MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Mycobacterium avium subsp. paratuberculosis K-10

Total Repeats: 9626

< Previous12...891011121314151617181920Next >

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
9501	NC_002944	CCA	2	6	4769047	4769052	33.33 %	0 %	0 %	66.67 %	Non-Coding
9502	NC_002944	ATC	2	6	4771726	4771731	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9503	NC_002944	GAT	2	6	4771737	4771742	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9504	NC_002944	CCG	2	6	4771768	4771773	0 %	0 %	33.33 %	66.67 %	Non-Coding
9505	NC_002944	CGG	2	6	4771781	4771786	0 %	0 %	66.67 %	33.33 %	Non-Coding
9506	NC_002944	GCAGAT	2	12	4771787	4771798	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
9507	NC_002944	CGA	2	6	4771805	4771810	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9508	NC_002944	CGG	2	6	4771811	4771816	0 %	0 %	66.67 %	33.33 %	Non-Coding
9509	NC_002944	CGG	2	6	4771826	4771831	0 %	0 %	66.67 %	33.33 %	Non-Coding
9510	NC_002944	GCA	3	9	4771880	4771888	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9511	NC_002944	ACCG	2	8	4773962	4773969	25 %	0 %	25 %	50 %	Non-Coding
9512	NC_002944	GGC	2	6	4773988	4773993	0 %	0 %	66.67 %	33.33 %	Non-Coding
9513	NC_002944	CGC	2	6	4773998	4774003	0 %	0 %	33.33 %	66.67 %	Non-Coding
9514	NC_002944	CGTCT	2	10	4774022	4774031	0 %	40 %	20 %	40 %	Non-Coding
9515	NC_002944	GGC	2	6	4774729	4774734	0 %	0 %	66.67 %	33.33 %	Non-Coding
9516	NC_002944	GCG	2	6	4774735	4774740	0 %	0 %	66.67 %	33.33 %	Non-Coding
9517	NC_002944	GGT	2	6	4774790	4774795	0 %	33.33 %	66.67 %	0 %	Non-Coding
9518	NC_002944	GC	3	6	4774833	4774838	0 %	0 %	50 %	50 %	Non-Coding
9519	NC_002944	TTC	2	6	4774851	4774856	0 %	66.67 %	0 %	33.33 %	Non-Coding
9520	NC_002944	GTG	2	6	4774935	4774940	0 %	33.33 %	66.67 %	0 %	Non-Coding
9521	NC_002944	GTC	2	6	4774949	4774954	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9522	NC_002944	TG	3	6	4774957	4774962	0 %	50 %	50 %	0 %	Non-Coding
9523	NC_002944	CGGCG	2	10	4779091	4779100	0 %	0 %	60 %	40 %	Non-Coding
9524	NC_002944	CG	4	8	4779128	4779135	0 %	0 %	50 %	50 %	Non-Coding
9525	NC_002944	CGC	2	6	4779164	4779169	0 %	0 %	33.33 %	66.67 %	Non-Coding
9526	NC_002944	CCG	3	9	4779196	4779204	0 %	0 %	33.33 %	66.67 %	Non-Coding
9527	NC_002944	CGG	2	6	4779227	4779232	0 %	0 %	66.67 %	33.33 %	Non-Coding
9528	NC_002944	CGG	2	6	4779234	4779239	0 %	0 %	66.67 %	33.33 %	Non-Coding
9529	NC_002944	CGC	2	6	4779293	4779298	0 %	0 %	33.33 %	66.67 %	Non-Coding
9530	NC_002944	CGCAG	2	10	4779342	4779351	20 %	0 %	40 %	40 %	Non-Coding
9531	NC_002944	GCGA	2	8	4779378	4779385	25 %	0 %	50 %	25 %	Non-Coding
9532	NC_002944	TAGC	2	8	4779439	4779446	25 %	25 %	25 %	25 %	Non-Coding
9533	NC_002944	AAC	2	6	4779491	4779496	66.67 %	0 %	0 %	33.33 %	Non-Coding
9534	NC_002944	ACCCC	2	10	4779512	4779521	20 %	0 %	0 %	80 %	Non-Coding
9535	NC_002944	CG	3	6	4779897	4779902	0 %	0 %	50 %	50 %	Non-Coding
9536	NC_002944	GCT	2	6	4782208	4782213	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9537	NC_002944	CGC	2	6	4782255	4782260	0 %	0 %	33.33 %	66.67 %	Non-Coding
9538	NC_002944	TCC	2	6	4782920	4782925	0 %	33.33 %	0 %	66.67 %	Non-Coding
9539	NC_002944	GCA	2	6	4782946	4782951	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9540	NC_002944	GGC	2	6	4784126	4784131	0 %	0 %	66.67 %	33.33 %	Non-Coding
9541	NC_002944	CCCG	2	8	4784132	4784139	0 %	0 %	25 %	75 %	Non-Coding
9542	NC_002944	CCG	2	6	4784154	4784159	0 %	0 %	33.33 %	66.67 %	Non-Coding
9543	NC_002944	CGC	2	6	4784173	4784178	0 %	0 %	33.33 %	66.67 %	Non-Coding
9544	NC_002944	CTAC	2	8	4784192	4784199	25 %	25 %	0 %	50 %	Non-Coding
9545	NC_002944	GCG	2	6	4784220	4784225	0 %	0 %	66.67 %	33.33 %	Non-Coding
9546	NC_002944	CGG	2	6	4784248	4784253	0 %	0 %	66.67 %	33.33 %	Non-Coding
9547	NC_002944	CCG	2	6	4787396	4787401	0 %	0 %	33.33 %	66.67 %	Non-Coding
9548	NC_002944	AGA	2	6	4789741	4789746	66.67 %	0 %	33.33 %	0 %	Non-Coding
9549	NC_002944	GCCG	2	8	4789752	4789759	0 %	0 %	50 %	50 %	Non-Coding
9550	NC_002944	CAT	2	6	4789763	4789768	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9551	NC_002944	AGG	2	6	4789800	4789805	33.33 %	0 %	66.67 %	0 %	Non-Coding
9552	NC_002944	ACG	2	6	4789824	4789829	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9553	NC_002944	CG	3	6	4789828	4789833	0 %	0 %	50 %	50 %	Non-Coding
9554	NC_002944	GC	3	6	4799664	4799669	0 %	0 %	50 %	50 %	Non-Coding
9555	NC_002944	GGC	2	6	4799673	4799678	0 %	0 %	66.67 %	33.33 %	Non-Coding
9556	NC_002944	CCT	2	6	4799719	4799724	0 %	33.33 %	0 %	66.67 %	Non-Coding
9557	NC_002944	CGC	2	6	4799734	4799739	0 %	0 %	33.33 %	66.67 %	Non-Coding
9558	NC_002944	CTG	2	6	4799773	4799778	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9559	NC_002944	CGGC	2	8	4799827	4799834	0 %	0 %	50 %	50 %	Non-Coding
9560	NC_002944	ACCC	2	8	4799866	4799873	25 %	0 %	0 %	75 %	Non-Coding
9561	NC_002944	ACCTC	2	10	4800824	4800833	20 %	20 %	0 %	60 %	Non-Coding
9562	NC_002944	GC	3	6	4800896	4800901	0 %	0 %	50 %	50 %	Non-Coding
9563	NC_002944	CTA	2	6	4803635	4803640	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9564	NC_002944	AGGC	2	8	4803686	4803693	25 %	0 %	50 %	25 %	Non-Coding
9565	NC_002944	GAC	2	6	4803699	4803704	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9566	NC_002944	CCCA	2	8	4803746	4803753	25 %	0 %	0 %	75 %	Non-Coding
9567	NC_002944	GCA	2	6	4803793	4803798	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9568	NC_002944	TCC	2	6	4804447	4804452	0 %	33.33 %	0 %	66.67 %	Non-Coding
9569	NC_002944	GGT	2	6	4804548	4804553	0 %	33.33 %	66.67 %	0 %	Non-Coding
9570	NC_002944	CCGG	2	8	4805164	4805171	0 %	0 %	50 %	50 %	Non-Coding
9571	NC_002944	CAG	2	6	4805173	4805178	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9572	NC_002944	CGC	2	6	4807193	4807198	0 %	0 %	33.33 %	66.67 %	Non-Coding
9573	NC_002944	CAC	2	6	4807206	4807211	33.33 %	0 %	0 %	66.67 %	Non-Coding
9574	NC_002944	CG	3	6	4807740	4807745	0 %	0 %	50 %	50 %	Non-Coding
9575	NC_002944	GAG	2	6	4809236	4809241	33.33 %	0 %	66.67 %	0 %	Non-Coding
9576	NC_002944	CGG	2	6	4809315	4809320	0 %	0 %	66.67 %	33.33 %	Non-Coding
9577	NC_002944	TGC	2	6	4810968	4810973	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9578	NC_002944	GAAC	2	8	4811033	4811040	50 %	0 %	25 %	25 %	Non-Coding
9579	NC_002944	TGG	2	6	4811073	4811078	0 %	33.33 %	66.67 %	0 %	Non-Coding
9580	NC_002944	CAC	2	6	4811115	4811120	33.33 %	0 %	0 %	66.67 %	Non-Coding
9581	NC_002944	GCT	2	6	4811151	4811156	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9582	NC_002944	GGT	2	6	4811158	4811163	0 %	33.33 %	66.67 %	0 %	Non-Coding
9583	NC_002944	CGG	2	6	4811173	4811178	0 %	0 %	66.67 %	33.33 %	Non-Coding
9584	NC_002944	GACA	2	8	4811221	4811228	50 %	0 %	25 %	25 %	Non-Coding
9585	NC_002944	CGAT	2	8	4811251	4811258	25 %	25 %	25 %	25 %	Non-Coding
9586	NC_002944	TCA	2	6	4811310	4811315	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9587	NC_002944	ATC	2	6	4811321	4811326	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9588	NC_002944	TCG	2	6	4811346	4811351	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9589	NC_002944	TTC	2	6	4811358	4811363	0 %	66.67 %	0 %	33.33 %	Non-Coding
9590	NC_002944	ATT	2	6	4811396	4811401	33.33 %	66.67 %	0 %	0 %	Non-Coding
9591	NC_002944	GAT	3	9	4811440	4811448	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9592	NC_002944	GCCCAC	2	12	4811561	4811572	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
9593	NC_002944	GCG	2	6	4811576	4811581	0 %	0 %	66.67 %	33.33 %	Non-Coding
9594	NC_002944	CTA	2	6	4811611	4811616	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9595	NC_002944	CCGCA	2	10	4814792	4814801	20 %	0 %	20 %	60 %	Non-Coding
9596	NC_002944	CCG	2	6	4814805	4814810	0 %	0 %	33.33 %	66.67 %	Non-Coding
9597	NC_002944	GCC	2	6	4814820	4814825	0 %	0 %	33.33 %	66.67 %	Non-Coding
9598	NC_002944	GCG	2	6	4814826	4814831	0 %	0 %	66.67 %	33.33 %	Non-Coding
9599	NC_002944	CGG	2	6	4819073	4819078	0 %	0 %	66.67 %	33.33 %	Non-Coding
9600	NC_002944	CCGT	2	8	4819090	4819097	0 %	25 %	25 %	50 %	Non-Coding
9601	NC_002944	GCCG	2	8	4819847	4819854	0 %	0 %	50 %	50 %	Non-Coding
9602	NC_002944	TGT	2	6	4819855	4819860	0 %	66.67 %	33.33 %	0 %	Non-Coding
9603	NC_002944	TCT	2	6	4821296	4821301	0 %	66.67 %	0 %	33.33 %	Non-Coding
9604	NC_002944	TCG	2	6	4821309	4821314	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9605	NC_002944	CAC	2	6	4821315	4821320	33.33 %	0 %	0 %	66.67 %	Non-Coding
9606	NC_002944	CAGT	2	8	4821400	4821407	25 %	25 %	25 %	25 %	Non-Coding
9607	NC_002944	CCT	2	6	4823419	4823424	0 %	33.33 %	0 %	66.67 %	Non-Coding
9608	NC_002944	GAT	2	6	4823486	4823491	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9609	NC_002944	GCC	2	6	4823510	4823515	0 %	0 %	33.33 %	66.67 %	Non-Coding
9610	NC_002944	CGG	2	6	4823527	4823532	0 %	0 %	66.67 %	33.33 %	Non-Coding
9611	NC_002944	CCG	2	6	4823534	4823539	0 %	0 %	33.33 %	66.67 %	Non-Coding
9612	NC_002944	TTG	2	6	4823575	4823580	0 %	66.67 %	33.33 %	0 %	Non-Coding
9613	NC_002944	CCGG	2	8	4823613	4823620	0 %	0 %	50 %	50 %	Non-Coding
9614	NC_002944	GTC	2	6	4824669	4824674	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9615	NC_002944	GTG	2	6	4824696	4824701	0 %	33.33 %	66.67 %	0 %	Non-Coding
9616	NC_002944	GCC	2	6	4826586	4826591	0 %	0 %	33.33 %	66.67 %	Non-Coding
9617	NC_002944	CGG	2	6	4827234	4827239	0 %	0 %	66.67 %	33.33 %	Non-Coding
9618	NC_002944	GTT	2	6	4829189	4829194	0 %	66.67 %	33.33 %	0 %	Non-Coding
9619	NC_002944	TGC	2	6	4829258	4829263	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9620	NC_002944	GTG	2	6	4829286	4829291	0 %	33.33 %	66.67 %	0 %	Non-Coding
9621	NC_002944	CCGG	2	8	4829389	4829396	0 %	0 %	50 %	50 %	Non-Coding
9622	NC_002944	GCCA	2	8	4829422	4829429	25 %	0 %	25 %	50 %	Non-Coding
9623	NC_002944	AAGC	2	8	4829456	4829463	50 %	0 %	25 %	25 %	Non-Coding
9624	NC_002944	TTC	2	6	4829624	4829629	0 %	66.67 %	0 %	33.33 %	Non-Coding
9625	NC_002944	ATC	2	6	4829678	4829683	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9626	NC_002944	GTT	2	6	4829715	4829720	0 %	66.67 %	33.33 %	0 %	Non-Coding

< Previous12...891011121314151617181920Next >

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.