All Coding Repeats of Chlamydophila caviae GPIC plasmid pCpGP1
Total Repeats: 127
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_004720 | ATTA | 2 | 8 | 683 | 690 | 50 % | 50 % | 0 % | 0 % | 29839221 |
2 | NC_004720 | AAG | 2 | 6 | 691 | 696 | 66.67 % | 0 % | 33.33 % | 0 % | 29839221 |
3 | NC_004720 | T | 6 | 6 | 705 | 710 | 0 % | 100 % | 0 % | 0 % | 29839221 |
4 | NC_004720 | A | 7 | 7 | 712 | 718 | 100 % | 0 % | 0 % | 0 % | 29839221 |
5 | NC_004720 | A | 6 | 6 | 747 | 752 | 100 % | 0 % | 0 % | 0 % | 29839221 |
6 | NC_004720 | GAAA | 2 | 8 | 797 | 804 | 75 % | 0 % | 25 % | 0 % | 29839221 |
7 | NC_004720 | A | 6 | 6 | 802 | 807 | 100 % | 0 % | 0 % | 0 % | 29839221 |
8 | NC_004720 | GAT | 2 | 6 | 843 | 848 | 33.33 % | 33.33 % | 33.33 % | 0 % | 29839221 |
9 | NC_004720 | ACA | 2 | 6 | 911 | 916 | 66.67 % | 0 % | 0 % | 33.33 % | 29839221 |
10 | NC_004720 | A | 6 | 6 | 934 | 939 | 100 % | 0 % | 0 % | 0 % | 29839221 |
11 | NC_004720 | AG | 3 | 6 | 951 | 956 | 50 % | 0 % | 50 % | 0 % | 29839221 |
12 | NC_004720 | ACA | 2 | 6 | 984 | 989 | 66.67 % | 0 % | 0 % | 33.33 % | 29839221 |
13 | NC_004720 | TCT | 2 | 6 | 1026 | 1031 | 0 % | 66.67 % | 0 % | 33.33 % | 29839221 |
14 | NC_004720 | TTAT | 2 | 8 | 1059 | 1066 | 25 % | 75 % | 0 % | 0 % | 29839221 |
15 | NC_004720 | TCAA | 2 | 8 | 1100 | 1107 | 50 % | 25 % | 0 % | 25 % | 29839221 |
16 | NC_004720 | CTTA | 2 | 8 | 1123 | 1130 | 25 % | 50 % | 0 % | 25 % | 29839221 |
17 | NC_004720 | CCTT | 2 | 8 | 1233 | 1240 | 0 % | 50 % | 0 % | 50 % | 29839221 |
18 | NC_004720 | GT | 3 | 6 | 1326 | 1331 | 0 % | 50 % | 50 % | 0 % | 29839221 |
19 | NC_004720 | ACA | 2 | 6 | 1354 | 1359 | 66.67 % | 0 % | 0 % | 33.33 % | 29839221 |
20 | NC_004720 | ACA | 2 | 6 | 1370 | 1375 | 66.67 % | 0 % | 0 % | 33.33 % | 29839221 |
21 | NC_004720 | ATT | 2 | 6 | 1670 | 1675 | 33.33 % | 66.67 % | 0 % | 0 % | 29839222 |
22 | NC_004720 | AGC | 2 | 6 | 1691 | 1696 | 33.33 % | 0 % | 33.33 % | 33.33 % | 29839222 |
23 | NC_004720 | AAGA | 2 | 8 | 1730 | 1737 | 75 % | 0 % | 25 % | 0 % | 29839222 |
24 | NC_004720 | TAA | 2 | 6 | 1769 | 1774 | 66.67 % | 33.33 % | 0 % | 0 % | 29839222 |
25 | NC_004720 | ACTTAT | 2 | 12 | 1854 | 1865 | 33.33 % | 50 % | 0 % | 16.67 % | 29839222 |
26 | NC_004720 | AGC | 2 | 6 | 1904 | 1909 | 33.33 % | 0 % | 33.33 % | 33.33 % | 29839222 |
27 | NC_004720 | GTT | 2 | 6 | 1956 | 1961 | 0 % | 66.67 % | 33.33 % | 0 % | 29839222 |
28 | NC_004720 | AAGA | 2 | 8 | 2043 | 2050 | 75 % | 0 % | 25 % | 0 % | 29839222 |
29 | NC_004720 | GTT | 2 | 6 | 2054 | 2059 | 0 % | 66.67 % | 33.33 % | 0 % | 29839222 |
30 | NC_004720 | A | 6 | 6 | 2205 | 2210 | 100 % | 0 % | 0 % | 0 % | 29839222 |
31 | NC_004720 | AAG | 2 | 6 | 2227 | 2232 | 66.67 % | 0 % | 33.33 % | 0 % | 29839222 |
32 | NC_004720 | ATCTT | 2 | 10 | 2273 | 2282 | 20 % | 60 % | 0 % | 20 % | 29839222 |
33 | NC_004720 | AG | 3 | 6 | 2289 | 2294 | 50 % | 0 % | 50 % | 0 % | 29839222 |
34 | NC_004720 | AG | 3 | 6 | 2313 | 2318 | 50 % | 0 % | 50 % | 0 % | 29839222 |
35 | NC_004720 | TAT | 3 | 9 | 2346 | 2354 | 33.33 % | 66.67 % | 0 % | 0 % | 29839222 |
36 | NC_004720 | AAT | 2 | 6 | 2462 | 2467 | 66.67 % | 33.33 % | 0 % | 0 % | 29839222 |
37 | NC_004720 | TGAC | 2 | 8 | 2521 | 2528 | 25 % | 25 % | 25 % | 25 % | 29839222 |
38 | NC_004720 | T | 6 | 6 | 2637 | 2642 | 0 % | 100 % | 0 % | 0 % | 29839223 |
39 | NC_004720 | TGT | 2 | 6 | 2658 | 2663 | 0 % | 66.67 % | 33.33 % | 0 % | 29839223 |
40 | NC_004720 | AAC | 2 | 6 | 2732 | 2737 | 66.67 % | 0 % | 0 % | 33.33 % | 29839223 |
41 | NC_004720 | GTT | 2 | 6 | 2840 | 2845 | 0 % | 66.67 % | 33.33 % | 0 % | 29839223 |
42 | NC_004720 | GTT | 2 | 6 | 2950 | 2955 | 0 % | 66.67 % | 33.33 % | 0 % | 29839223 |
43 | NC_004720 | TACTTT | 2 | 12 | 2969 | 2980 | 16.67 % | 66.67 % | 0 % | 16.67 % | 29839223 |
44 | NC_004720 | GAA | 2 | 6 | 3062 | 3067 | 66.67 % | 0 % | 33.33 % | 0 % | 29839223 |
45 | NC_004720 | T | 6 | 6 | 3101 | 3106 | 0 % | 100 % | 0 % | 0 % | 29839223 |
46 | NC_004720 | TCAT | 2 | 8 | 3139 | 3146 | 25 % | 50 % | 0 % | 25 % | 29839223 |
47 | NC_004720 | TTA | 2 | 6 | 3187 | 3192 | 33.33 % | 66.67 % | 0 % | 0 % | 29839223 |
48 | NC_004720 | TGC | 2 | 6 | 3273 | 3278 | 0 % | 33.33 % | 33.33 % | 33.33 % | 29839223 |
49 | NC_004720 | TGT | 2 | 6 | 3350 | 3355 | 0 % | 66.67 % | 33.33 % | 0 % | 29839223 |
50 | NC_004720 | ATT | 2 | 6 | 3453 | 3458 | 33.33 % | 66.67 % | 0 % | 0 % | 29839223 |
51 | NC_004720 | AGAA | 2 | 8 | 3537 | 3544 | 75 % | 0 % | 25 % | 0 % | 29839223 |
52 | NC_004720 | CA | 4 | 8 | 3627 | 3634 | 50 % | 0 % | 0 % | 50 % | 29839223 |
53 | NC_004720 | AG | 4 | 8 | 3753 | 3760 | 50 % | 0 % | 50 % | 0 % | 29839224 |
54 | NC_004720 | T | 6 | 6 | 3778 | 3783 | 0 % | 100 % | 0 % | 0 % | 29839224 |
55 | NC_004720 | ATTTCT | 2 | 12 | 3919 | 3930 | 16.67 % | 66.67 % | 0 % | 16.67 % | 29839224 |
56 | NC_004720 | GAG | 2 | 6 | 3940 | 3945 | 33.33 % | 0 % | 66.67 % | 0 % | 29839224 |
57 | NC_004720 | AGA | 2 | 6 | 3952 | 3957 | 66.67 % | 0 % | 33.33 % | 0 % | 29839224 |
58 | NC_004720 | ACC | 2 | 6 | 4031 | 4036 | 33.33 % | 0 % | 0 % | 66.67 % | 29839224 |
59 | NC_004720 | AAC | 2 | 6 | 4066 | 4071 | 66.67 % | 0 % | 0 % | 33.33 % | 29839224 |
60 | NC_004720 | CTT | 2 | 6 | 4072 | 4077 | 0 % | 66.67 % | 0 % | 33.33 % | 29839224 |
61 | NC_004720 | GAC | 2 | 6 | 4171 | 4176 | 33.33 % | 0 % | 33.33 % | 33.33 % | 29839224 |
62 | NC_004720 | A | 7 | 7 | 4183 | 4189 | 100 % | 0 % | 0 % | 0 % | 29839224 |
63 | NC_004720 | A | 6 | 6 | 4206 | 4211 | 100 % | 0 % | 0 % | 0 % | 29839224 |
64 | NC_004720 | TGA | 2 | 6 | 4248 | 4253 | 33.33 % | 33.33 % | 33.33 % | 0 % | 29839224 |
65 | NC_004720 | GAA | 2 | 6 | 4257 | 4262 | 66.67 % | 0 % | 33.33 % | 0 % | 29839224 |
66 | NC_004720 | ATTAT | 2 | 10 | 4369 | 4378 | 40 % | 60 % | 0 % | 0 % | 29839224 |
67 | NC_004720 | TGT | 3 | 9 | 4392 | 4400 | 0 % | 66.67 % | 33.33 % | 0 % | 29839224 |
68 | NC_004720 | TTTCA | 2 | 10 | 4485 | 4494 | 20 % | 60 % | 0 % | 20 % | 29839224 |
69 | NC_004720 | GTA | 2 | 6 | 4528 | 4533 | 33.33 % | 33.33 % | 33.33 % | 0 % | 29839224 |
70 | NC_004720 | T | 7 | 7 | 4638 | 4644 | 0 % | 100 % | 0 % | 0 % | 29839224 |
71 | NC_004720 | GA | 3 | 6 | 4701 | 4706 | 50 % | 0 % | 50 % | 0 % | 29839224 |
72 | NC_004720 | TTTA | 2 | 8 | 4725 | 4732 | 25 % | 75 % | 0 % | 0 % | 29839224 |
73 | NC_004720 | TTAC | 2 | 8 | 4737 | 4744 | 25 % | 50 % | 0 % | 25 % | 29839224 |
74 | NC_004720 | CAAA | 2 | 8 | 4757 | 4764 | 75 % | 0 % | 0 % | 25 % | 29839224 |
75 | NC_004720 | TG | 3 | 6 | 4845 | 4850 | 0 % | 50 % | 50 % | 0 % | 29839224 |
76 | NC_004720 | AGA | 2 | 6 | 4875 | 4880 | 66.67 % | 0 % | 33.33 % | 0 % | 29839224 |
77 | NC_004720 | ATT | 2 | 6 | 4953 | 4958 | 33.33 % | 66.67 % | 0 % | 0 % | 29839224 |
78 | NC_004720 | ATT | 3 | 9 | 4973 | 4981 | 33.33 % | 66.67 % | 0 % | 0 % | 29839224 |
79 | NC_004720 | AAG | 2 | 6 | 4985 | 4990 | 66.67 % | 0 % | 33.33 % | 0 % | 29839224 |
80 | NC_004720 | ATC | 3 | 9 | 5011 | 5019 | 33.33 % | 33.33 % | 0 % | 33.33 % | 29839224 |
81 | NC_004720 | AGAA | 2 | 8 | 5093 | 5100 | 75 % | 0 % | 25 % | 0 % | 29839224 |
82 | NC_004720 | GAA | 2 | 6 | 5164 | 5169 | 66.67 % | 0 % | 33.33 % | 0 % | 29839225 |
83 | NC_004720 | AGA | 2 | 6 | 5183 | 5188 | 66.67 % | 0 % | 33.33 % | 0 % | 29839225 |
84 | NC_004720 | GCT | 2 | 6 | 5277 | 5282 | 0 % | 33.33 % | 33.33 % | 33.33 % | 29839225 |
85 | NC_004720 | A | 6 | 6 | 5427 | 5432 | 100 % | 0 % | 0 % | 0 % | 29839225 |
86 | NC_004720 | GAAT | 2 | 8 | 5453 | 5460 | 50 % | 25 % | 25 % | 0 % | 29839225 |
87 | NC_004720 | TGG | 2 | 6 | 5462 | 5467 | 0 % | 33.33 % | 66.67 % | 0 % | 29839225 |
88 | NC_004720 | AAG | 2 | 6 | 5470 | 5475 | 66.67 % | 0 % | 33.33 % | 0 % | 29839225 |
89 | NC_004720 | GTT | 2 | 6 | 5565 | 5570 | 0 % | 66.67 % | 33.33 % | 0 % | 29839225 |
90 | NC_004720 | GAA | 2 | 6 | 5655 | 5660 | 66.67 % | 0 % | 33.33 % | 0 % | 29839225 |
91 | NC_004720 | A | 6 | 6 | 5682 | 5687 | 100 % | 0 % | 0 % | 0 % | 29839225 |
92 | NC_004720 | TCA | 2 | 6 | 5698 | 5703 | 33.33 % | 33.33 % | 0 % | 33.33 % | 29839225 |
93 | NC_004720 | TAT | 2 | 6 | 5717 | 5722 | 33.33 % | 66.67 % | 0 % | 0 % | 29839225 |
94 | NC_004720 | TTTTG | 2 | 10 | 5744 | 5753 | 0 % | 80 % | 20 % | 0 % | 29839225 |
95 | NC_004720 | CAA | 2 | 6 | 5845 | 5850 | 66.67 % | 0 % | 0 % | 33.33 % | 29839225 |
96 | NC_004720 | GAAA | 2 | 8 | 5851 | 5858 | 75 % | 0 % | 25 % | 0 % | 29839225 |
97 | NC_004720 | AAATAG | 2 | 12 | 5893 | 5904 | 66.67 % | 16.67 % | 16.67 % | 0 % | 29839225 |
98 | NC_004720 | A | 7 | 7 | 5964 | 5970 | 100 % | 0 % | 0 % | 0 % | 29839225 |
99 | NC_004720 | A | 6 | 6 | 6060 | 6065 | 100 % | 0 % | 0 % | 0 % | 29839225 |
100 | NC_004720 | CAA | 2 | 6 | 6096 | 6101 | 66.67 % | 0 % | 0 % | 33.33 % | 29839225 |
101 | NC_004720 | CAA | 2 | 6 | 6106 | 6111 | 66.67 % | 0 % | 0 % | 33.33 % | 29839225 |
102 | NC_004720 | ACA | 2 | 6 | 6129 | 6134 | 66.67 % | 0 % | 0 % | 33.33 % | 29839225 |
103 | NC_004720 | AAT | 2 | 6 | 6138 | 6143 | 66.67 % | 33.33 % | 0 % | 0 % | 29839225 |
104 | NC_004720 | ACA | 2 | 6 | 6226 | 6231 | 66.67 % | 0 % | 0 % | 33.33 % | 29839226 |
105 | NC_004720 | CAA | 2 | 6 | 6294 | 6299 | 66.67 % | 0 % | 0 % | 33.33 % | 29839226 |
106 | NC_004720 | AAC | 2 | 6 | 6311 | 6316 | 66.67 % | 0 % | 0 % | 33.33 % | 29839226 |
107 | NC_004720 | AAG | 2 | 6 | 6349 | 6354 | 66.67 % | 0 % | 33.33 % | 0 % | 29839226 |
108 | NC_004720 | AAT | 2 | 6 | 6387 | 6392 | 66.67 % | 33.33 % | 0 % | 0 % | 29839226 |
109 | NC_004720 | TAG | 2 | 6 | 6463 | 6468 | 33.33 % | 33.33 % | 33.33 % | 0 % | 29839226 |
110 | NC_004720 | TAT | 2 | 6 | 6473 | 6478 | 33.33 % | 66.67 % | 0 % | 0 % | 29839226 |
111 | NC_004720 | AAG | 2 | 6 | 6505 | 6510 | 66.67 % | 0 % | 33.33 % | 0 % | 29839226 |
112 | NC_004720 | AAT | 2 | 6 | 6521 | 6526 | 66.67 % | 33.33 % | 0 % | 0 % | 29839226 |
113 | NC_004720 | G | 6 | 6 | 6633 | 6638 | 0 % | 0 % | 100 % | 0 % | 29839226 |
114 | NC_004720 | ATC | 2 | 6 | 6705 | 6710 | 33.33 % | 33.33 % | 0 % | 33.33 % | 29839226 |
115 | NC_004720 | TGT | 2 | 6 | 6731 | 6736 | 0 % | 66.67 % | 33.33 % | 0 % | 29839226 |
116 | NC_004720 | AAGG | 2 | 8 | 6750 | 6757 | 50 % | 0 % | 50 % | 0 % | 29839226 |
117 | NC_004720 | GTTA | 2 | 8 | 6777 | 6784 | 25 % | 50 % | 25 % | 0 % | 29839226 |
118 | NC_004720 | TGTT | 2 | 8 | 6809 | 6816 | 0 % | 75 % | 25 % | 0 % | 29839226 |
119 | NC_004720 | GTG | 2 | 6 | 6889 | 6894 | 0 % | 33.33 % | 66.67 % | 0 % | 29839226 |
120 | NC_004720 | ACA | 4 | 12 | 6939 | 6950 | 66.67 % | 0 % | 0 % | 33.33 % | 29839226 |
121 | NC_004720 | AT | 3 | 6 | 6955 | 6960 | 50 % | 50 % | 0 % | 0 % | 29839226 |
122 | NC_004720 | ACA | 2 | 6 | 6977 | 6982 | 66.67 % | 0 % | 0 % | 33.33 % | 29839226 |
123 | NC_004720 | TAA | 2 | 6 | 6993 | 6998 | 66.67 % | 33.33 % | 0 % | 0 % | 29839226 |
124 | NC_004720 | ATGA | 2 | 8 | 7093 | 7100 | 50 % | 25 % | 25 % | 0 % | 29839227 |
125 | NC_004720 | A | 6 | 6 | 7193 | 7198 | 100 % | 0 % | 0 % | 0 % | 29839227 |
126 | NC_004720 | T | 6 | 6 | 7203 | 7208 | 0 % | 100 % | 0 % | 0 % | 29839227 |
127 | NC_004720 | A | 6 | 6 | 7342 | 7347 | 100 % | 0 % | 0 % | 0 % | 29839227 |