Modify Minimum Repeat Number |
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Repeat Summary of Gardnerella vaginalis HMP9231 chromosome
Minimum Iterations: Mono - (6), Di - (3), Tri - (2), Tetra - (2), Penta - (2), Hexa - (2)
Genome ID | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
NC_017456 | 2352 | 2844 | 24917 | 3973 | 1007 | 768 | 35861 |
- | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats |
Location | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
Coding | 1660 | 2163 | 21490 | 3138 | 765 | 651 | 29867 |
Non-Coding | 692 | 681 | 3427 | 835 | 242 | 117 | 5994 |
Click on the numbers to get the respective repeats.
Here, Density refers to the number of microsatellites per every 1 kb sequence (coding/non-coding).