MICAS: Microsatellite Analysis Server 3.0

All Repeats of Herbaspirillum seropedicae SmR1 chromosome

Total Repeats: 139543

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
139501	NC_014323	CG	4	8	5512459	5512466	0 %	0 %	50 %	50 %	300314080
139502	NC_014323	CCG	2	6	5512473	5512478	0 %	0 %	33.33 %	66.67 %	Non-Coding
139503	NC_014323	GCCA	2	8	5512490	5512497	25 %	0 %	25 %	50 %	Non-Coding
139504	NC_014323	GTA	2	6	5512539	5512544	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
139505	NC_014323	TCC	3	9	5512556	5512564	0 %	33.33 %	0 %	66.67 %	Non-Coding
139506	NC_014323	AGGA	2	8	5512571	5512578	50 %	0 %	50 %	0 %	Non-Coding
139507	NC_014323	T	7	7	5512608	5512614	0 %	100 %	0 %	0 %	Non-Coding
139508	NC_014323	GCA	2	6	5512638	5512643	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
139509	NC_014323	ACC	2	6	5512672	5512677	33.33 %	0 %	0 %	66.67 %	Non-Coding
139510	NC_014323	CGC	2	6	5512682	5512687	0 %	0 %	33.33 %	66.67 %	Non-Coding
139511	NC_014323	AGA	3	9	5512691	5512699	66.67 %	0 %	33.33 %	0 %	Non-Coding
139512	NC_014323	CTC	2	6	5512721	5512726	0 %	33.33 %	0 %	66.67 %	300314081
139513	NC_014323	GGC	2	6	5512787	5512792	0 %	0 %	66.67 %	33.33 %	300314081
139514	NC_014323	CTT	2	6	5512828	5512833	0 %	66.67 %	0 %	33.33 %	300314081
139515	NC_014323	GGC	2	6	5512870	5512875	0 %	0 %	66.67 %	33.33 %	300314081
139516	NC_014323	GCA	2	6	5512924	5512929	33.33 %	0 %	33.33 %	33.33 %	300314081
139517	NC_014323	CAC	2	6	5513089	5513094	33.33 %	0 %	0 %	66.67 %	300314081
139518	NC_014323	TCC	2	6	5513121	5513126	0 %	33.33 %	0 %	66.67 %	300314081
139519	NC_014323	CCCTGC	2	12	5513154	5513165	0 %	16.67 %	16.67 %	66.67 %	300314081
139520	NC_014323	GC	3	6	5513176	5513181	0 %	0 %	50 %	50 %	300314081
139521	NC_014323	TCG	2	6	5513196	5513201	0 %	33.33 %	33.33 %	33.33 %	300314081
139522	NC_014323	TGC	2	6	5513232	5513237	0 %	33.33 %	33.33 %	33.33 %	300314081
139523	NC_014323	CCAC	2	8	5513271	5513278	25 %	0 %	0 %	75 %	300314081
139524	NC_014323	CTA	2	6	5513281	5513286	33.33 %	33.33 %	0 %	33.33 %	300314081
139525	NC_014323	GAC	2	6	5513330	5513335	33.33 %	0 %	33.33 %	33.33 %	300314081
139526	NC_014323	CAC	2	6	5513359	5513364	33.33 %	0 %	0 %	66.67 %	300314081
139527	NC_014323	GTG	2	6	5513468	5513473	0 %	33.33 %	66.67 %	0 %	300314081
139528	NC_014323	TTGTC	2	10	5513499	5513508	0 %	60 %	20 %	20 %	Non-Coding
139529	NC_014323	ACA	2	6	5513546	5513551	66.67 %	0 %	0 %	33.33 %	Non-Coding
139530	NC_014323	A	6	6	5513551	5513556	100 %	0 %	0 %	0 %	Non-Coding
139531	NC_014323	GC	3	6	5513557	5513562	0 %	0 %	50 %	50 %	Non-Coding
139532	NC_014323	CT	3	6	5513571	5513576	0 %	50 %	0 %	50 %	Non-Coding
139533	NC_014323	TCCC	2	8	5513577	5513584	0 %	25 %	0 %	75 %	Non-Coding
139534	NC_014323	A	6	6	5513601	5513606	100 %	0 %	0 %	0 %	Non-Coding
139535	NC_014323	GCT	2	6	5513642	5513647	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
139536	NC_014323	GC	3	6	5513687	5513692	0 %	0 %	50 %	50 %	Non-Coding
139537	NC_014323	GCT	2	6	5513706	5513711	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
139538	NC_014323	T	7	7	5513733	5513739	0 %	100 %	0 %	0 %	Non-Coding
139539	NC_014323	T	6	6	5513745	5513750	0 %	100 %	0 %	0 %	Non-Coding
139540	NC_014323	GAC	2	6	5513814	5513819	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
139541	NC_014323	CCA	2	6	5513825	5513830	33.33 %	0 %	0 %	66.67 %	Non-Coding
139542	NC_014323	GTCC	2	8	5513833	5513840	0 %	25 %	25 %	50 %	Non-Coding
139543	NC_014323	CGG	2	6	5513853	5513858	0 %	0 %	66.67 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.