Chloroplast Motifs - Imperfect TACA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_016736 | TACA | 4 | 31971 | 31986 | 16 | Ricinus communis chloroplast |
2 | NC_014676 | TACA | 3 | 72470 | 72481 | 12 | Theobroma cacao chloroplast |
3 | NC_015308 | TACA | 3 | 71967 | 71978 | 12 | Hevea brasiliensis chloroplast |
4 | NC_015645 | TACA | 3 | 44669 | 44679 | 11 | Schizomeris leibleinii chloroplast |
5 | NC_016668 | TACA | 3 | 71806 | 71817 | 12 | Gossypium raimondii chloroplast |
6 | NC_016728 | TACA | 3 | 56397 | 56408 | 12 | Silene noctiflora chloroplast |
7 | NC_016729 | TACA | 3 | 64291 | 64302 | 12 | Silene conica chloroplast |
8 | NC_016730 | TACA | 3 | 66509 | 66520 | 12 | Silene latifolia chloroplast |
9 | NC_016736 | TACA | 3 | 72899 | 72910 | 12 | Ricinus communis chloroplast |
10 | NC_017006 | TACA | 3 | 98869 | 98880 | 12 | Mankyua chejuensis chloroplast |
11 | NC_017602 | TACA | 3 | 31862 | 31873 | 12 | Elaeis guineensis chloroplast |
12 | NC_017754 | TACA | 3 | 29369 | 29379 | 11 | Eutreptiella gymnastica plastid |
13 | NC_017894 | TACA | 3 | 71866 | 71877 | 12 | Gossypium gossypioides chloroplast |
14 | NC_018111 | TACA | 3 | 71239 | 71250 | 12 | Gossypium capitis-viridis chloroplast |
15 | NC_018113 | TACA | 3 | 71495 | 71506 | 12 | Gossypium robinsonii chloroplast |
16 | NC_020019 | TACA | 3 | 70318 | 70329 | 12 | Camellia sinensis chloroplast |
17 | NC_021109 | TACA | 3 | 124466 | 124477 | 12 | Pleodorina starrii plastid |
18 | NC_021121 | TACA | 3 | 4742 | 4753 | 12 | Ardisia polysticta chloroplast |
19 | NC_021121 | TACA | 3 | 69365 | 69376 | 12 | Ardisia polysticta chloroplast |
20 | NC_021189 | TACA | 3 | 188224 | 188234 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
21 | NC_021936 | TACA | 3 | 30364 | 30375 | 12 | Najas flexilis chloroplast |
22 | NC_000926 | TACA | 3 | 50515 | 50525 | 11 | Guillardia theta chloroplast |
23 | NC_001713 | TACA | 3 | 84719 | 84729 | 11 | Odontella sinensis chloroplast |
24 | NC_002202 | TACA | 3 | 65027 | 65038 | 12 | Spinacia oleracea plastid |
25 | NC_004823 | TACA | 3 | 25552 | 25563 | 12 | Eimeria tenella strain Penn State apicoplast |
26 | NC_006137 | TACA | 3 | 14134 | 14144 | 11 | Gracilaria tenuistipitata var. liui chloroplast |
27 | NC_006137 | TACA | 3 | 128585 | 128596 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
28 | NC_006861 | TACA | 3 | 45369 | 45379 | 11 | Huperzia lucidula chloroplast |
29 | NC_007288 | TACA | 3 | 65028 | 65039 | 12 | Emiliania huxleyi chloroplast |
30 | NC_007407 | TACA | 3 | 14528 | 14539 | 12 | Acorus calamus plastid |
31 | NC_008235 | TACA | 3 | 67150 | 67161 | 12 | Populus alba chloroplast |
32 | NC_008235 | TACA | 3 | 67999 | 68010 | 12 | Populus alba chloroplast |
33 | NC_008335 | TACA | 3 | 11480 | 11492 | 13 | Platanus occidentalis chloroplast |
34 | NC_008372 | TACA | 3 | 223339 | 223349 | 11 | Stigeoclonium helveticum chloroplast |
35 | NC_008454 | TACA | 3 | 129711 | 129721 | 11 | Pelargonium x hortorum chloroplast |
36 | NC_009143 | TACA | 3 | 67596 | 67607 | 12 | Populus trichocarpa chloroplast |
37 | NC_009143 | TACA | 3 | 68444 | 68455 | 12 | Populus trichocarpa chloroplast |
38 | NC_009765 | TACA | 3 | 1450 | 1460 | 11 | Cuscuta gronovii chloroplast |
39 | NC_009962 | TACA | 3 | 27874 | 27885 | 12 | Ceratophyllum demersum chloroplast |
40 | NC_010093 | TACA | 3 | 14204 | 14215 | 12 | Acorus americanus chloroplast |
41 | NC_010323 | TACA | 3 | 72015 | 72026 | 12 | Carica papaya chloroplast |
42 | NC_010433 | TACA | 3 | 72123 | 72134 | 12 | Manihot esculenta chloroplast |
43 | NC_010776 | TACA | 3 | 113935 | 113945 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
44 | NC_011031 | TACA | 3 | 67205 | 67216 | 12 | Oedogonium cardiacum chloroplast |
45 | NC_011031 | TACA | 3 | 89702 | 89713 | 12 | Oedogonium cardiacum chloroplast |
46 | NC_011031 | TACA | 3 | 105808 | 105819 | 12 | Oedogonium cardiacum chloroplast |
47 | NC_011031 | TACA | 3 | 111364 | 111374 | 11 | Oedogonium cardiacum chloroplast |
48 | NC_011031 | TACA | 3 | 111801 | 111812 | 12 | Oedogonium cardiacum chloroplast |
49 | NC_011031 | TACA | 3 | 112041 | 112052 | 12 | Oedogonium cardiacum chloroplast |
50 | NC_011031 | TACA | 3 | 114825 | 114836 | 12 | Oedogonium cardiacum chloroplast |
51 | NC_011031 | TACA | 3 | 142644 | 142655 | 12 | Oedogonium cardiacum chloroplast |
52 | NC_013823 | TACA | 3 | 34317 | 34328 | 12 | Typha latifolia chloroplast |
53 | NC_013823 | TACA | 3 | 50704 | 50715 | 12 | Typha latifolia chloroplast |