MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Dinoroseobacter shibae DFL 12 chromosome

Total Repeats: 7641

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
7501	NC_009952	TC	4	8	3676433	3676440	0 %	50 %	0 %	50 %	Non-Coding
7502	NC_009952	T	6	6	3677506	3677511	0 %	100 %	0 %	0 %	Non-Coding
7503	NC_009952	CGT	2	6	3677513	3677518	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7504	NC_009952	CGC	2	6	3677563	3677568	0 %	0 %	33.33 %	66.67 %	Non-Coding
7505	NC_009952	CAA	2	6	3677628	3677633	66.67 %	0 %	0 %	33.33 %	Non-Coding
7506	NC_009952	GAG	2	6	3677644	3677649	33.33 %	0 %	66.67 %	0 %	Non-Coding
7507	NC_009952	GGA	2	6	3678266	3678271	33.33 %	0 %	66.67 %	0 %	Non-Coding
7508	NC_009952	CGTT	2	8	3678311	3678318	0 %	50 %	25 %	25 %	Non-Coding
7509	NC_009952	GCC	2	6	3678329	3678334	0 %	0 %	33.33 %	66.67 %	Non-Coding
7510	NC_009952	GCC	3	9	3678342	3678350	0 %	0 %	33.33 %	66.67 %	Non-Coding
7511	NC_009952	GC	3	6	3678414	3678419	0 %	0 %	50 %	50 %	Non-Coding
7512	NC_009952	GAC	2	6	3678484	3678489	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7513	NC_009952	A	7	7	3678551	3678557	100 %	0 %	0 %	0 %	Non-Coding
7514	NC_009952	TCT	2	6	3678592	3678597	0 %	66.67 %	0 %	33.33 %	Non-Coding
7515	NC_009952	GCC	2	6	3678660	3678665	0 %	0 %	33.33 %	66.67 %	Non-Coding
7516	NC_009952	GCA	3	9	3678675	3678683	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7517	NC_009952	ACC	2	6	3678684	3678689	33.33 %	0 %	0 %	66.67 %	Non-Coding
7518	NC_009952	ATG	2	6	3678717	3678722	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7519	NC_009952	TCG	2	6	3678736	3678741	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7520	NC_009952	GGTTG	2	10	3678765	3678774	0 %	40 %	60 %	0 %	Non-Coding
7521	NC_009952	CTG	2	6	3678783	3678788	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7522	NC_009952	GGC	2	6	3678800	3678805	0 %	0 %	66.67 %	33.33 %	Non-Coding
7523	NC_009952	GGC	2	6	3678849	3678854	0 %	0 %	66.67 %	33.33 %	Non-Coding
7524	NC_009952	GCC	2	6	3678861	3678866	0 %	0 %	33.33 %	66.67 %	Non-Coding
7525	NC_009952	ATC	2	6	3678879	3678884	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7526	NC_009952	ACC	2	6	3678893	3678898	33.33 %	0 %	0 %	66.67 %	Non-Coding
7527	NC_009952	GCCGC	2	10	3678904	3678913	0 %	0 %	40 %	60 %	Non-Coding
7528	NC_009952	TA	3	6	3687689	3687694	50 %	50 %	0 %	0 %	Non-Coding
7529	NC_009952	TGT	2	6	3687740	3687745	0 %	66.67 %	33.33 %	0 %	Non-Coding
7530	NC_009952	TTG	2	6	3693556	3693561	0 %	66.67 %	33.33 %	0 %	Non-Coding
7531	NC_009952	AC	3	6	3693617	3693622	50 %	0 %	0 %	50 %	Non-Coding
7532	NC_009952	AAC	2	6	3695718	3695723	66.67 %	0 %	0 %	33.33 %	Non-Coding
7533	NC_009952	GC	3	6	3697720	3697725	0 %	0 %	50 %	50 %	Non-Coding
7534	NC_009952	CAC	2	6	3697729	3697734	33.33 %	0 %	0 %	66.67 %	Non-Coding
7535	NC_009952	AAG	2	6	3699449	3699454	66.67 %	0 %	33.33 %	0 %	Non-Coding
7536	NC_009952	GC	3	6	3699485	3699490	0 %	0 %	50 %	50 %	Non-Coding
7537	NC_009952	GAT	2	6	3701055	3701060	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7538	NC_009952	GGA	2	6	3701398	3701403	33.33 %	0 %	66.67 %	0 %	Non-Coding
7539	NC_009952	GGACC	2	10	3701756	3701765	20 %	0 %	40 %	40 %	Non-Coding
7540	NC_009952	CTG	2	6	3701779	3701784	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7541	NC_009952	CCG	2	6	3701858	3701863	0 %	0 %	33.33 %	66.67 %	Non-Coding
7542	NC_009952	TGC	2	6	3704833	3704838	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7543	NC_009952	GCC	2	6	3704868	3704873	0 %	0 %	33.33 %	66.67 %	Non-Coding
7544	NC_009952	CGC	2	6	3704894	3704899	0 %	0 %	33.33 %	66.67 %	Non-Coding
7545	NC_009952	CTCAAG	2	12	3706923	3706934	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
7546	NC_009952	GT	3	6	3706972	3706977	0 %	50 %	50 %	0 %	Non-Coding
7547	NC_009952	G	6	6	3707009	3707014	0 %	0 %	100 %	0 %	Non-Coding
7548	NC_009952	GCA	2	6	3710985	3710990	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7549	NC_009952	GGC	2	6	3713454	3713459	0 %	0 %	66.67 %	33.33 %	Non-Coding
7550	NC_009952	GC	3	6	3713485	3713490	0 %	0 %	50 %	50 %	Non-Coding
7551	NC_009952	TTA	2	6	3713504	3713509	33.33 %	66.67 %	0 %	0 %	Non-Coding
7552	NC_009952	TCT	2	6	3713541	3713546	0 %	66.67 %	0 %	33.33 %	Non-Coding
7553	NC_009952	GAT	2	6	3720593	3720598	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7554	NC_009952	GCCT	2	8	3727896	3727903	0 %	25 %	25 %	50 %	Non-Coding
7555	NC_009952	TC	3	6	3727930	3727935	0 %	50 %	0 %	50 %	Non-Coding
7556	NC_009952	GCG	2	6	3727957	3727962	0 %	0 %	66.67 %	33.33 %	Non-Coding
7557	NC_009952	C	6	6	3727978	3727983	0 %	0 %	0 %	100 %	Non-Coding
7558	NC_009952	CGC	3	9	3729296	3729304	0 %	0 %	33.33 %	66.67 %	Non-Coding
7559	NC_009952	TCC	2	6	3729332	3729337	0 %	33.33 %	0 %	66.67 %	Non-Coding
7560	NC_009952	GGGA	2	8	3729380	3729387	25 %	0 %	75 %	0 %	Non-Coding
7561	NC_009952	CG	3	6	3729893	3729898	0 %	0 %	50 %	50 %	Non-Coding
7562	NC_009952	C	7	7	3729925	3729931	0 %	0 %	0 %	100 %	Non-Coding
7563	NC_009952	C	6	6	3729947	3729952	0 %	0 %	0 %	100 %	Non-Coding
7564	NC_009952	CAA	2	6	3731799	3731804	66.67 %	0 %	0 %	33.33 %	Non-Coding
7565	NC_009952	GTC	2	6	3731816	3731821	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7566	NC_009952	GC	4	8	3733092	3733099	0 %	0 %	50 %	50 %	Non-Coding
7567	NC_009952	CGCC	2	8	3733105	3733112	0 %	0 %	25 %	75 %	Non-Coding
7568	NC_009952	CGGG	2	8	3733117	3733124	0 %	0 %	75 %	25 %	Non-Coding
7569	NC_009952	CAC	2	6	3733156	3733161	33.33 %	0 %	0 %	66.67 %	Non-Coding
7570	NC_009952	GTGG	2	8	3734031	3734038	0 %	25 %	75 %	0 %	Non-Coding
7571	NC_009952	TA	3	6	3734049	3734054	50 %	50 %	0 %	0 %	Non-Coding
7572	NC_009952	AGC	2	6	3734056	3734061	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7573	NC_009952	CGG	2	6	3736682	3736687	0 %	0 %	66.67 %	33.33 %	Non-Coding
7574	NC_009952	TAA	2	6	3736754	3736759	66.67 %	33.33 %	0 %	0 %	Non-Coding
7575	NC_009952	ATT	2	6	3736769	3736774	33.33 %	66.67 %	0 %	0 %	Non-Coding
7576	NC_009952	GTT	2	6	3736821	3736826	0 %	66.67 %	33.33 %	0 %	Non-Coding
7577	NC_009952	ACGTC	2	10	3736868	3736877	20 %	20 %	20 %	40 %	Non-Coding
7578	NC_009952	AGG	2	6	3736880	3736885	33.33 %	0 %	66.67 %	0 %	Non-Coding
7579	NC_009952	CGGA	2	8	3741765	3741772	25 %	0 %	50 %	25 %	Non-Coding
7580	NC_009952	TGCC	2	8	3741781	3741788	0 %	25 %	25 %	50 %	Non-Coding
7581	NC_009952	GTC	2	6	3741842	3741847	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7582	NC_009952	CG	3	6	3743704	3743709	0 %	0 %	50 %	50 %	Non-Coding
7583	NC_009952	GCG	2	6	3745762	3745767	0 %	0 %	66.67 %	33.33 %	Non-Coding
7584	NC_009952	T	7	7	3745823	3745829	0 %	100 %	0 %	0 %	Non-Coding
7585	NC_009952	GA	3	6	3746453	3746458	50 %	0 %	50 %	0 %	Non-Coding
7586	NC_009952	T	6	6	3751309	3751314	0 %	100 %	0 %	0 %	Non-Coding
7587	NC_009952	TGC	2	6	3751340	3751345	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7588	NC_009952	ACG	2	6	3751389	3751394	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7589	NC_009952	TG	3	6	3751471	3751476	0 %	50 %	50 %	0 %	Non-Coding
7590	NC_009952	GC	3	6	3753241	3753246	0 %	0 %	50 %	50 %	Non-Coding
7591	NC_009952	CGGCC	2	10	3753266	3753275	0 %	0 %	40 %	60 %	Non-Coding
7592	NC_009952	GC	4	8	3754153	3754160	0 %	0 %	50 %	50 %	Non-Coding
7593	NC_009952	CG	3	6	3759346	3759351	0 %	0 %	50 %	50 %	Non-Coding
7594	NC_009952	ACGC	2	8	3760539	3760546	25 %	0 %	25 %	50 %	Non-Coding
7595	NC_009952	TA	3	6	3762621	3762626	50 %	50 %	0 %	0 %	Non-Coding
7596	NC_009952	AGG	2	6	3762627	3762632	33.33 %	0 %	66.67 %	0 %	Non-Coding
7597	NC_009952	TGC	2	6	3762642	3762647	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7598	NC_009952	C	7	7	3762653	3762659	0 %	0 %	0 %	100 %	Non-Coding
7599	NC_009952	GCG	2	6	3763317	3763322	0 %	0 %	66.67 %	33.33 %	Non-Coding
7600	NC_009952	CG	3	6	3763321	3763326	0 %	0 %	50 %	50 %	Non-Coding
7601	NC_009952	TTCC	2	8	3764180	3764187	0 %	50 %	0 %	50 %	Non-Coding
7602	NC_009952	ACA	2	6	3764209	3764214	66.67 %	0 %	0 %	33.33 %	Non-Coding
7603	NC_009952	A	6	6	3764249	3764254	100 %	0 %	0 %	0 %	Non-Coding
7604	NC_009952	CGC	2	6	3764280	3764285	0 %	0 %	33.33 %	66.67 %	Non-Coding
7605	NC_009952	GCC	2	6	3764286	3764291	0 %	0 %	33.33 %	66.67 %	Non-Coding
7606	NC_009952	TGT	2	6	3767166	3767171	0 %	66.67 %	33.33 %	0 %	Non-Coding
7607	NC_009952	TGC	2	6	3767179	3767184	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7608	NC_009952	CAA	2	6	3767189	3767194	66.67 %	0 %	0 %	33.33 %	Non-Coding
7609	NC_009952	AC	3	6	3767199	3767204	50 %	0 %	0 %	50 %	Non-Coding
7610	NC_009952	GCG	2	6	3767210	3767215	0 %	0 %	66.67 %	33.33 %	Non-Coding
7611	NC_009952	TGT	2	6	3767221	3767226	0 %	66.67 %	33.33 %	0 %	Non-Coding
7612	NC_009952	GC	3	6	3770500	3770505	0 %	0 %	50 %	50 %	Non-Coding
7613	NC_009952	GC	3	6	3770565	3770570	0 %	0 %	50 %	50 %	Non-Coding
7614	NC_009952	CCG	2	6	3774142	3774147	0 %	0 %	33.33 %	66.67 %	Non-Coding
7615	NC_009952	GCG	2	6	3774760	3774765	0 %	0 %	66.67 %	33.33 %	Non-Coding
7616	NC_009952	CCGGT	2	10	3774766	3774775	0 %	20 %	40 %	40 %	Non-Coding
7617	NC_009952	AAG	2	6	3774802	3774807	66.67 %	0 %	33.33 %	0 %	Non-Coding
7618	NC_009952	CG	3	6	3776130	3776135	0 %	0 %	50 %	50 %	Non-Coding
7619	NC_009952	GGC	2	6	3779641	3779646	0 %	0 %	66.67 %	33.33 %	Non-Coding
7620	NC_009952	G	6	6	3779778	3779783	0 %	0 %	100 %	0 %	Non-Coding
7621	NC_009952	CGC	2	6	3779822	3779827	0 %	0 %	33.33 %	66.67 %	Non-Coding
7622	NC_009952	GC	3	6	3779908	3779913	0 %	0 %	50 %	50 %	Non-Coding
7623	NC_009952	GC	3	6	3779932	3779937	0 %	0 %	50 %	50 %	Non-Coding
7624	NC_009952	CGA	2	6	3779946	3779951	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7625	NC_009952	CGCT	2	8	3779976	3779983	0 %	25 %	25 %	50 %	Non-Coding
7626	NC_009952	GAC	2	6	3779993	3779998	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7627	NC_009952	GCC	2	6	3782730	3782735	0 %	0 %	33.33 %	66.67 %	Non-Coding
7628	NC_009952	CG	3	6	3782767	3782772	0 %	0 %	50 %	50 %	Non-Coding
7629	NC_009952	GCG	3	9	3782770	3782778	0 %	0 %	66.67 %	33.33 %	Non-Coding
7630	NC_009952	CCAGA	2	10	3782785	3782794	40 %	0 %	20 %	40 %	Non-Coding
7631	NC_009952	ACA	2	6	3782807	3782812	66.67 %	0 %	0 %	33.33 %	Non-Coding
7632	NC_009952	GCG	2	6	3782813	3782818	0 %	0 %	66.67 %	33.33 %	Non-Coding
7633	NC_009952	CCA	2	6	3782891	3782896	33.33 %	0 %	0 %	66.67 %	Non-Coding
7634	NC_009952	CGT	2	6	3782944	3782949	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7635	NC_009952	GTAC	2	8	3782957	3782964	25 %	25 %	25 %	25 %	Non-Coding
7636	NC_009952	GGC	2	6	3783024	3783029	0 %	0 %	66.67 %	33.33 %	Non-Coding
7637	NC_009952	AGG	2	6	3783065	3783070	33.33 %	0 %	66.67 %	0 %	Non-Coding
7638	NC_009952	CA	3	6	3788364	3788369	50 %	0 %	0 %	50 %	Non-Coding
7639	NC_009952	ACA	2	6	3788419	3788424	66.67 %	0 %	0 %	33.33 %	Non-Coding
7640	NC_009952	TAA	2	6	3788600	3788605	66.67 %	33.33 %	0 %	0 %	Non-Coding
7641	NC_009952	CCG	2	6	3788641	3788646	0 %	0 %	33.33 %	66.67 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.