Chloroplast Motifs - Imperfect CTTTT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014570 | CTTTT | 5 | 64887 | 64912 | 26 | Eucalyptus grandis chloroplast |
2 | NC_014346 | CTTTT | 4 | 519574 | 519593 | 20 | Floydiella terrestris chloroplast |
3 | NC_017602 | CTTTT | 4 | 129842 | 129860 | 19 | Elaeis guineensis chloroplast |
4 | NC_020363 | CTTTT | 4 | 127978 | 127997 | 20 | Zingiber spectabile plastid |
5 | NC_020364 | CTTTT | 4 | 130516 | 130534 | 19 | Pseudophoenix vinifera plastid |
6 | NC_020365 | CTTTT | 4 | 130135 | 130153 | 19 | Calamus caryotoides plastid |
7 | NC_021438 | CTTTT | 4 | 55496 | 55516 | 21 | Gnetum montanum chloroplast |
8 | NC_006137 | CTTTT | 4 | 89085 | 89103 | 19 | Gracilaria tenuistipitata var. liui chloroplast |
9 | NC_010358 | CTTTT | 4 | 129580 | 129598 | 19 | Oenothera argillicola chloroplast |
10 | NC_010360 | CTTTT | 4 | 130124 | 130142 | 19 | Oenothera glazioviana chloroplast |
11 | NC_010654 | CTTTT | 4 | 57505 | 57525 | 21 | Welwitschia mirabilis chloroplast |
12 | NC_013991 | CTTTT | 4 | 131126 | 131144 | 19 | Phoenix dactylifera chloroplast |
13 | NC_011087 | CTTTT | 3 | 1014831 | 1014844 | 14 | Paulinella chromatophora chromatophore |
14 | NC_014346 | CTTTT | 3 | 15070 | 15084 | 15 | Floydiella terrestris chloroplast |
15 | NC_014346 | CTTTT | 3 | 20702 | 20715 | 14 | Floydiella terrestris chloroplast |
16 | NC_014346 | CTTTT | 3 | 27408 | 27423 | 16 | Floydiella terrestris chloroplast |
17 | NC_014346 | CTTTT | 3 | 77306 | 77320 | 15 | Floydiella terrestris chloroplast |
18 | NC_014346 | CTTTT | 3 | 98326 | 98340 | 15 | Floydiella terrestris chloroplast |
19 | NC_014346 | CTTTT | 3 | 142682 | 142696 | 15 | Floydiella terrestris chloroplast |
20 | NC_014346 | CTTTT | 3 | 168384 | 168397 | 14 | Floydiella terrestris chloroplast |
21 | NC_014346 | CTTTT | 3 | 234837 | 234850 | 14 | Floydiella terrestris chloroplast |
22 | NC_014346 | CTTTT | 3 | 283751 | 283765 | 15 | Floydiella terrestris chloroplast |
23 | NC_014346 | CTTTT | 3 | 348233 | 348246 | 14 | Floydiella terrestris chloroplast |
24 | NC_014346 | CTTTT | 3 | 415290 | 415304 | 15 | Floydiella terrestris chloroplast |
25 | NC_014346 | CTTTT | 3 | 423286 | 423299 | 14 | Floydiella terrestris chloroplast |
26 | NC_014346 | CTTTT | 3 | 490216 | 490229 | 14 | Floydiella terrestris chloroplast |
27 | NC_014346 | CTTTT | 3 | 496529 | 496543 | 15 | Floydiella terrestris chloroplast |
28 | NC_014570 | CTTTT | 3 | 52395 | 52409 | 15 | Eucalyptus grandis chloroplast |
29 | NC_015113 | CTTTT | 3 | 62288 | 62302 | 15 | Anthriscus cerefolium chloroplast |
30 | NC_015206 | CTTTT | 3 | 128371 | 128385 | 15 | Fragaria vesca subsp. vesca chloroplast |
31 | NC_015359 | CTTTT | 3 | 7099 | 7113 | 15 | Chlorella variabilis plastid |
32 | NC_015543 | CTTTT | 3 | 82143 | 82156 | 14 | Jacobaea vulgaris chloroplast |
33 | NC_015892 | CTTTT | 3 | 112332 | 112346 | 15 | Magnolia kwangsiensis chloroplast |
34 | NC_015990 | CTTTT | 3 | 48910 | 48923 | 14 | Panicum virgatum chloroplast |
35 | NC_016708 | CTTTT | 3 | 124740 | 124754 | 15 | Millettia pinnata chloroplast |
36 | NC_016753 | CTTTT | 3 | 66699 | 66713 | 15 | Colocasia esculenta chloroplast |
37 | NC_016921 | CTTTT | 3 | 63019 | 63033 | 15 | Pentactina rupicola chloroplast |
38 | NC_017609 | CTTTT | 3 | 120340 | 120354 | 15 | Phalaenopsis equestris chloroplast |
39 | NC_018114 | CTTTT | 3 | 116388 | 116402 | 15 | Erycina pusilla chloroplast |
40 | NC_018357 | CTTTT | 3 | 15310 | 15324 | 15 | Magnolia denudata chloroplast |
41 | NC_018357 | CTTTT | 3 | 112489 | 112502 | 14 | Magnolia denudata chloroplast |
42 | NC_018565 | CTTTT | 3 | 51791 | 51804 | 14 | Pachycladon enysii chloroplast |
43 | NC_018766 | CTTTT | 3 | 128424 | 128438 | 15 | Fragaria vesca subsp. bracteata chloroplast |
44 | NC_018767 | CTTTT | 3 | 128441 | 128455 | 15 | Fragaria mandshurica plastid |
45 | NC_019601 | CTTTT | 3 | 128294 | 128308 | 15 | Fragaria chiloensis chloroplast |
46 | NC_019602 | CTTTT | 3 | 128312 | 128326 | 15 | Fragaria virginiana chloroplast |
47 | NC_020362 | CTTTT | 3 | 130627 | 130640 | 14 | Heliconia collinsiana plastid |
48 | NC_020367 | CTTTT | 3 | 16974 | 16987 | 14 | Dasypogon bromeliifolius plastid |
49 | NC_020438 | CTTTT | 3 | 12552 | 12566 | 15 | Gonium pectorale chloroplast |
50 | NC_021101 | CTTTT | 3 | 51440 | 51453 | 14 | Francoa sonchifolia plastid |
51 | NC_021102 | CTTTT | 3 | 51529 | 51542 | 14 | Pachycladon cheesemanii chloroplast |
52 | NC_021110 | CTTTT | 3 | 92831 | 92844 | 14 | Cephalotaxus oliveri chloroplast |
53 | NC_021425 | CTTTT | 3 | 129233 | 129246 | 14 | Tetracentron sinense chloroplast |
54 | NC_021437 | CTTTT | 3 | 21741 | 21755 | 15 | Cunninghamia lanceolata chloroplast |
55 | NC_021437 | CTTTT | 3 | 134210 | 134224 | 15 | Cunninghamia lanceolata chloroplast |
56 | NC_021438 | CTTTT | 3 | 8971 | 8985 | 15 | Gnetum montanum chloroplast |
57 | NC_021455 | CTTTT | 3 | 62768 | 62782 | 15 | Prinsepia utilis plastid |
58 | NC_021636 | CTTTT | 3 | 39103 | 39117 | 15 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
59 | NC_021636 | CTTTT | 3 | 79842 | 79857 | 16 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
60 | NC_021645 | CTTTT | 3 | 38893 | 38906 | 14 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
61 | NC_021645 | CTTTT | 3 | 79634 | 79649 | 16 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
62 | NC_021646 | CTTTT | 3 | 79978 | 79993 | 16 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
63 | NC_021647 | CTTTT | 3 | 39093 | 39107 | 15 | Glycine canescens voucher CSIRO:G1232 chloroplast |
64 | NC_021647 | CTTTT | 3 | 79651 | 79666 | 16 | Glycine canescens voucher CSIRO:G1232 chloroplast |
65 | NC_021648 | CTTTT | 3 | 79877 | 79892 | 16 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
66 | NC_021649 | CTTTT | 3 | 80076 | 80091 | 16 | Glycine falcata voucher CSIRO:G1718 chloroplast |
67 | NC_021650 | CTTTT | 3 | 39134 | 39148 | 15 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
68 | NC_021650 | CTTTT | 3 | 79899 | 79914 | 16 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
69 | NC_021760 | CTTTT | 3 | 47446 | 47459 | 14 | Triticum monococcum chloroplast |
70 | NC_022136 | CTTTT | 3 | 29745 | 29758 | 14 | Lygodium japonicum chloroplast |
71 | NC_001319 | CTTTT | 3 | 77435 | 77449 | 15 | Marchantia polymorpha chloroplast |
72 | NC_001675 | CTTTT | 3 | 120199 | 120213 | 15 | Cyanophora paradoxa cyanelle |
73 | NC_001865 | CTTTT | 3 | 16348 | 16362 | 15 | Chlorella vulgaris chloroplast |
74 | NC_001865 | CTTTT | 3 | 48923 | 48936 | 14 | Chlorella vulgaris chloroplast |
75 | NC_001865 | CTTTT | 3 | 130749 | 130762 | 14 | Chlorella vulgaris chloroplast |
76 | NC_001865 | CTTTT | 3 | 149879 | 149892 | 14 | Chlorella vulgaris chloroplast |
77 | NC_002186 | CTTTT | 3 | 17852 | 17865 | 14 | Mesostigma viride chloroplast |
78 | NC_005086 | CTTTT | 3 | 53204 | 53218 | 15 | Amborella trichopoda chloroplast |
79 | NC_005087 | CTTTT | 3 | 44699 | 44713 | 15 | Physcomitrella patens subsp. patens chloroplast |
80 | NC_005087 | CTTTT | 3 | 108508 | 108522 | 15 | Physcomitrella patens subsp. patens chloroplast |
81 | NC_007499 | CTTTT | 3 | 120425 | 120439 | 15 | Phalaenopsis aphrodite subsp. formosana chloroplast |
82 | NC_008099 | CTTTT | 3 | 5391 | 5404 | 14 | Oltmannsiellopsis viridis chloroplast |
83 | NC_008101 | CTTTT | 3 | 83991 | 84005 | 15 | Scenedesmus obliquus chloroplast |
84 | NC_008101 | CTTTT | 3 | 137003 | 137017 | 15 | Scenedesmus obliquus chloroplast |
85 | NC_008101 | CTTTT | 3 | 156328 | 156343 | 16 | Scenedesmus obliquus chloroplast |
86 | NC_008326 | CTTTT | 3 | 112501 | 112514 | 14 | Liriodendron tulipifera chloroplast |
87 | NC_008334 | CTTTT | 3 | 32100 | 32115 | 16 | Citrus sinensis chloroplast |
88 | NC_008372 | CTTTT | 3 | 29339 | 29352 | 14 | Stigeoclonium helveticum chloroplast |
89 | NC_008372 | CTTTT | 3 | 32360 | 32373 | 14 | Stigeoclonium helveticum chloroplast |
90 | NC_008372 | CTTTT | 3 | 85918 | 85932 | 15 | Stigeoclonium helveticum chloroplast |
91 | NC_008372 | CTTTT | 3 | 90725 | 90738 | 14 | Stigeoclonium helveticum chloroplast |
92 | NC_008372 | CTTTT | 3 | 120760 | 120774 | 15 | Stigeoclonium helveticum chloroplast |
93 | NC_008372 | CTTTT | 3 | 124390 | 124403 | 14 | Stigeoclonium helveticum chloroplast |
94 | NC_008407 | CTTTT | 3 | 369 | 382 | 14 | Jasminum nudiflorum chloroplast |
95 | NC_008454 | CTTTT | 3 | 8061 | 8074 | 14 | Pelargonium x hortorum chloroplast |
96 | NC_008454 | CTTTT | 3 | 112446 | 112461 | 16 | Pelargonium x hortorum chloroplast |
97 | NC_008454 | CTTTT | 3 | 176583 | 176598 | 16 | Pelargonium x hortorum chloroplast |
98 | NC_009259 | CTTTT | 3 | 54155 | 54168 | 14 | Phaseolus vulgaris chloroplast |
99 | NC_009259 | CTTTT | 3 | 123581 | 123594 | 14 | Phaseolus vulgaris chloroplast |
100 | NC_009268 | CTTTT | 3 | 13003 | 13017 | 15 | Arabis hirsuta chloroplast |
101 | NC_009268 | CTTTT | 3 | 111683 | 111696 | 14 | Arabis hirsuta chloroplast |
102 | NC_009269 | CTTTT | 3 | 46266 | 46280 | 15 | Barbarea verna chloroplast |
103 | NC_009269 | CTTTT | 3 | 52213 | 52226 | 14 | Barbarea verna chloroplast |
104 | NC_009271 | CTTTT | 3 | 46239 | 46253 | 15 | Crucihimalaya wallichii chloroplast |
105 | NC_009271 | CTTTT | 3 | 51905 | 51918 | 14 | Crucihimalaya wallichii chloroplast |
106 | NC_009273 | CTTTT | 3 | 46278 | 46291 | 14 | Lepidium virginicum chloroplast |
107 | NC_009274 | CTTTT | 3 | 6871 | 6885 | 15 | Lobularia maritima chloroplast |
108 | NC_009275 | CTTTT | 3 | 52102 | 52115 | 14 | Nasturtium officinale chloroplast |
109 | NC_009599 | CTTTT | 3 | 130749 | 130762 | 14 | Buxus microphylla chloroplast |
110 | NC_010548 | CTTTT | 3 | 61982 | 61996 | 15 | Cryptomeria japonica chloroplast |
111 | NC_010654 | CTTTT | 3 | 68272 | 68287 | 16 | Welwitschia mirabilis chloroplast |
112 | NC_011031 | CTTTT | 3 | 141141 | 141155 | 15 | Oedogonium cardiacum chloroplast |
113 | NC_011930 | CTTTT | 3 | 101477 | 101491 | 15 | Keteleeria davidiana chloroplast |
114 | NC_011942 | CTTTT | 3 | 107228 | 107242 | 15 | Gnetum parvifolium chloroplast |
115 | NC_012052 | CTTTT | 3 | 45363 | 45377 | 15 | Syntrichia ruralis chloroplast |
116 | NC_012052 | CTTTT | 3 | 112330 | 112343 | 14 | Syntrichia ruralis chloroplast |
117 | NC_012224 | CTTTT | 3 | 7672 | 7686 | 15 | Jatropha curcas chloroplast |