Modify Minimum Repeat Number |
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Repeat Summary of Listeria monocytogenes J1816
Minimum Iterations: Mono - (6), Di - (3), Tri - (2), Tetra - (2), Penta - (2), Hexa - (2)
Genome ID | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
NC_021829 | 9041 | 3495 | 42273 | 9010 | 2177 | 1221 | 67217 |
- | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats |
Location | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
Coding | 6548 | 2570 | 35941 | 7353 | 1722 | 1055 | 55189 |
Non-Coding | 2493 | 925 | 6332 | 1657 | 455 | 166 | 12028 |
Click on the numbers to get the respective repeats.
Here, Density refers to the number of microsatellites per every 1 kb sequence (coding/non-coding).