MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Corynebacterium efficiens YS-314 plasmid pCE2

Total Repeats: 116

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_004319	CGA	2	6	18	23	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_004319	GAA	2	6	29	34	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_004319	CAT	2	6	84	89	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_004319	CAC	2	6	127	132	33.33 %	0 %	0 %	66.67 %	Non-Coding
5	NC_004319	CCG	2	6	1882	1887	0 %	0 %	33.33 %	66.67 %	Non-Coding
6	NC_004319	CGG	2	6	1928	1933	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_004319	TATG	2	8	2024	2031	25 %	50 %	25 %	0 %	Non-Coding
8	NC_004319	GAT	2	6	2104	2109	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_004319	AAT	2	6	2291	2296	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_004319	GTT	2	6	2301	2306	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_004319	TGC	2	6	2343	2348	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_004319	CTCG	2	8	2357	2364	0 %	25 %	25 %	50 %	Non-Coding
13	NC_004319	GTT	2	6	2418	2423	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_004319	AAC	2	6	2432	2437	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_004319	CCCG	2	8	2445	2452	0 %	0 %	25 %	75 %	Non-Coding
16	NC_004319	GGT	2	6	2501	2506	0 %	33.33 %	66.67 %	0 %	Non-Coding
17	NC_004319	CAC	2	6	2522	2527	33.33 %	0 %	0 %	66.67 %	Non-Coding
18	NC_004319	CACC	2	8	2532	2539	25 %	0 %	0 %	75 %	Non-Coding
19	NC_004319	GAAG	2	8	6019	6026	50 %	0 %	50 %	0 %	Non-Coding
20	NC_004319	CCT	2	6	6039	6044	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_004319	TTTA	2	8	6045	6052	25 %	75 %	0 %	0 %	Non-Coding
22	NC_004319	GGT	2	6	6074	6079	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_004319	T	6	6	6090	6095	0 %	100 %	0 %	0 %	Non-Coding
24	NC_004319	T	6	6	6098	6103	0 %	100 %	0 %	0 %	Non-Coding
25	NC_004319	ATC	2	6	6117	6122	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_004319	ATC	2	6	6162	6167	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_004319	A	6	6	6301	6306	100 %	0 %	0 %	0 %	Non-Coding
28	NC_004319	CTAG	2	8	6385	6392	25 %	25 %	25 %	25 %	Non-Coding
29	NC_004319	TGA	2	6	6401	6406	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_004319	A	6	6	6456	6461	100 %	0 %	0 %	0 %	Non-Coding
31	NC_004319	T	6	6	6462	6467	0 %	100 %	0 %	0 %	Non-Coding
32	NC_004319	GAT	2	6	6472	6477	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
33	NC_004319	TCG	2	6	6547	6552	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_004319	CCT	2	6	6568	6573	0 %	33.33 %	0 %	66.67 %	Non-Coding
35	NC_004319	TAT	2	6	6661	6666	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_004319	G	8	8	6830	6837	0 %	0 %	100 %	0 %	Non-Coding
37	NC_004319	ATT	2	6	6890	6895	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_004319	GAA	2	6	6926	6931	66.67 %	0 %	33.33 %	0 %	Non-Coding
39	NC_004319	A	6	6	6930	6935	100 %	0 %	0 %	0 %	Non-Coding
40	NC_004319	GAG	2	6	6978	6983	33.33 %	0 %	66.67 %	0 %	Non-Coding
41	NC_004319	AGCT	2	8	7051	7058	25 %	25 %	25 %	25 %	Non-Coding
42	NC_004319	AG	3	6	7122	7127	50 %	0 %	50 %	0 %	Non-Coding
43	NC_004319	TACT	2	8	7141	7148	25 %	50 %	0 %	25 %	Non-Coding
44	NC_004319	GTA	2	6	7159	7164	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_004319	ACTACA	2	12	7236	7247	50 %	16.67 %	0 %	33.33 %	Non-Coding
46	NC_004319	AAG	2	6	8170	8175	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_004319	GTC	2	6	8256	8261	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
48	NC_004319	CCA	2	6	8310	8315	33.33 %	0 %	0 %	66.67 %	Non-Coding
49	NC_004319	TGG	2	6	8325	8330	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_004319	GCT	2	6	8368	8373	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_004319	T	6	6	9951	9956	0 %	100 %	0 %	0 %	Non-Coding
52	NC_004319	GTG	2	6	10074	10079	0 %	33.33 %	66.67 %	0 %	Non-Coding
53	NC_004319	TGG	2	6	10174	10179	0 %	33.33 %	66.67 %	0 %	Non-Coding
54	NC_004319	TTG	2	6	10200	10205	0 %	66.67 %	33.33 %	0 %	Non-Coding
55	NC_004319	GTC	2	6	10214	10219	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_004319	ACG	2	6	10264	10269	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_004319	GAA	2	6	10270	10275	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_004319	GTG	2	6	10297	10302	0 %	33.33 %	66.67 %	0 %	Non-Coding
59	NC_004319	GAC	2	6	10320	10325	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_004319	ACC	2	6	10345	10350	33.33 %	0 %	0 %	66.67 %	Non-Coding
61	NC_004319	GCT	2	6	11703	11708	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_004319	CAC	2	6	11786	11791	33.33 %	0 %	0 %	66.67 %	Non-Coding
63	NC_004319	C	6	6	11890	11895	0 %	0 %	0 %	100 %	Non-Coding
64	NC_004319	ATTT	2	8	11922	11929	25 %	75 %	0 %	0 %	Non-Coding
65	NC_004319	T	7	7	11932	11938	0 %	100 %	0 %	0 %	Non-Coding
66	NC_004319	TCTTA	2	10	11947	11956	20 %	60 %	0 %	20 %	Non-Coding
67	NC_004319	ATC	2	6	11959	11964	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
68	NC_004319	AAG	2	6	12893	12898	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_004319	CAG	2	6	13053	13058	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
70	NC_004319	T	6	6	13079	13084	0 %	100 %	0 %	0 %	Non-Coding
71	NC_004319	TGC	2	6	13104	13109	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_004319	TGC	2	6	13186	13191	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
73	NC_004319	ATC	2	6	13193	13198	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_004319	T	6	6	13554	13559	0 %	100 %	0 %	0 %	Non-Coding
75	NC_004319	GAA	2	6	13672	13677	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_004319	ATGA	2	8	13753	13760	50 %	25 %	25 %	0 %	Non-Coding
77	NC_004319	CTGC	2	8	13769	13776	0 %	25 %	25 %	50 %	Non-Coding
78	NC_004319	GCG	2	6	14880	14885	0 %	0 %	66.67 %	33.33 %	Non-Coding
79	NC_004319	GAC	3	9	16439	16447	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
80	NC_004319	TGG	2	6	16480	16485	0 %	33.33 %	66.67 %	0 %	Non-Coding
81	NC_004319	CGG	2	6	16524	16529	0 %	0 %	66.67 %	33.33 %	Non-Coding
82	NC_004319	TCA	2	6	16628	16633	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_004319	CAGGG	2	10	16647	16656	20 %	0 %	60 %	20 %	Non-Coding
84	NC_004319	CAC	2	6	17362	17367	33.33 %	0 %	0 %	66.67 %	Non-Coding
85	NC_004319	GCCA	2	8	17392	17399	25 %	0 %	25 %	50 %	Non-Coding
86	NC_004319	GAA	2	6	17402	17407	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_004319	ATG	2	6	17443	17448	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_004319	GAA	2	6	17451	17456	66.67 %	0 %	33.33 %	0 %	Non-Coding
89	NC_004319	CGT	2	6	17472	17477	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
90	NC_004319	TATC	2	8	17487	17494	25 %	50 %	0 %	25 %	Non-Coding
91	NC_004319	A	7	7	17539	17545	100 %	0 %	0 %	0 %	Non-Coding
92	NC_004319	ATT	2	6	17556	17561	33.33 %	66.67 %	0 %	0 %	Non-Coding
93	NC_004319	GTA	2	6	17659	17664	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_004319	TGT	2	6	17700	17705	0 %	66.67 %	33.33 %	0 %	Non-Coding
95	NC_004319	GCA	2	6	17732	17737	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
96	NC_004319	ATT	2	6	17758	17763	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_004319	CCA	2	6	17771	17776	33.33 %	0 %	0 %	66.67 %	Non-Coding
98	NC_004319	GA	3	6	17787	17792	50 %	0 %	50 %	0 %	Non-Coding
99	NC_004319	TG	3	6	17804	17809	0 %	50 %	50 %	0 %	Non-Coding
100	NC_004319	AGC	2	6	17860	17865	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
101	NC_004319	TCC	2	6	18008	18013	0 %	33.33 %	0 %	66.67 %	Non-Coding
102	NC_004319	CTT	2	6	18048	18053	0 %	66.67 %	0 %	33.33 %	Non-Coding
103	NC_004319	TCT	2	6	18104	18109	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_004319	AAGC	2	8	18153	18160	50 %	0 %	25 %	25 %	Non-Coding
105	NC_004319	TTC	2	6	18166	18171	0 %	66.67 %	0 %	33.33 %	Non-Coding
106	NC_004319	CCA	2	6	18172	18177	33.33 %	0 %	0 %	66.67 %	Non-Coding
107	NC_004319	AGA	2	6	18199	18204	66.67 %	0 %	33.33 %	0 %	Non-Coding
108	NC_004319	ACT	2	6	18368	18373	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
109	NC_004319	CTT	2	6	18390	18395	0 %	66.67 %	0 %	33.33 %	Non-Coding
110	NC_004319	GA	3	6	18418	18423	50 %	0 %	50 %	0 %	Non-Coding
111	NC_004319	A	6	6	18954	18959	100 %	0 %	0 %	0 %	Non-Coding
112	NC_004319	CAG	2	6	19018	19023	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
113	NC_004319	ACC	2	6	19059	19064	33.33 %	0 %	0 %	66.67 %	Non-Coding
114	NC_004319	CAT	2	6	20746	20751	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
115	NC_004319	TCG	2	6	22510	22515	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
116	NC_004319	TGGC	2	8	23734	23741	0 %	25 %	50 %	25 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.