Non-Coding
7629	NC_009881	TA	4	8	1226740	1226747	50 %	50 %	0 %	0 %	Non-Coding
7630	NC_009881	ATT	2	6	1226887	1226892	33.33 %	66.67 %	0 %	0 %	Non-Coding
7631	NC_009881	T	6	6	1226897	1226902	0 %	100 %	0 %	0 %	Non-Coding
7632	NC_009881	ATT	2	6	1226903	1226908	33.33 %	66.67 %	0 %	0 %	Non-Coding
7633	NC_009881	CAA	2	6	1226965	1226970	66.67 %	0 %	0 %	33.33 %	Non-Coding
7634	NC_009881	AGC	2	6	1226980	1226985	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7635	NC_009881	TG	3	6	1226994	1226999	0 %	50 %	50 %	0 %	Non-Coding
7636	NC_009881	AAC	2	6	1227011	1227016	66.67 %	0 %	0 %	33.33 %	Non-Coding
7637	NC_009881	TGT	2	6	1227167	1227172	0 %	66.67 %	33.33 %	0 %	Non-Coding
7638	NC_009881	ATT	2	6	1227173	1227178	33.33 %	66.67 %	0 %	0 %	Non-Coding
7639	NC_009881	TAA	2	6	1227199	1227204	66.67 %	33.33 %	0 %	0 %	Non-Coding
7640	NC_009881	T	6	6	1227256	1227261	0 %	100 %	0 %	0 %	Non-Coding
7641	NC_009881	TGA	2	6	1227310	1227315	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7642	NC_009881	ATA	2	6	1227316	1227321	66.67 %	33.33 %	0 %	0 %	Non-Coding
7643	NC_009881	CT	3	6	1227343	1227348	0 %	50 %	0 %	50 %	Non-Coding
7644	NC_009881	AGT	2	6	1227373	1227378	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7645	NC_009881	ATTT	2	8	1227385	1227392	25 %	75 %	0 %	0 %	Non-Coding
7646	NC_009881	CAT	3	9	1227404	1227412	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7647	NC_009881	TCAA	2	8	1227673	1227680	50 %	25 %	0 %	25 %	Non-Coding
7648	NC_009881	TAT	2	6	1227793	1227798	33.33 %	66.67 %	0 %	0 %	Non-Coding
7649	NC_009881	A	7	7	1227827	1227833	100 %	0 %	0 %	0 %	Non-Coding
7650	NC_009881	CCA	2	6	1227834	1227839	33.33 %	0 %	0 %	66.67 %	Non-Coding
7651	NC_009881	GGT	2	6	1227857	1227862	0 %	33.33 %	66.67 %	0 %	Non-Coding
7652	NC_009881	AG	3	6	1228008	1228013	50 %	0 %	50 %	0 %	Non-Coding
7653	NC_009881	AGA	2	6	1228039	1228044	66.67 %	0 %	33.33 %	0 %	Non-Coding
7654	NC_009881	AT	4	8	1228073	1228080	50 %	50 %	0 %	0 %	Non-Coding
7655	NC_009881	ATT	2	6	1228107	1228112	33.33 %	66.67 %	0 %	0 %	Non-Coding
7656	NC_009881	ACAGA	2	10	1228165	1228174	60 %	0 %	20 %	20 %	Non-Coding
7657	NC_009881	ATA	2	6	1230688	1230693	66.67 %	33.33 %	0 %	0 %	Non-Coding
7658	NC_009881	AT	3	6	1230695	1230700	50 %	50 %	0 %	0 %	Non-Coding
7659	NC_009881	TTA	2	6	1230701	1230706	33.33 %	66.67 %	0 %	0 %	Non-Coding
7660	NC_009881	TTG	2	6	1230707	1230712	0 %	66.67 %	33.33 %	0 %	Non-Coding
7661	NC_009881	TGTA	2	8	1230713	1230720	25 %	50 %	25 %	0 %	Non-Coding
7662	NC_009881	CAA	2	6	1230760	1230765	66.67 %	0 %	0 %	33.33 %	Non-Coding
7663	NC_009881	TTA	2	6	1230771	1230776	33.33 %	66.67 %	0 %	0 %	Non-Coding
7664	NC_009881	ATT	3	9	1230805	1230813	33.33 %	66.67 %	0 %	0 %	Non-Coding
7665	NC_009881	T	6	6	1230887	1230892	0 %	100 %	0 %	0 %	Non-Coding
7666	NC_009881	TATT	2	8	1230933	1230940	25 %	75 %	0 %	0 %	Non-Coding
7667	NC_009881	AAAG	2	8	1230943	1230950	75 %	0 %	25 %	0 %	Non-Coding
7668	NC_009881	TAA	2	6	1230971	1230976	66.67 %	33.33 %	0 %	0 %	Non-Coding
7669	NC_009881	T	6	6	1230990	1230995	0 %	100 %	0 %	0 %	Non-Coding
7670	NC_009881	ATA	2	6	1231016	1231021	66.67 %	33.33 %	0 %	0 %	Non-Coding
7671	NC_009881	TTA	2	6	1231024	1231029	33.33 %	66.67 %	0 %	0 %	Non-Coding
7672	NC_009881	A	6	6	1231029	1231034	100 %	0 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.