MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Borrelia afzelii PKo plasmid cp32-11

Total Repeats: 90

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017224	TAT	2	6	30	35	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017224	AC	3	6	36	41	50 %	0 %	0 %	50 %	Non-Coding
3	NC_017224	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017224	AGG	2	6	3347	3352	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_017224	AGG	2	6	3941	3946	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_017224	ACT	2	6	13693	13698	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_017224	TA	3	6	15172	15177	50 %	50 %	0 %	0 %	Non-Coding
8	NC_017224	TA	3	6	15181	15186	50 %	50 %	0 %	0 %	Non-Coding
9	NC_017224	TAA	2	6	15383	15388	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017224	A	6	6	15396	15401	100 %	0 %	0 %	0 %	Non-Coding
11	NC_017224	GTT	2	6	16445	16450	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_017224	CTAA	2	8	16491	16498	50 %	25 %	0 %	25 %	Non-Coding
13	NC_017224	ATA	2	6	16507	16512	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017224	AAT	2	6	17129	17134	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017224	AT	3	6	17142	17147	50 %	50 %	0 %	0 %	Non-Coding
16	NC_017224	AAC	2	6	17174	17179	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_017224	AT	3	6	17202	17207	50 %	50 %	0 %	0 %	Non-Coding
18	NC_017224	T	6	6	17221	17226	0 %	100 %	0 %	0 %	Non-Coding
19	NC_017224	ATT	2	6	17235	17240	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017224	A	9	9	17252	17260	100 %	0 %	0 %	0 %	Non-Coding
21	NC_017224	AAT	2	6	17959	17964	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017224	C	6	6	17979	17984	0 %	0 %	0 %	100 %	Non-Coding
23	NC_017224	GGTA	2	8	18007	18014	25 %	25 %	50 %	0 %	Non-Coding
24	NC_017224	TCC	2	6	19041	19046	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_017224	GTTA	2	8	19049	19056	25 %	50 %	25 %	0 %	Non-Coding
26	NC_017224	TA	3	6	19065	19070	50 %	50 %	0 %	0 %	Non-Coding
27	NC_017224	T	6	6	19174	19179	0 %	100 %	0 %	0 %	Non-Coding
28	NC_017224	AATC	2	8	19262	19269	50 %	25 %	0 %	25 %	Non-Coding
29	NC_017224	TAAT	2	8	19297	19304	50 %	50 %	0 %	0 %	Non-Coding
30	NC_017224	TAA	2	6	19310	19315	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017224	T	7	7	19329	19335	0 %	100 %	0 %	0 %	Non-Coding
32	NC_017224	ATT	2	6	19381	19386	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017224	TAAC	2	8	19389	19396	50 %	25 %	0 %	25 %	Non-Coding
34	NC_017224	ATTT	2	8	21330	21337	25 %	75 %	0 %	0 %	Non-Coding
35	NC_017224	A	6	6	21368	21373	100 %	0 %	0 %	0 %	Non-Coding
36	NC_017224	AAT	2	6	22300	22305	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_017224	AT	3	6	22327	22332	50 %	50 %	0 %	0 %	Non-Coding
38	NC_017224	ATTTT	2	10	22365	22374	20 %	80 %	0 %	0 %	Non-Coding
39	NC_017224	T	7	7	22434	22440	0 %	100 %	0 %	0 %	Non-Coding
40	NC_017224	A	6	6	22500	22505	100 %	0 %	0 %	0 %	Non-Coding
41	NC_017224	T	7	7	22509	22515	0 %	100 %	0 %	0 %	Non-Coding
42	NC_017224	TTA	2	6	22547	22552	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_017224	T	6	6	22585	22590	0 %	100 %	0 %	0 %	Non-Coding
44	NC_017224	ATA	2	6	22623	22628	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017224	ATA	2	6	22637	22642	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017224	TGG	2	6	22682	22687	0 %	33.33 %	66.67 %	0 %	Non-Coding
47	NC_017224	T	7	7	22730	22736	0 %	100 %	0 %	0 %	Non-Coding
48	NC_017224	A	6	6	22762	22767	100 %	0 %	0 %	0 %	Non-Coding
49	NC_017224	TA	4	8	22782	22789	50 %	50 %	0 %	0 %	Non-Coding
50	NC_017224	AT	3	6	22793	22798	50 %	50 %	0 %	0 %	Non-Coding
51	NC_017224	A	8	8	22802	22809	100 %	0 %	0 %	0 %	Non-Coding
52	NC_017224	TAT	2	6	22815	22820	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_017224	T	6	6	22885	22890	0 %	100 %	0 %	0 %	Non-Coding
54	NC_017224	A	6	6	22905	22910	100 %	0 %	0 %	0 %	Non-Coding
55	NC_017224	TA	3	6	22932	22937	50 %	50 %	0 %	0 %	Non-Coding
56	NC_017224	ATT	2	6	22938	22943	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017224	TAAC	2	8	22946	22953	50 %	25 %	0 %	25 %	Non-Coding
58	NC_017224	AGG	2	6	22955	22960	33.33 %	0 %	66.67 %	0 %	Non-Coding
59	NC_017224	A	6	6	24312	24317	100 %	0 %	0 %	0 %	Non-Coding
60	NC_017224	A	7	7	24320	24326	100 %	0 %	0 %	0 %	Non-Coding
61	NC_017224	AAGTAA	2	12	25593	25604	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
62	NC_017224	AT	3	6	25610	25615	50 %	50 %	0 %	0 %	Non-Coding
63	NC_017224	TTTTA	2	10	25628	25637	20 %	80 %	0 %	0 %	Non-Coding
64	NC_017224	AGT	2	6	25702	25707	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
65	NC_017224	TAA	2	6	25710	25715	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_017224	G	6	6	25736	25741	0 %	0 %	100 %	0 %	Non-Coding
67	NC_017224	CA	3	6	25742	25747	50 %	0 %	0 %	50 %	Non-Coding
68	NC_017224	TA	3	6	25756	25761	50 %	50 %	0 %	0 %	Non-Coding
69	NC_017224	TG	3	6	25765	25770	0 %	50 %	50 %	0 %	Non-Coding
70	NC_017224	AT	3	6	25771	25776	50 %	50 %	0 %	0 %	Non-Coding
71	NC_017224	ATTTG	2	10	25792	25801	20 %	60 %	20 %	0 %	Non-Coding
72	NC_017224	GA	3	6	25846	25851	50 %	0 %	50 %	0 %	Non-Coding
73	NC_017224	A	6	6	25935	25940	100 %	0 %	0 %	0 %	Non-Coding
74	NC_017224	TTA	2	6	25947	25952	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017224	AAGAC	2	10	26718	26727	60 %	0 %	20 %	20 %	Non-Coding
76	NC_017224	GTCTT	2	10	26737	26746	0 %	60 %	20 %	20 %	Non-Coding
77	NC_017224	ATA	2	6	26777	26782	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_017224	AGG	2	6	26788	26793	33.33 %	0 %	66.67 %	0 %	Non-Coding
79	NC_017224	AAT	2	6	27799	27804	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_017224	A	6	6	27833	27838	100 %	0 %	0 %	0 %	Non-Coding
81	NC_017224	TTTA	2	8	27862	27869	25 %	75 %	0 %	0 %	Non-Coding
82	NC_017224	ATT	2	6	27928	27933	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_017224	TCC	2	6	27939	27944	0 %	33.33 %	0 %	66.67 %	Non-Coding
84	NC_017224	AT	4	8	27962	27969	50 %	50 %	0 %	0 %	Non-Coding
85	NC_017224	TAA	2	6	27991	27996	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_017224	GTT	2	6	28007	28012	0 %	66.67 %	33.33 %	0 %	Non-Coding
87	NC_017224	AGC	2	6	28655	28660	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
88	NC_017224	AATA	2	8	28681	28688	75 %	25 %	0 %	0 %	Non-Coding
89	NC_017224	TTA	2	6	28718	28723	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_017224	TTA	2	6	28772	28777	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.