MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Lactobacillus reuteri SD2112 chromosome

Total Repeats: 7083

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
7001	NC_015697	TTA	2	6	2250334	2250339	33.33 %	66.67 %	0 %	0 %	Non-Coding
7002	NC_015697	GA	3	6	2250353	2250358	50 %	0 %	50 %	0 %	Non-Coding
7003	NC_015697	ACC	2	6	2250396	2250401	33.33 %	0 %	0 %	66.67 %	Non-Coding
7004	NC_015697	TAA	2	6	2251488	2251493	66.67 %	33.33 %	0 %	0 %	Non-Coding
7005	NC_015697	AAG	2	6	2251518	2251523	66.67 %	0 %	33.33 %	0 %	Non-Coding
7006	NC_015697	TAT	2	6	2252574	2252579	33.33 %	66.67 %	0 %	0 %	Non-Coding
7007	NC_015697	A	7	7	2253112	2253118	100 %	0 %	0 %	0 %	Non-Coding
7008	NC_015697	T	6	6	2253144	2253149	0 %	100 %	0 %	0 %	Non-Coding
7009	NC_015697	ATA	2	6	2253167	2253172	66.67 %	33.33 %	0 %	0 %	Non-Coding
7010	NC_015697	CT	3	6	2254003	2254008	0 %	50 %	0 %	50 %	Non-Coding
7011	NC_015697	TAT	2	6	2254412	2254417	33.33 %	66.67 %	0 %	0 %	Non-Coding
7012	NC_015697	AATA	2	8	2254453	2254460	75 %	25 %	0 %	0 %	Non-Coding
7013	NC_015697	TGTATT	2	12	2254470	2254481	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
7014	NC_015697	TAAA	2	8	2254484	2254491	75 %	25 %	0 %	0 %	Non-Coding
7015	NC_015697	T	7	7	2254510	2254516	0 %	100 %	0 %	0 %	Non-Coding
7016	NC_015697	A	6	6	2254634	2254639	100 %	0 %	0 %	0 %	Non-Coding
7017	NC_015697	TAA	2	6	2254891	2254896	66.67 %	33.33 %	0 %	0 %	Non-Coding
7018	NC_015697	TAA	2	6	2254905	2254910	66.67 %	33.33 %	0 %	0 %	Non-Coding
7019	NC_015697	AAT	2	6	2255619	2255624	66.67 %	33.33 %	0 %	0 %	Non-Coding
7020	NC_015697	TTA	2	6	2255640	2255645	33.33 %	66.67 %	0 %	0 %	Non-Coding
7021	NC_015697	TAG	2	6	2255656	2255661	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7022	NC_015697	GTT	2	6	2255796	2255801	0 %	66.67 %	33.33 %	0 %	Non-Coding
7023	NC_015697	TTA	2	6	2256495	2256500	33.33 %	66.67 %	0 %	0 %	Non-Coding
7024	NC_015697	T	6	6	2257732	2257737	0 %	100 %	0 %	0 %	Non-Coding
7025	NC_015697	ACC	2	6	2257742	2257747	33.33 %	0 %	0 %	66.67 %	Non-Coding
7026	NC_015697	CCA	2	6	2257776	2257781	33.33 %	0 %	0 %	66.67 %	Non-Coding
7027	NC_015697	TTA	2	6	2257787	2257792	33.33 %	66.67 %	0 %	0 %	Non-Coding
7028	NC_015697	TAAA	2	8	2257810	2257817	75 %	25 %	0 %	0 %	Non-Coding
7029	NC_015697	G	10	10	2257849	2257858	0 %	0 %	100 %	0 %	Non-Coding
7030	NC_015697	AAAT	2	8	2257912	2257919	75 %	25 %	0 %	0 %	Non-Coding
7031	NC_015697	ATTAA	2	10	2257969	2257978	60 %	40 %	0 %	0 %	Non-Coding
7032	NC_015697	AT	3	6	2257980	2257985	50 %	50 %	0 %	0 %	Non-Coding
7033	NC_015697	ATC	2	6	2257998	2258003	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7034	NC_015697	AGA	2	6	2258667	2258672	66.67 %	0 %	33.33 %	0 %	Non-Coding
7035	NC_015697	T	7	7	2258688	2258694	0 %	100 %	0 %	0 %	Non-Coding
7036	NC_015697	ATC	2	6	2258748	2258753	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7037	NC_015697	GAG	2	6	2258771	2258776	33.33 %	0 %	66.67 %	0 %	Non-Coding
7038	NC_015697	AATCCT	2	12	2258785	2258796	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7039	NC_015697	ATT	2	6	2258800	2258805	33.33 %	66.67 %	0 %	0 %	Non-Coding
7040	NC_015697	AATT	2	8	2258822	2258829	50 %	50 %	0 %	0 %	Non-Coding
7041	NC_015697	TAT	2	6	2258837	2258842	33.33 %	66.67 %	0 %	0 %	Non-Coding
7042	NC_015697	GGT	2	6	2258893	2258898	0 %	33.33 %	66.67 %	0 %	Non-Coding
7043	NC_015697	ATT	2	6	2259058	2259063	33.33 %	66.67 %	0 %	0 %	Non-Coding
7044	NC_015697	T	6	6	2259122	2259127	0 %	100 %	0 %	0 %	Non-Coding
7045	NC_015697	TTTG	2	8	2260144	2260151	0 %	75 %	25 %	0 %	Non-Coding
7046	NC_015697	AGG	2	6	2260223	2260228	33.33 %	0 %	66.67 %	0 %	Non-Coding
7047	NC_015697	CA	3	6	2260260	2260265	50 %	0 %	0 %	50 %	Non-Coding
7048	NC_015697	AAG	2	6	2260269	2260274	66.67 %	0 %	33.33 %	0 %	Non-Coding
7049	NC_015697	ACT	2	6	2260296	2260301	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7050	NC_015697	ATT	2	6	2260314	2260319	33.33 %	66.67 %	0 %	0 %	Non-Coding
7051	NC_015697	ATG	2	6	2260330	2260335	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7052	NC_015697	TTA	2	6	2260353	2260358	33.33 %	66.67 %	0 %	0 %	Non-Coding
7053	NC_015697	CAC	2	6	2260420	2260425	33.33 %	0 %	0 %	66.67 %	Non-Coding
7054	NC_015697	CGG	2	6	2260446	2260451	0 %	0 %	66.67 %	33.33 %	Non-Coding
7055	NC_015697	ACT	2	6	2261907	2261912	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7056	NC_015697	CAT	2	6	2261941	2261946	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7057	NC_015697	GCTT	2	8	2261953	2261960	0 %	50 %	25 %	25 %	Non-Coding
7058	NC_015697	AGT	2	6	2262073	2262078	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7059	NC_015697	AGC	2	6	2262098	2262103	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7060	NC_015697	CTT	2	6	2262134	2262139	0 %	66.67 %	0 %	33.33 %	Non-Coding
7061	NC_015697	TCC	2	6	2262170	2262175	0 %	33.33 %	0 %	66.67 %	Non-Coding
7062	NC_015697	ACT	2	6	2262223	2262228	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7063	NC_015697	CAC	2	6	2262248	2262253	33.33 %	0 %	0 %	66.67 %	Non-Coding
7064	NC_015697	AAG	2	6	2262295	2262300	66.67 %	0 %	33.33 %	0 %	Non-Coding
7065	NC_015697	TGA	2	6	2262304	2262309	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7066	NC_015697	AAAAT	2	10	2262311	2262320	80 %	20 %	0 %	0 %	Non-Coding
7067	NC_015697	T	6	6	2263707	2263712	0 %	100 %	0 %	0 %	Non-Coding
7068	NC_015697	A	6	6	2263782	2263787	100 %	0 %	0 %	0 %	Non-Coding
7069	NC_015697	AAC	2	6	2263911	2263916	66.67 %	0 %	0 %	33.33 %	Non-Coding
7070	NC_015697	GGA	2	6	2263934	2263939	33.33 %	0 %	66.67 %	0 %	Non-Coding
7071	NC_015697	TCC	2	6	2264000	2264005	0 %	33.33 %	0 %	66.67 %	Non-Coding
7072	NC_015697	ATTAA	2	10	2264085	2264094	60 %	40 %	0 %	0 %	Non-Coding
7073	NC_015697	ACA	2	6	2264126	2264131	66.67 %	0 %	0 %	33.33 %	Non-Coding
7074	NC_015697	CGA	2	6	2264178	2264183	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7075	NC_015697	ATATT	2	10	2264184	2264193	40 %	60 %	0 %	0 %	Non-Coding
7076	NC_015697	T	6	6	2264221	2264226	0 %	100 %	0 %	0 %	Non-Coding
7077	NC_015697	A	7	7	2264228	2264234	100 %	0 %	0 %	0 %	Non-Coding
7078	NC_015697	TTTAT	2	10	2264236	2264245	20 %	80 %	0 %	0 %	Non-Coding
7079	NC_015697	A	6	6	2264249	2264254	100 %	0 %	0 %	0 %	Non-Coding
7080	NC_015697	TAAT	2	8	2264256	2264263	50 %	50 %	0 %	0 %	Non-Coding
7081	NC_015697	TGG	2	6	2264296	2264301	0 %	33.33 %	66.67 %	0 %	Non-Coding
7082	NC_015697	TAAA	2	8	2264302	2264309	75 %	25 %	0 %	0 %	Non-Coding
7083	NC_015697	A	6	6	2264307	2264312	100 %	0 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.