All Coding Repeats of Helicobacter pylori Rif1 chromosome
Total Repeats: 30648
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
30501 | NC_018937 | TCA | 2 | 6 | 1658620 | 1658625 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024820 |
30502 | NC_018937 | CTGTT | 2 | 10 | 1658631 | 1658640 | 0 % | 60 % | 20 % | 20 % | 410024820 |
30503 | NC_018937 | A | 6 | 6 | 1658656 | 1658661 | 100 % | 0 % | 0 % | 0 % | 410024820 |
30504 | NC_018937 | CTT | 2 | 6 | 1658741 | 1658746 | 0 % | 66.67 % | 0 % | 33.33 % | 410024820 |
30505 | NC_018937 | A | 6 | 6 | 1658755 | 1658760 | 100 % | 0 % | 0 % | 0 % | 410024820 |
30506 | NC_018937 | CAA | 2 | 6 | 1658774 | 1658779 | 66.67 % | 0 % | 0 % | 33.33 % | 410024820 |
30507 | NC_018937 | AAT | 3 | 9 | 1658833 | 1658841 | 66.67 % | 33.33 % | 0 % | 0 % | 410024820 |
30508 | NC_018937 | T | 7 | 7 | 1658841 | 1658847 | 0 % | 100 % | 0 % | 0 % | 410024820 |
30509 | NC_018937 | GTGAA | 2 | 10 | 1658957 | 1658966 | 40 % | 20 % | 40 % | 0 % | 410024821 |
30510 | NC_018937 | GT | 3 | 6 | 1659019 | 1659024 | 0 % | 50 % | 50 % | 0 % | 410024821 |
30511 | NC_018937 | CCA | 2 | 6 | 1659032 | 1659037 | 33.33 % | 0 % | 0 % | 66.67 % | 410024821 |
30512 | NC_018937 | C | 7 | 7 | 1659131 | 1659137 | 0 % | 0 % | 0 % | 100 % | 410024821 |
30513 | NC_018937 | TCT | 2 | 6 | 1659364 | 1659369 | 0 % | 66.67 % | 0 % | 33.33 % | 410024821 |
30514 | NC_018937 | ATTG | 2 | 8 | 1659387 | 1659394 | 25 % | 50 % | 25 % | 0 % | 410024821 |
30515 | NC_018937 | A | 7 | 7 | 1659433 | 1659439 | 100 % | 0 % | 0 % | 0 % | 410024821 |
30516 | NC_018937 | CGCT | 2 | 8 | 1659464 | 1659471 | 0 % | 25 % | 25 % | 50 % | 410024821 |
30517 | NC_018937 | TAAAA | 2 | 10 | 1659587 | 1659596 | 80 % | 20 % | 0 % | 0 % | 410024822 |
30518 | NC_018937 | TGG | 2 | 6 | 1659706 | 1659711 | 0 % | 33.33 % | 66.67 % | 0 % | 410024822 |
30519 | NC_018937 | A | 6 | 6 | 1659788 | 1659793 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30520 | NC_018937 | T | 6 | 6 | 1659802 | 1659807 | 0 % | 100 % | 0 % | 0 % | 410024822 |
30521 | NC_018937 | A | 6 | 6 | 1659852 | 1659857 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30522 | NC_018937 | A | 7 | 7 | 1659876 | 1659882 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30523 | NC_018937 | TA | 3 | 6 | 1659959 | 1659964 | 50 % | 50 % | 0 % | 0 % | 410024822 |
30524 | NC_018937 | ATGA | 2 | 8 | 1659965 | 1659972 | 50 % | 25 % | 25 % | 0 % | 410024822 |
30525 | NC_018937 | CCA | 2 | 6 | 1660048 | 1660053 | 33.33 % | 0 % | 0 % | 66.67 % | 410024822 |
30526 | NC_018937 | A | 6 | 6 | 1660071 | 1660076 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30527 | NC_018937 | CAC | 2 | 6 | 1660118 | 1660123 | 33.33 % | 0 % | 0 % | 66.67 % | 410024822 |
30528 | NC_018937 | TGA | 2 | 6 | 1660133 | 1660138 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024822 |
30529 | NC_018937 | ATG | 2 | 6 | 1660140 | 1660145 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024822 |
30530 | NC_018937 | AAC | 2 | 6 | 1660148 | 1660153 | 66.67 % | 0 % | 0 % | 33.33 % | 410024822 |
30531 | NC_018937 | TCT | 2 | 6 | 1660206 | 1660211 | 0 % | 66.67 % | 0 % | 33.33 % | 410024822 |
30532 | NC_018937 | A | 6 | 6 | 1660212 | 1660217 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30533 | NC_018937 | AAC | 3 | 9 | 1660233 | 1660241 | 66.67 % | 0 % | 0 % | 33.33 % | 410024822 |
30534 | NC_018937 | A | 7 | 7 | 1660245 | 1660251 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30535 | NC_018937 | A | 6 | 6 | 1660253 | 1660258 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30536 | NC_018937 | AGAA | 2 | 8 | 1660307 | 1660314 | 75 % | 0 % | 25 % | 0 % | 410024822 |
30537 | NC_018937 | C | 6 | 6 | 1660325 | 1660330 | 0 % | 0 % | 0 % | 100 % | 410024822 |
30538 | NC_018937 | ATG | 2 | 6 | 1660349 | 1660354 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024822 |
30539 | NC_018937 | TTA | 2 | 6 | 1660368 | 1660373 | 33.33 % | 66.67 % | 0 % | 0 % | 410024822 |
30540 | NC_018937 | T | 6 | 6 | 1660397 | 1660402 | 0 % | 100 % | 0 % | 0 % | 410024822 |
30541 | NC_018937 | AAAT | 2 | 8 | 1660426 | 1660433 | 75 % | 25 % | 0 % | 0 % | 410024822 |
30542 | NC_018937 | A | 6 | 6 | 1660443 | 1660448 | 100 % | 0 % | 0 % | 0 % | 410024822 |
30543 | NC_018937 | TAT | 2 | 6 | 1660491 | 1660496 | 33.33 % | 66.67 % | 0 % | 0 % | 410024822 |
30544 | NC_018937 | AG | 3 | 6 | 1660631 | 1660636 | 50 % | 0 % | 50 % | 0 % | 410024823 |
30545 | NC_018937 | CATT | 2 | 8 | 1660714 | 1660721 | 25 % | 50 % | 0 % | 25 % | 410024823 |
30546 | NC_018937 | AGA | 2 | 6 | 1660726 | 1660731 | 66.67 % | 0 % | 33.33 % | 0 % | 410024823 |
30547 | NC_018937 | GAC | 2 | 6 | 1660734 | 1660739 | 33.33 % | 0 % | 33.33 % | 33.33 % | 410024823 |
30548 | NC_018937 | T | 6 | 6 | 1660828 | 1660833 | 0 % | 100 % | 0 % | 0 % | 410024823 |
30549 | NC_018937 | A | 6 | 6 | 1660843 | 1660848 | 100 % | 0 % | 0 % | 0 % | 410024823 |
30550 | NC_018937 | G | 6 | 6 | 1660903 | 1660908 | 0 % | 0 % | 100 % | 0 % | 410024823 |
30551 | NC_018937 | TCAAG | 2 | 10 | 1661026 | 1661035 | 40 % | 20 % | 20 % | 20 % | 410024823 |
30552 | NC_018937 | AGA | 2 | 6 | 1661152 | 1661157 | 66.67 % | 0 % | 33.33 % | 0 % | 410024823 |
30553 | NC_018937 | AAG | 2 | 6 | 1661182 | 1661187 | 66.67 % | 0 % | 33.33 % | 0 % | 410024823 |
30554 | NC_018937 | T | 6 | 6 | 1661204 | 1661209 | 0 % | 100 % | 0 % | 0 % | 410024823 |
30555 | NC_018937 | AG | 3 | 6 | 1661285 | 1661290 | 50 % | 0 % | 50 % | 0 % | 410024823 |
30556 | NC_018937 | GC | 3 | 6 | 1661467 | 1661472 | 0 % | 0 % | 50 % | 50 % | 410024824 |
30557 | NC_018937 | CAAT | 2 | 8 | 1661519 | 1661526 | 50 % | 25 % | 0 % | 25 % | 410024824 |
30558 | NC_018937 | TTA | 2 | 6 | 1661589 | 1661594 | 33.33 % | 66.67 % | 0 % | 0 % | 410024824 |
30559 | NC_018937 | CAA | 2 | 6 | 1661714 | 1661719 | 66.67 % | 0 % | 0 % | 33.33 % | 410024824 |
30560 | NC_018937 | CAA | 2 | 6 | 1661730 | 1661735 | 66.67 % | 0 % | 0 % | 33.33 % | 410024824 |
30561 | NC_018937 | T | 6 | 6 | 1661765 | 1661770 | 0 % | 100 % | 0 % | 0 % | 410024824 |
30562 | NC_018937 | AAC | 2 | 6 | 1661773 | 1661778 | 66.67 % | 0 % | 0 % | 33.33 % | 410024824 |
30563 | NC_018937 | ATC | 2 | 6 | 1661788 | 1661793 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024824 |
30564 | NC_018937 | ATC | 2 | 6 | 1661796 | 1661801 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024824 |
30565 | NC_018937 | ATG | 2 | 6 | 1661802 | 1661807 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024824 |
30566 | NC_018937 | A | 6 | 6 | 1661917 | 1661922 | 100 % | 0 % | 0 % | 0 % | 410024824 |
30567 | NC_018937 | GT | 3 | 6 | 1661946 | 1661951 | 0 % | 50 % | 50 % | 0 % | 410024824 |
30568 | NC_018937 | GAA | 2 | 6 | 1661991 | 1661996 | 66.67 % | 0 % | 33.33 % | 0 % | 410024824 |
30569 | NC_018937 | ATG | 2 | 6 | 1662133 | 1662138 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024824 |
30570 | NC_018937 | TGA | 2 | 6 | 1662170 | 1662175 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024824 |
30571 | NC_018937 | AAC | 2 | 6 | 1662264 | 1662269 | 66.67 % | 0 % | 0 % | 33.33 % | 410024824 |
30572 | NC_018937 | CAA | 2 | 6 | 1662324 | 1662329 | 66.67 % | 0 % | 0 % | 33.33 % | 410024824 |
30573 | NC_018937 | TC | 3 | 6 | 1662458 | 1662463 | 0 % | 50 % | 0 % | 50 % | 410024825 |
30574 | NC_018937 | TTA | 2 | 6 | 1662541 | 1662546 | 33.33 % | 66.67 % | 0 % | 0 % | 410024825 |
30575 | NC_018937 | TGA | 2 | 6 | 1662644 | 1662649 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024825 |
30576 | NC_018937 | AGA | 2 | 6 | 1662693 | 1662698 | 66.67 % | 0 % | 33.33 % | 0 % | 410024825 |
30577 | NC_018937 | AAAC | 2 | 8 | 1662739 | 1662746 | 75 % | 0 % | 0 % | 25 % | 410024825 |
30578 | NC_018937 | G | 6 | 6 | 1662778 | 1662783 | 0 % | 0 % | 100 % | 0 % | 410024825 |
30579 | NC_018937 | AGG | 2 | 6 | 1662903 | 1662908 | 33.33 % | 0 % | 66.67 % | 0 % | 410024825 |
30580 | NC_018937 | A | 6 | 6 | 1662978 | 1662983 | 100 % | 0 % | 0 % | 0 % | 410024825 |
30581 | NC_018937 | A | 6 | 6 | 1663017 | 1663022 | 100 % | 0 % | 0 % | 0 % | 410024825 |
30582 | NC_018937 | A | 7 | 7 | 1663043 | 1663049 | 100 % | 0 % | 0 % | 0 % | 410024825 |
30583 | NC_018937 | TGAA | 2 | 8 | 1663061 | 1663068 | 50 % | 25 % | 25 % | 0 % | 410024825 |
30584 | NC_018937 | CAAA | 2 | 8 | 1663074 | 1663081 | 75 % | 0 % | 0 % | 25 % | 410024825 |
30585 | NC_018937 | CAG | 2 | 6 | 1663126 | 1663131 | 33.33 % | 0 % | 33.33 % | 33.33 % | 410024825 |
30586 | NC_018937 | G | 6 | 6 | 1663179 | 1663184 | 0 % | 0 % | 100 % | 0 % | 410024825 |
30587 | NC_018937 | GCC | 2 | 6 | 1663285 | 1663290 | 0 % | 0 % | 33.33 % | 66.67 % | 410024825 |
30588 | NC_018937 | A | 7 | 7 | 1663322 | 1663328 | 100 % | 0 % | 0 % | 0 % | 410024825 |
30589 | NC_018937 | AAAG | 2 | 8 | 1663403 | 1663410 | 75 % | 0 % | 25 % | 0 % | 410024825 |
30590 | NC_018937 | CAA | 2 | 6 | 1663614 | 1663619 | 66.67 % | 0 % | 0 % | 33.33 % | 410024826 |
30591 | NC_018937 | ACC | 2 | 6 | 1663662 | 1663667 | 33.33 % | 0 % | 0 % | 66.67 % | 410024826 |
30592 | NC_018937 | A | 6 | 6 | 1663674 | 1663679 | 100 % | 0 % | 0 % | 0 % | 410024826 |
30593 | NC_018937 | CG | 3 | 6 | 1663683 | 1663688 | 0 % | 0 % | 50 % | 50 % | 410024826 |
30594 | NC_018937 | AAT | 2 | 6 | 1663842 | 1663847 | 66.67 % | 33.33 % | 0 % | 0 % | 410024826 |
30595 | NC_018937 | T | 6 | 6 | 1663875 | 1663880 | 0 % | 100 % | 0 % | 0 % | 410024826 |
30596 | NC_018937 | CAC | 2 | 6 | 1663901 | 1663906 | 33.33 % | 0 % | 0 % | 66.67 % | 410024826 |
30597 | NC_018937 | AAG | 2 | 6 | 1663916 | 1663921 | 66.67 % | 0 % | 33.33 % | 0 % | 410024826 |
30598 | NC_018937 | CGAG | 2 | 8 | 1663960 | 1663967 | 25 % | 0 % | 50 % | 25 % | 410024826 |
30599 | NC_018937 | CGG | 2 | 6 | 1664113 | 1664118 | 0 % | 0 % | 66.67 % | 33.33 % | 410024826 |
30600 | NC_018937 | GCG | 2 | 6 | 1664164 | 1664169 | 0 % | 0 % | 66.67 % | 33.33 % | 410024826 |
30601 | NC_018937 | AAGGC | 2 | 10 | 1664213 | 1664222 | 40 % | 0 % | 40 % | 20 % | 410024826 |
30602 | NC_018937 | AGA | 2 | 6 | 1664252 | 1664257 | 66.67 % | 0 % | 33.33 % | 0 % | 410024826 |
30603 | NC_018937 | T | 6 | 6 | 1664491 | 1664496 | 0 % | 100 % | 0 % | 0 % | 410024827 |
30604 | NC_018937 | T | 6 | 6 | 1664505 | 1664510 | 0 % | 100 % | 0 % | 0 % | 410024827 |
30605 | NC_018937 | TTGG | 2 | 8 | 1664532 | 1664539 | 0 % | 50 % | 50 % | 0 % | 410024827 |
30606 | NC_018937 | TGA | 2 | 6 | 1664550 | 1664555 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410024827 |
30607 | NC_018937 | CAAA | 2 | 8 | 1665361 | 1665368 | 75 % | 0 % | 0 % | 25 % | 410024828 |
30608 | NC_018937 | CTCA | 2 | 8 | 1665456 | 1665463 | 25 % | 25 % | 0 % | 50 % | 410024828 |
30609 | NC_018937 | CCA | 2 | 6 | 1665468 | 1665473 | 33.33 % | 0 % | 0 % | 66.67 % | 410024828 |
30610 | NC_018937 | ATGC | 2 | 8 | 1666087 | 1666094 | 25 % | 25 % | 25 % | 25 % | 410024829 |
30611 | NC_018937 | CAA | 2 | 6 | 1666259 | 1666264 | 66.67 % | 0 % | 0 % | 33.33 % | 410024829 |
30612 | NC_018937 | C | 6 | 6 | 1666291 | 1666296 | 0 % | 0 % | 0 % | 100 % | 410024829 |
30613 | NC_018937 | CGC | 2 | 6 | 1666317 | 1666322 | 0 % | 0 % | 33.33 % | 66.67 % | 410024829 |
30614 | NC_018937 | T | 6 | 6 | 1666354 | 1666359 | 0 % | 100 % | 0 % | 0 % | 410024829 |
30615 | NC_018937 | TTTC | 2 | 8 | 1666379 | 1666386 | 0 % | 75 % | 0 % | 25 % | 410024829 |
30616 | NC_018937 | CTT | 2 | 6 | 1666388 | 1666393 | 0 % | 66.67 % | 0 % | 33.33 % | 410024829 |
30617 | NC_018937 | CAT | 2 | 6 | 1666394 | 1666399 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024829 |
30618 | NC_018937 | TTC | 2 | 6 | 1666404 | 1666409 | 0 % | 66.67 % | 0 % | 33.33 % | 410024829 |
30619 | NC_018937 | CTT | 2 | 6 | 1666414 | 1666419 | 0 % | 66.67 % | 0 % | 33.33 % | 410024829 |
30620 | NC_018937 | TTG | 2 | 6 | 1666471 | 1666476 | 0 % | 66.67 % | 33.33 % | 0 % | 410024829 |
30621 | NC_018937 | CA | 3 | 6 | 1666498 | 1666503 | 50 % | 0 % | 0 % | 50 % | 410024829 |
30622 | NC_018937 | TTCT | 2 | 8 | 1666592 | 1666599 | 0 % | 75 % | 0 % | 25 % | 410024829 |
30623 | NC_018937 | ATC | 2 | 6 | 1666614 | 1666619 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024829 |
30624 | NC_018937 | T | 6 | 6 | 1666667 | 1666672 | 0 % | 100 % | 0 % | 0 % | 410024829 |
30625 | NC_018937 | CAAA | 2 | 8 | 1666700 | 1666707 | 75 % | 0 % | 0 % | 25 % | 410024829 |
30626 | NC_018937 | TTA | 2 | 6 | 1666799 | 1666804 | 33.33 % | 66.67 % | 0 % | 0 % | 410024829 |
30627 | NC_018937 | AAAC | 2 | 8 | 1666806 | 1666813 | 75 % | 0 % | 0 % | 25 % | 410024829 |
30628 | NC_018937 | ATGC | 2 | 8 | 1667097 | 1667104 | 25 % | 25 % | 25 % | 25 % | 410024830 |
30629 | NC_018937 | CAA | 2 | 6 | 1667269 | 1667274 | 66.67 % | 0 % | 0 % | 33.33 % | 410024830 |
30630 | NC_018937 | AGC | 2 | 6 | 1667324 | 1667329 | 33.33 % | 0 % | 33.33 % | 33.33 % | 410024830 |
30631 | NC_018937 | GCTT | 2 | 8 | 1667340 | 1667347 | 0 % | 50 % | 25 % | 25 % | 410024830 |
30632 | NC_018937 | TTA | 2 | 6 | 1667355 | 1667360 | 33.33 % | 66.67 % | 0 % | 0 % | 410024830 |
30633 | NC_018937 | CT | 3 | 6 | 1667390 | 1667395 | 0 % | 50 % | 0 % | 50 % | 410024830 |
30634 | NC_018937 | T | 6 | 6 | 1667413 | 1667418 | 0 % | 100 % | 0 % | 0 % | 410024830 |
30635 | NC_018937 | T | 6 | 6 | 1667425 | 1667430 | 0 % | 100 % | 0 % | 0 % | 410024830 |
30636 | NC_018937 | AG | 3 | 6 | 1667441 | 1667446 | 50 % | 0 % | 50 % | 0 % | 410024830 |
30637 | NC_018937 | TCAA | 2 | 8 | 1667457 | 1667464 | 50 % | 25 % | 0 % | 25 % | 410024830 |
30638 | NC_018937 | TGT | 2 | 6 | 1667482 | 1667487 | 0 % | 66.67 % | 33.33 % | 0 % | 410024830 |
30639 | NC_018937 | CGCA | 2 | 8 | 1667506 | 1667513 | 25 % | 0 % | 25 % | 50 % | 410024830 |
30640 | NC_018937 | A | 7 | 7 | 1667552 | 1667558 | 100 % | 0 % | 0 % | 0 % | 410024830 |
30641 | NC_018937 | TTC | 2 | 6 | 1667591 | 1667596 | 0 % | 66.67 % | 0 % | 33.33 % | 410024830 |
30642 | NC_018937 | CTT | 2 | 6 | 1667604 | 1667609 | 0 % | 66.67 % | 0 % | 33.33 % | 410024830 |
30643 | NC_018937 | ATT | 2 | 6 | 1667662 | 1667667 | 33.33 % | 66.67 % | 0 % | 0 % | 410024830 |
30644 | NC_018937 | CATT | 2 | 8 | 1667668 | 1667675 | 25 % | 50 % | 0 % | 25 % | 410024830 |
30645 | NC_018937 | TCA | 2 | 6 | 1667691 | 1667696 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024830 |
30646 | NC_018937 | CAAA | 2 | 8 | 1667710 | 1667717 | 75 % | 0 % | 0 % | 25 % | 410024831 |
30647 | NC_018937 | ATATT | 2 | 10 | 1667781 | 1667790 | 40 % | 60 % | 0 % | 0 % | 410024831 |
30648 | NC_018937 | CTA | 2 | 6 | 1667809 | 1667814 | 33.33 % | 33.33 % | 0 % | 33.33 % | 410024831 |