Modify Minimum Repeat Number |
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Repeat Summary of Escherichia coli APEC O1 chromosome
Minimum Iterations: Mono - (6), Di - (3), Tri - (2), Tetra - (2), Penta - (2), Hexa - (2)
Genome ID | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
NC_008563 | 6097 | 8112 | 72783 | 12352 | 3209 | 1769 | 104322 |
- | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats | Get Repeats |
Location | Mono | Di | Tri | Tetra | Penta | Hexa | Total |
---|---|---|---|---|---|---|---|
Coding | 4451 | 6833 | 64305 | 10564 | 2728 | 1581 | 90462 |
Non-Coding | 1646 | 1279 | 8478 | 1788 | 481 | 188 | 13860 |
Click on the numbers to get the respective repeats.
Here, Density refers to the number of microsatellites per every 1 kb sequence (coding/non-coding).