MICAS: Microsatellite Analysis Server 3.0

All Repeats of Haemophilus influenzae PittGG chromosome

Total Repeats: 40117

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
40001	NC_009567	TAT	2	6	1882036	1882041	33.33 %	66.67 %	0 %	0 %	Non-Coding
40002	NC_009567	GCA	2	6	1882055	1882060	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40003	NC_009567	ATT	2	6	1882084	1882089	33.33 %	66.67 %	0 %	0 %	Non-Coding
40004	NC_009567	ACA	2	6	1882157	1882162	66.67 %	0 %	0 %	33.33 %	Non-Coding
40005	NC_009567	TAC	2	6	1882207	1882212	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40006	NC_009567	TGC	2	6	1882225	1882230	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40007	NC_009567	GCA	2	6	1882301	1882306	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40008	NC_009567	ATTG	2	8	1882318	1882325	25 %	50 %	25 %	0 %	Non-Coding
40009	NC_009567	A	6	6	1882343	1882348	100 %	0 %	0 %	0 %	Non-Coding
40010	NC_009567	ATA	2	6	1882387	1882392	66.67 %	33.33 %	0 %	0 %	Non-Coding
40011	NC_009567	T	7	7	1882429	1882435	0 %	100 %	0 %	0 %	148828424
40012	NC_009567	A	6	6	1882460	1882465	100 %	0 %	0 %	0 %	148828424
40013	NC_009567	T	6	6	1882488	1882493	0 %	100 %	0 %	0 %	148828424
40014	NC_009567	T	7	7	1882497	1882503	0 %	100 %	0 %	0 %	148828424
40015	NC_009567	T	7	7	1882510	1882516	0 %	100 %	0 %	0 %	148828424
40016	NC_009567	GTT	2	6	1882517	1882522	0 %	66.67 %	33.33 %	0 %	148828424
40017	NC_009567	T	8	8	1882539	1882546	0 %	100 %	0 %	0 %	148828424
40018	NC_009567	TAT	2	6	1882553	1882558	33.33 %	66.67 %	0 %	0 %	148828424
40019	NC_009567	GAA	2	6	1882622	1882627	66.67 %	0 %	33.33 %	0 %	Non-Coding
40020	NC_009567	TGG	2	6	1882645	1882650	0 %	33.33 %	66.67 %	0 %	Non-Coding
40021	NC_009567	TGA	2	6	1882664	1882669	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40022	NC_009567	GTAT	2	8	1882679	1882686	25 %	50 %	25 %	0 %	Non-Coding
40023	NC_009567	ATG	2	6	1882720	1882725	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40024	NC_009567	GGT	2	6	1882740	1882745	0 %	33.33 %	66.67 %	0 %	Non-Coding
40025	NC_009567	TG	3	6	1882827	1882832	0 %	50 %	50 %	0 %	Non-Coding
40026	NC_009567	CAA	2	6	1882855	1882860	66.67 %	0 %	0 %	33.33 %	Non-Coding
40027	NC_009567	A	6	6	1883046	1883051	100 %	0 %	0 %	0 %	Non-Coding
40028	NC_009567	GTC	2	6	1883074	1883079	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40029	NC_009567	TGT	3	9	1883087	1883095	0 %	66.67 %	33.33 %	0 %	Non-Coding
40030	NC_009567	A	7	7	1883208	1883214	100 %	0 %	0 %	0 %	Non-Coding
40031	NC_009567	GAA	2	6	1883238	1883243	66.67 %	0 %	33.33 %	0 %	Non-Coding
40032	NC_009567	GGT	3	9	1883260	1883268	0 %	33.33 %	66.67 %	0 %	Non-Coding
40033	NC_009567	CTG	2	6	1883276	1883281	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40034	NC_009567	CGTT	2	8	1883460	1883467	0 %	50 %	25 %	25 %	Non-Coding
40035	NC_009567	TGA	2	6	1883469	1883474	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40036	NC_009567	AAT	2	6	1883485	1883490	66.67 %	33.33 %	0 %	0 %	Non-Coding
40037	NC_009567	ATATTG	2	12	1883525	1883536	33.33 %	50 %	16.67 %	0 %	Non-Coding
40038	NC_009567	GAA	2	6	1883605	1883610	66.67 %	0 %	33.33 %	0 %	Non-Coding
40039	NC_009567	TGAA	2	8	1883624	1883631	50 %	25 %	25 %	0 %	Non-Coding
40040	NC_009567	TGG	2	6	1883665	1883670	0 %	33.33 %	66.67 %	0 %	Non-Coding
40041	NC_009567	A	7	7	1883694	1883700	100 %	0 %	0 %	0 %	Non-Coding
40042	NC_009567	CAA	2	6	1883740	1883745	66.67 %	0 %	0 %	33.33 %	Non-Coding
40043	NC_009567	TGC	2	6	1883820	1883825	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40044	NC_009567	TGG	2	6	1883868	1883873	0 %	33.33 %	66.67 %	0 %	Non-Coding
40045	NC_009567	GGTTTT	2	12	1883887	1883898	0 %	66.67 %	33.33 %	0 %	Non-Coding
40046	NC_009567	TGT	2	6	1883940	1883945	0 %	66.67 %	33.33 %	0 %	Non-Coding
40047	NC_009567	GTA	2	6	1883963	1883968	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40048	NC_009567	TGT	2	6	1884018	1884023	0 %	66.67 %	33.33 %	0 %	Non-Coding
40049	NC_009567	ATT	2	6	1884025	1884030	33.33 %	66.67 %	0 %	0 %	Non-Coding
40050	NC_009567	AAT	2	6	1884037	1884042	66.67 %	33.33 %	0 %	0 %	Non-Coding
40051	NC_009567	GATTT	2	10	1884073	1884082	20 %	60 %	20 %	0 %	Non-Coding
40052	NC_009567	AAG	2	6	1884203	1884208	66.67 %	0 %	33.33 %	0 %	Non-Coding
40053	NC_009567	AAAT	2	8	1884222	1884229	75 %	25 %	0 %	0 %	Non-Coding
40054	NC_009567	GTG	3	9	1884287	1884295	0 %	33.33 %	66.67 %	0 %	Non-Coding
40055	NC_009567	AATG	2	8	1884297	1884304	50 %	25 %	25 %	0 %	Non-Coding
40056	NC_009567	GTT	2	6	1884397	1884402	0 %	66.67 %	33.33 %	0 %	Non-Coding
40057	NC_009567	GAT	2	6	1884457	1884462	33.33 %	33.33 %	33.33 %	0 %	148828425
40058	NC_009567	AAC	2	6	1884527	1884532	66.67 %	0 %	0 %	33.33 %	148828425
40059	NC_009567	CAATT	2	10	1884704	1884713	40 %	40 %	0 %	20 %	148828425
40060	NC_009567	AGA	2	6	1884759	1884764	66.67 %	0 %	33.33 %	0 %	148828425
40061	NC_009567	GTTC	2	8	1884784	1884791	0 %	50 %	25 %	25 %	148828425
40062	NC_009567	GATT	2	8	1884794	1884801	25 %	50 %	25 %	0 %	148828425
40063	NC_009567	GT	3	6	1884803	1884808	0 %	50 %	50 %	0 %	148828425
40064	NC_009567	TAT	2	6	1884884	1884889	33.33 %	66.67 %	0 %	0 %	Non-Coding
40065	NC_009567	T	7	7	1884901	1884907	0 %	100 %	0 %	0 %	Non-Coding
40066	NC_009567	A	7	7	1884910	1884916	100 %	0 %	0 %	0 %	Non-Coding
40067	NC_009567	AGT	2	6	1885035	1885040	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40068	NC_009567	T	7	7	1885056	1885062	0 %	100 %	0 %	0 %	Non-Coding
40069	NC_009567	A	6	6	1885080	1885085	100 %	0 %	0 %	0 %	Non-Coding
40070	NC_009567	T	6	6	1885126	1885131	0 %	100 %	0 %	0 %	148828426
40071	NC_009567	T	6	6	1885174	1885179	0 %	100 %	0 %	0 %	148828426
40072	NC_009567	TAA	2	6	1885184	1885189	66.67 %	33.33 %	0 %	0 %	148828426
40073	NC_009567	ATAA	2	8	1885285	1885292	75 %	25 %	0 %	0 %	148828426
40074	NC_009567	GCG	2	6	1885306	1885311	0 %	0 %	66.67 %	33.33 %	148828426
40075	NC_009567	CTT	2	6	1885315	1885320	0 %	66.67 %	0 %	33.33 %	148828426
40076	NC_009567	CTT	2	6	1885339	1885344	0 %	66.67 %	0 %	33.33 %	148828426
40077	NC_009567	TTCT	2	8	1885372	1885379	0 %	75 %	0 %	25 %	148828426
40078	NC_009567	ATC	2	6	1885382	1885387	33.33 %	33.33 %	0 %	33.33 %	148828426
40079	NC_009567	TTA	2	6	1885437	1885442	33.33 %	66.67 %	0 %	0 %	148828426
40080	NC_009567	CGAA	2	8	1885448	1885455	50 %	0 %	25 %	25 %	148828426
40081	NC_009567	AGT	2	6	1885535	1885540	33.33 %	33.33 %	33.33 %	0 %	148828426
40082	NC_009567	GA	3	6	1885551	1885556	50 %	0 %	50 %	0 %	148828426
40083	NC_009567	CTT	2	6	1885600	1885605	0 %	66.67 %	0 %	33.33 %	148828426
40084	NC_009567	TCA	2	6	1885608	1885613	33.33 %	33.33 %	0 %	33.33 %	148828426
40085	NC_009567	T	7	7	1885629	1885635	0 %	100 %	0 %	0 %	148828426
40086	NC_009567	ATTA	2	8	1885637	1885644	50 %	50 %	0 %	0 %	148828426
40087	NC_009567	GCC	2	6	1885697	1885702	0 %	0 %	33.33 %	66.67 %	148828426
40088	NC_009567	CAT	2	6	1885739	1885744	33.33 %	33.33 %	0 %	33.33 %	148828426
40089	NC_009567	TTG	2	6	1885814	1885819	0 %	66.67 %	33.33 %	0 %	148828426
40090	NC_009567	A	6	6	1885846	1885851	100 %	0 %	0 %	0 %	148828426
40091	NC_009567	TGC	2	6	1885892	1885897	0 %	33.33 %	33.33 %	33.33 %	148828426
40092	NC_009567	CCG	2	6	1885926	1885931	0 %	0 %	33.33 %	66.67 %	148828426
40093	NC_009567	T	6	6	1885934	1885939	0 %	100 %	0 %	0 %	148828426
40094	NC_009567	TAAA	2	8	1885988	1885995	75 %	25 %	0 %	0 %	148828426
40095	NC_009567	CAT	2	6	1886008	1886013	33.33 %	33.33 %	0 %	33.33 %	148828426
40096	NC_009567	T	6	6	1886033	1886038	0 %	100 %	0 %	0 %	148828426
40097	NC_009567	TCT	2	6	1886043	1886048	0 %	66.67 %	0 %	33.33 %	148828426
40098	NC_009567	TTG	2	6	1886141	1886146	0 %	66.67 %	33.33 %	0 %	148828426
40099	NC_009567	ACG	2	6	1886211	1886216	33.33 %	0 %	33.33 %	33.33 %	148828426
40100	NC_009567	TTCATC	2	12	1886243	1886254	16.67 %	50 %	0 %	33.33 %	148828426
40101	NC_009567	T	6	6	1886261	1886266	0 %	100 %	0 %	0 %	148828426
40102	NC_009567	T	6	6	1886329	1886334	0 %	100 %	0 %	0 %	148828426
40103	NC_009567	AAT	2	6	1886497	1886502	66.67 %	33.33 %	0 %	0 %	148828426
40104	NC_009567	TGTT	2	8	1886513	1886520	0 %	75 %	25 %	0 %	148828426
40105	NC_009567	GTT	2	6	1886574	1886579	0 %	66.67 %	33.33 %	0 %	148828426
40106	NC_009567	T	7	7	1886705	1886711	0 %	100 %	0 %	0 %	148828426
40107	NC_009567	ATA	2	6	1886721	1886726	66.67 %	33.33 %	0 %	0 %	148828426
40108	NC_009567	ATC	2	6	1886808	1886813	33.33 %	33.33 %	0 %	33.33 %	148828426
40109	NC_009567	ATAGA	2	10	1886833	1886842	60 %	20 %	20 %	0 %	148828426
40110	NC_009567	T	6	6	1886856	1886861	0 %	100 %	0 %	0 %	148828426
40111	NC_009567	AAT	2	6	1886877	1886882	66.67 %	33.33 %	0 %	0 %	Non-Coding
40112	NC_009567	AAT	2	6	1886886	1886891	66.67 %	33.33 %	0 %	0 %	Non-Coding
40113	NC_009567	CAG	2	6	1886968	1886973	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40114	NC_009567	GAAA	2	8	1886988	1886995	75 %	0 %	25 %	0 %	Non-Coding
40115	NC_009567	ATC	2	6	1887049	1887054	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40116	NC_009567	TTA	2	6	1887105	1887110	33.33 %	66.67 %	0 %	0 %	Non-Coding
40117	NC_009567	ATA	2	6	1887133	1887138	66.67 %	33.33 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.