MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Psychrobacter sp. PRwf-1 plasmid pRWF101

Total Repeats: 88

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009516	CTG	2	6	41	46	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_009516	TAA	2	6	50	55	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_009516	CTA	2	6	77	82	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_009516	TAA	2	6	103	108	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_009516	TTA	2	6	157	162	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_009516	AGC	2	6	602	607	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_009516	CT	3	6	2020	2025	0 %	50 %	0 %	50 %	Non-Coding
8	NC_009516	TACG	2	8	2094	2101	25 %	25 %	25 %	25 %	Non-Coding
9	NC_009516	TAG	2	6	2176	2181	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_009516	TCA	2	6	2186	2191	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_009516	TTTTTG	2	12	2208	2219	0 %	83.33 %	16.67 %	0 %	Non-Coding
12	NC_009516	ATA	2	6	2246	2251	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_009516	AGTA	2	8	2255	2262	50 %	25 %	25 %	0 %	Non-Coding
14	NC_009516	TA	3	6	2261	2266	50 %	50 %	0 %	0 %	Non-Coding
15	NC_009516	GCC	2	6	2320	2325	0 %	0 %	33.33 %	66.67 %	Non-Coding
16	NC_009516	T	7	7	2350	2356	0 %	100 %	0 %	0 %	Non-Coding
17	NC_009516	GAA	2	6	2436	2441	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_009516	A	8	8	5253	5260	100 %	0 %	0 %	0 %	Non-Coding
19	NC_009516	TAACG	2	10	5321	5330	40 %	20 %	20 %	20 %	Non-Coding
20	NC_009516	AAT	2	6	5342	5347	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_009516	T	6	6	5418	5423	0 %	100 %	0 %	0 %	Non-Coding
22	NC_009516	T	8	8	5433	5440	0 %	100 %	0 %	0 %	Non-Coding
23	NC_009516	TAA	2	6	5479	5484	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_009516	T	6	6	5532	5537	0 %	100 %	0 %	0 %	Non-Coding
25	NC_009516	T	6	6	5572	5577	0 %	100 %	0 %	0 %	Non-Coding
26	NC_009516	GTTT	2	8	5588	5595	0 %	75 %	25 %	0 %	Non-Coding
27	NC_009516	T	6	6	5593	5598	0 %	100 %	0 %	0 %	Non-Coding
28	NC_009516	TTTAG	2	10	5664	5673	20 %	60 %	20 %	0 %	Non-Coding
29	NC_009516	TTA	2	6	5697	5702	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_009516	AAC	2	6	5792	5797	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_009516	CAT	2	6	5829	5834	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_009516	AG	3	6	5842	5847	50 %	0 %	50 %	0 %	Non-Coding
33	NC_009516	AGT	2	6	6511	6516	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_009516	TAT	2	6	6534	6539	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_009516	AT	3	6	7200	7205	50 %	50 %	0 %	0 %	Non-Coding
36	NC_009516	TAT	2	6	7879	7884	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_009516	GGT	2	6	7899	7904	0 %	33.33 %	66.67 %	0 %	Non-Coding
38	NC_009516	GGT	2	6	7932	7937	0 %	33.33 %	66.67 %	0 %	Non-Coding
39	NC_009516	CAA	2	6	8007	8012	66.67 %	0 %	0 %	33.33 %	Non-Coding
40	NC_009516	TTTA	2	8	8015	8022	25 %	75 %	0 %	0 %	Non-Coding
41	NC_009516	A	6	6	8040	8045	100 %	0 %	0 %	0 %	Non-Coding
42	NC_009516	TCA	2	6	8046	8051	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_009516	GAT	2	6	8053	8058	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_009516	TAA	2	6	8129	8134	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_009516	A	7	7	8205	8211	100 %	0 %	0 %	0 %	Non-Coding
46	NC_009516	A	7	7	8245	8251	100 %	0 %	0 %	0 %	Non-Coding
47	NC_009516	TGGTT	2	10	8299	8308	0 %	60 %	40 %	0 %	Non-Coding
48	NC_009516	TA	3	6	8312	8317	50 %	50 %	0 %	0 %	Non-Coding
49	NC_009516	CAA	2	6	8334	8339	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_009516	GA	3	6	8397	8402	50 %	0 %	50 %	0 %	Non-Coding
51	NC_009516	CA	3	6	8424	8429	50 %	0 %	0 %	50 %	Non-Coding
52	NC_009516	TAT	2	6	8488	8493	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_009516	T	7	7	8493	8499	0 %	100 %	0 %	0 %	Non-Coding
54	NC_009516	TTC	2	6	8527	8532	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_009516	TAG	2	6	8537	8542	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_009516	CTT	2	6	8551	8556	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_009516	ATT	2	6	8560	8565	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_009516	TGTA	2	8	8617	8624	25 %	50 %	25 %	0 %	Non-Coding
59	NC_009516	GTTCA	2	10	8639	8648	20 %	40 %	20 %	20 %	Non-Coding
60	NC_009516	A	6	6	8734	8739	100 %	0 %	0 %	0 %	Non-Coding
61	NC_009516	CCT	2	6	9436	9441	0 %	33.33 %	0 %	66.67 %	Non-Coding
62	NC_009516	ACC	2	6	10011	10016	33.33 %	0 %	0 %	66.67 %	Non-Coding
63	NC_009516	CTA	2	6	10048	10053	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_009516	TA	3	6	10057	10062	50 %	50 %	0 %	0 %	Non-Coding
65	NC_009516	ATT	2	6	10520	10525	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_009516	TA	3	6	10530	10535	50 %	50 %	0 %	0 %	Non-Coding
67	NC_009516	A	6	6	10543	10548	100 %	0 %	0 %	0 %	Non-Coding
68	NC_009516	ATT	2	6	10564	10569	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_009516	AGA	2	6	10579	10584	66.67 %	0 %	33.33 %	0 %	Non-Coding
70	NC_009516	ATAA	2	8	10615	10622	75 %	25 %	0 %	0 %	Non-Coding
71	NC_009516	TCAA	2	8	10657	10664	50 %	25 %	0 %	25 %	Non-Coding
72	NC_009516	TAGA	2	8	10667	10674	50 %	25 %	25 %	0 %	Non-Coding
73	NC_009516	ATG	2	6	10718	10723	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_009516	T	6	6	10743	10748	0 %	100 %	0 %	0 %	Non-Coding
75	NC_009516	ATA	2	6	11243	11248	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_009516	AGA	2	6	11251	11256	66.67 %	0 %	33.33 %	0 %	Non-Coding
77	NC_009516	TAA	2	6	11304	11309	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_009516	CGTG	2	8	11316	11323	0 %	25 %	50 %	25 %	Non-Coding
79	NC_009516	ATT	2	6	11324	11329	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_009516	ATA	2	6	11345	11350	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_009516	T	6	6	11420	11425	0 %	100 %	0 %	0 %	Non-Coding
82	NC_009516	AT	3	6	11486	11491	50 %	50 %	0 %	0 %	Non-Coding
83	NC_009516	ATT	2	6	11542	11547	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_009516	T	6	6	11546	11551	0 %	100 %	0 %	0 %	Non-Coding
85	NC_009516	CCT	2	6	13459	13464	0 %	33.33 %	0 %	66.67 %	Non-Coding
86	NC_009516	AAG	2	6	13473	13478	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_009516	CGC	2	6	13490	13495	0 %	0 %	33.33 %	66.67 %	Non-Coding
88	NC_009516	CA	3	6	13942	13947	50 %	0 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.