MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Leptospira interrogans serovar Lai str. 56601 chromosome I

Total Repeats: 24096

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
24001	NC_004342	TCG	2	6	4327473	4327478	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24002	NC_004342	ATA	2	6	4327515	4327520	66.67 %	33.33 %	0 %	0 %	Non-Coding
24003	NC_004342	GTC	2	6	4327552	4327557	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24004	NC_004342	AT	3	6	4327558	4327563	50 %	50 %	0 %	0 %	Non-Coding
24005	NC_004342	A	6	6	4327564	4327569	100 %	0 %	0 %	0 %	Non-Coding
24006	NC_004342	TTG	2	6	4327578	4327583	0 %	66.67 %	33.33 %	0 %	Non-Coding
24007	NC_004342	AATT	2	8	4327587	4327594	50 %	50 %	0 %	0 %	Non-Coding
24008	NC_004342	CAA	2	6	4327664	4327669	66.67 %	0 %	0 %	33.33 %	Non-Coding
24009	NC_004342	TAG	2	6	4327718	4327723	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24010	NC_004342	ATAAGA	2	12	4327724	4327735	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
24011	NC_004342	A	7	7	4327817	4327823	100 %	0 %	0 %	0 %	Non-Coding
24012	NC_004342	TTA	2	6	4327831	4327836	33.33 %	66.67 %	0 %	0 %	Non-Coding
24013	NC_004342	AAG	2	6	4327852	4327857	66.67 %	0 %	33.33 %	0 %	Non-Coding
24014	NC_004342	GAA	2	6	4327891	4327896	66.67 %	0 %	33.33 %	0 %	Non-Coding
24015	NC_004342	TAC	2	6	4327969	4327974	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24016	NC_004342	TTA	2	6	4327988	4327993	33.33 %	66.67 %	0 %	0 %	Non-Coding
24017	NC_004342	GAA	2	6	4329597	4329602	66.67 %	0 %	33.33 %	0 %	Non-Coding
24018	NC_004342	AG	3	6	4329648	4329653	50 %	0 %	50 %	0 %	Non-Coding
24019	NC_004342	A	6	6	4329828	4329833	100 %	0 %	0 %	0 %	Non-Coding
24020	NC_004342	A	7	7	4329854	4329860	100 %	0 %	0 %	0 %	Non-Coding
24021	NC_004342	AAT	2	6	4329863	4329868	66.67 %	33.33 %	0 %	0 %	Non-Coding
24022	NC_004342	TAG	2	6	4329987	4329992	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24023	NC_004342	CTT	2	6	4330059	4330064	0 %	66.67 %	0 %	33.33 %	Non-Coding
24024	NC_004342	AG	3	6	4330100	4330105	50 %	0 %	50 %	0 %	Non-Coding
24025	NC_004342	CAT	2	6	4330153	4330158	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24026	NC_004342	TCT	2	6	4330213	4330218	0 %	66.67 %	0 %	33.33 %	Non-Coding
24027	NC_004342	ACA	2	6	4330235	4330240	66.67 %	0 %	0 %	33.33 %	Non-Coding
24028	NC_004342	AG	3	6	4330250	4330255	50 %	0 %	50 %	0 %	Non-Coding
24029	NC_004342	AG	3	6	4330315	4330320	50 %	0 %	50 %	0 %	Non-Coding
24030	NC_004342	ATT	2	6	4330337	4330342	33.33 %	66.67 %	0 %	0 %	Non-Coding
24031	NC_004342	GCA	2	6	4330357	4330362	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24032	NC_004342	TAT	2	6	4330418	4330423	33.33 %	66.67 %	0 %	0 %	Non-Coding
24033	NC_004342	TTC	2	6	4330452	4330457	0 %	66.67 %	0 %	33.33 %	Non-Coding
24034	NC_004342	CTT	2	6	4330460	4330465	0 %	66.67 %	0 %	33.33 %	Non-Coding
24035	NC_004342	AAG	2	6	4330513	4330518	66.67 %	0 %	33.33 %	0 %	Non-Coding
24036	NC_004342	CAA	2	6	4330540	4330545	66.67 %	0 %	0 %	33.33 %	Non-Coding
24037	NC_004342	CTA	2	6	4330555	4330560	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24038	NC_004342	TAT	2	6	4330577	4330582	33.33 %	66.67 %	0 %	0 %	Non-Coding
24039	NC_004342	AAT	2	6	4330613	4330618	66.67 %	33.33 %	0 %	0 %	Non-Coding
24040	NC_004342	AGG	2	6	4330653	4330658	33.33 %	0 %	66.67 %	0 %	Non-Coding
24041	NC_004342	ACT	2	6	4330735	4330740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24042	NC_004342	A	6	6	4330798	4330803	100 %	0 %	0 %	0 %	Non-Coding
24043	NC_004342	TTC	2	6	4330829	4330834	0 %	66.67 %	0 %	33.33 %	Non-Coding
24044	NC_004342	TGT	2	6	4330897	4330902	0 %	66.67 %	33.33 %	0 %	Non-Coding
24045	NC_004342	TCA	2	6	4330950	4330955	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24046	NC_004342	TTC	2	6	4330994	4330999	0 %	66.67 %	0 %	33.33 %	Non-Coding
24047	NC_004342	CTT	2	6	4331417	4331422	0 %	66.67 %	0 %	33.33 %	Non-Coding
24048	NC_004342	TATTCA	2	12	4331495	4331506	33.33 %	50 %	0 %	16.67 %	Non-Coding
24049	NC_004342	GTT	2	6	4331609	4331614	0 %	66.67 %	33.33 %	0 %	Non-Coding
24050	NC_004342	A	6	6	4331705	4331710	100 %	0 %	0 %	0 %	Non-Coding
24051	NC_004342	A	6	6	4331753	4331758	100 %	0 %	0 %	0 %	Non-Coding
24052	NC_004342	ATAAA	2	10	4331834	4331843	80 %	20 %	0 %	0 %	Non-Coding
24053	NC_004342	A	6	6	4331870	4331875	100 %	0 %	0 %	0 %	Non-Coding
24054	NC_004342	TAT	2	6	4331892	4331897	33.33 %	66.67 %	0 %	0 %	Non-Coding
24055	NC_004342	AATG	2	8	4332008	4332015	50 %	25 %	25 %	0 %	Non-Coding
24056	NC_004342	A	6	6	4332034	4332039	100 %	0 %	0 %	0 %	Non-Coding
24057	NC_004342	CTT	2	6	4332040	4332045	0 %	66.67 %	0 %	33.33 %	Non-Coding
24058	NC_004342	AATGA	2	10	4332125	4332134	60 %	20 %	20 %	0 %	Non-Coding
24059	NC_004342	T	6	6	4332211	4332216	0 %	100 %	0 %	0 %	Non-Coding
24060	NC_004342	GAT	2	6	4332273	4332278	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24061	NC_004342	CA	3	6	4333128	4333133	50 %	0 %	0 %	50 %	Non-Coding
24062	NC_004342	ACA	3	9	4333131	4333139	66.67 %	0 %	0 %	33.33 %	Non-Coding
24063	NC_004342	T	6	6	4333166	4333171	0 %	100 %	0 %	0 %	Non-Coding
24064	NC_004342	A	6	6	4333223	4333228	100 %	0 %	0 %	0 %	Non-Coding
24065	NC_004342	A	6	6	4333237	4333242	100 %	0 %	0 %	0 %	Non-Coding
24066	NC_004342	ATC	2	6	4333248	4333253	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24067	NC_004342	ATT	2	6	4333268	4333273	33.33 %	66.67 %	0 %	0 %	Non-Coding
24068	NC_004342	TAAA	2	8	4333473	4333480	75 %	25 %	0 %	0 %	Non-Coding
24069	NC_004342	TGT	2	6	4333565	4333570	0 %	66.67 %	33.33 %	0 %	Non-Coding
24070	NC_004342	T	6	6	4333570	4333575	0 %	100 %	0 %	0 %	Non-Coding
24071	NC_004342	AGA	2	6	4333633	4333638	66.67 %	0 %	33.33 %	0 %	Non-Coding
24072	NC_004342	ACT	2	6	4333683	4333688	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24073	NC_004342	A	7	7	4333768	4333774	100 %	0 %	0 %	0 %	Non-Coding
24074	NC_004342	ACT	2	6	4333900	4333905	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24075	NC_004342	ACA	2	6	4333957	4333962	66.67 %	0 %	0 %	33.33 %	Non-Coding
24076	NC_004342	A	7	7	4333976	4333982	100 %	0 %	0 %	0 %	Non-Coding
24077	NC_004342	ATAA	2	8	4334070	4334077	75 %	25 %	0 %	0 %	Non-Coding
24078	NC_004342	ATC	2	6	4334102	4334107	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24079	NC_004342	A	6	6	4334122	4334127	100 %	0 %	0 %	0 %	Non-Coding
24080	NC_004342	ATT	2	6	4334136	4334141	33.33 %	66.67 %	0 %	0 %	Non-Coding
24081	NC_004342	T	6	6	4334183	4334188	0 %	100 %	0 %	0 %	Non-Coding
24082	NC_004342	A	6	6	4334305	4334310	100 %	0 %	0 %	0 %	Non-Coding
24083	NC_004342	T	6	6	4334419	4334424	0 %	100 %	0 %	0 %	Non-Coding
24084	NC_004342	A	6	6	4334457	4334462	100 %	0 %	0 %	0 %	Non-Coding
24085	NC_004342	CAA	2	6	4334482	4334487	66.67 %	0 %	0 %	33.33 %	Non-Coding
24086	NC_004342	GTC	2	6	4334511	4334516	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24087	NC_004342	CAA	2	6	4334610	4334615	66.67 %	0 %	0 %	33.33 %	Non-Coding
24088	NC_004342	ATTA	2	8	4336547	4336554	50 %	50 %	0 %	0 %	Non-Coding
24089	NC_004342	AT	3	6	4338534	4338539	50 %	50 %	0 %	0 %	Non-Coding
24090	NC_004342	AT	3	6	4338552	4338557	50 %	50 %	0 %	0 %	Non-Coding
24091	NC_004342	A	6	6	4338595	4338600	100 %	0 %	0 %	0 %	Non-Coding
24092	NC_004342	AAT	2	6	4338612	4338617	66.67 %	33.33 %	0 %	0 %	Non-Coding
24093	NC_004342	TAAT	2	8	4338625	4338632	50 %	50 %	0 %	0 %	Non-Coding
24094	NC_004342	T	7	7	4338655	4338661	0 %	100 %	0 %	0 %	Non-Coding
24095	NC_004342	CTT	2	6	4338704	4338709	0 %	66.67 %	0 %	33.33 %	Non-Coding
24096	NC_004342	TCAT	2	8	4338727	4338734	25 %	50 %	0 %	25 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.