MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Polaromonas naphthalenivorans CJ2 plasmid pPNAP07

Total Repeats: 65

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008763	AGG	2	6	7	12	33.33 %	0 %	66.67 %	0 %	Non-Coding
2	NC_008763	CAA	2	6	83	88	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_008763	CAA	2	6	103	108	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_008763	AGC	2	6	187	192	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_008763	TGG	2	6	202	207	0 %	33.33 %	66.67 %	0 %	Non-Coding
6	NC_008763	GCT	2	6	237	242	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_008763	AGC	2	6	262	267	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_008763	CGAC	2	8	328	335	25 %	0 %	25 %	50 %	Non-Coding
9	NC_008763	ATG	2	6	423	428	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_008763	TGT	2	6	473	478	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_008763	C	6	6	567	572	0 %	0 %	0 %	100 %	Non-Coding
12	NC_008763	TCA	2	6	692	697	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_008763	ATC	2	6	701	706	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_008763	ATTTT	2	10	758	767	20 %	80 %	0 %	0 %	Non-Coding
15	NC_008763	ATT	2	6	788	793	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_008763	ACG	2	6	851	856	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_008763	GCA	2	6	1383	1388	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_008763	GCT	2	6	1417	1422	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_008763	GAC	2	6	1471	1476	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_008763	CGC	2	6	1527	1532	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_008763	A	6	6	1538	1543	100 %	0 %	0 %	0 %	Non-Coding
22	NC_008763	T	6	6	1573	1578	0 %	100 %	0 %	0 %	Non-Coding
23	NC_008763	ATG	2	6	1585	1590	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_008763	AAAT	3	12	1591	1602	75 %	25 %	0 %	0 %	Non-Coding
25	NC_008763	AT	3	6	2505	2510	50 %	50 %	0 %	0 %	Non-Coding
26	NC_008763	GCT	2	6	2770	2775	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_008763	TGGC	2	8	2798	2805	0 %	25 %	50 %	25 %	Non-Coding
28	NC_008763	GAT	2	6	2872	2877	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_008763	CGG	2	6	2895	2900	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_008763	GAG	3	9	2961	2969	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_008763	GAC	2	6	3000	3005	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_008763	GCA	2	6	3020	3025	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_008763	CGA	2	6	3047	3052	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_008763	ATC	2	6	3124	3129	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
35	NC_008763	T	6	6	3144	3149	0 %	100 %	0 %	0 %	Non-Coding
36	NC_008763	GGTG	2	8	3184	3191	0 %	25 %	75 %	0 %	Non-Coding
37	NC_008763	AATC	2	8	3249	3256	50 %	25 %	0 %	25 %	Non-Coding
38	NC_008763	C	6	6	3665	3670	0 %	0 %	0 %	100 %	Non-Coding
39	NC_008763	GC	3	6	3711	3716	0 %	0 %	50 %	50 %	Non-Coding
40	NC_008763	CTG	2	6	3722	3727	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_008763	ACA	2	6	3769	3774	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_008763	AAC	2	6	3779	3784	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_008763	CCT	2	6	6908	6913	0 %	33.33 %	0 %	66.67 %	Non-Coding
44	NC_008763	GAG	2	6	6958	6963	33.33 %	0 %	66.67 %	0 %	Non-Coding
45	NC_008763	TAAA	2	8	7116	7123	75 %	25 %	0 %	0 %	Non-Coding
46	NC_008763	TTA	2	6	7125	7130	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_008763	A	6	6	7165	7170	100 %	0 %	0 %	0 %	Non-Coding
48	NC_008763	A	6	6	7173	7178	100 %	0 %	0 %	0 %	Non-Coding
49	NC_008763	GAG	2	6	7801	7806	33.33 %	0 %	66.67 %	0 %	Non-Coding
50	NC_008763	GAG	2	6	7834	7839	33.33 %	0 %	66.67 %	0 %	Non-Coding
51	NC_008763	AATTAC	2	12	8012	8023	50 %	33.33 %	0 %	16.67 %	Non-Coding
52	NC_008763	GCT	2	6	8713	8718	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_008763	AAC	2	6	9035	9040	66.67 %	0 %	0 %	33.33 %	Non-Coding
54	NC_008763	TGC	2	6	9233	9238	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_008763	GGCG	2	8	9250	9257	0 %	0 %	75 %	25 %	Non-Coding
56	NC_008763	TCCG	2	8	9327	9334	0 %	25 %	25 %	50 %	Non-Coding
57	NC_008763	CCA	2	6	9400	9405	33.33 %	0 %	0 %	66.67 %	Non-Coding
58	NC_008763	T	7	7	9586	9592	0 %	100 %	0 %	0 %	Non-Coding
59	NC_008763	TGC	2	6	9655	9660	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
60	NC_008763	GCT	2	6	9679	9684	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
61	NC_008763	CATC	2	8	9730	9737	25 %	25 %	0 %	50 %	Non-Coding
62	NC_008763	ATG	2	6	9743	9748	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_008763	CCA	2	6	9770	9775	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_008763	GAG	2	6	9799	9804	33.33 %	0 %	66.67 %	0 %	Non-Coding
65	NC_008763	GC	3	6	9835	9840	0 %	0 %	50 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.