MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc1

Total Repeats: 32

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015852	GCG	2	6	2539	2544	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_015852	ACA	2	6	4536	4541	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_015852	TCT	2	6	5026	5031	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_015852	AAC	2	6	5041	5046	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_015852	CGG	2	6	5100	5105	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_015852	GCCGC	2	10	6895	6904	0 %	0 %	40 %	60 %	Non-Coding
7	NC_015852	GCCA	2	8	6924	6931	25 %	0 %	25 %	50 %	Non-Coding
8	NC_015852	CTT	2	6	6976	6981	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_015852	CTG	2	6	6991	6996	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_015852	CCG	3	9	7023	7031	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_015852	CGC	2	6	7039	7044	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_015852	GCC	3	9	7067	7075	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_015852	ACCC	2	8	7145	7152	25 %	0 %	0 %	75 %	Non-Coding
14	NC_015852	C	6	6	7150	7155	0 %	0 %	0 %	100 %	Non-Coding
15	NC_015852	ATCC	2	8	7245	7252	25 %	25 %	0 %	50 %	Non-Coding
16	NC_015852	ATC	2	6	7266	7271	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_015852	GCC	2	6	7290	7295	0 %	0 %	33.33 %	66.67 %	Non-Coding
18	NC_015852	GGC	2	6	7302	7307	0 %	0 %	66.67 %	33.33 %	Non-Coding
19	NC_015852	GCCTT	2	10	7315	7324	0 %	40 %	20 %	40 %	Non-Coding
20	NC_015852	AC	3	6	7360	7365	50 %	0 %	0 %	50 %	Non-Coding
21	NC_015852	CCCCG	2	10	7366	7375	0 %	0 %	20 %	80 %	Non-Coding
22	NC_015852	A	7	7	7452	7458	100 %	0 %	0 %	0 %	Non-Coding
23	NC_015852	CCAG	2	8	7459	7466	25 %	0 %	25 %	50 %	Non-Coding
24	NC_015852	GGCG	2	8	7486	7493	0 %	0 %	75 %	25 %	Non-Coding
25	NC_015852	TTG	2	6	9209	9214	0 %	66.67 %	33.33 %	0 %	Non-Coding
26	NC_015852	CTG	2	6	9239	9244	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_015852	TAG	2	6	9251	9256	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_015852	GCTTC	2	10	9338	9347	0 %	40 %	20 %	40 %	Non-Coding
29	NC_015852	GCG	2	6	9398	9403	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_015852	CTT	2	6	9409	9414	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_015852	AC	3	6	9425	9430	50 %	0 %	0 %	50 %	Non-Coding
32	NC_015852	CCCCGC	2	12	9431	9442	0 %	0 %	16.67 %	83.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.