ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ATTA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_010323ATTA9498034983735 Carica papaya chloroplast
2NC_011087ATTA729004529007329Paulinella chromatophora chromatophore
3NC_019651ATTA610461610463924Lolium multiflorum plastid
4NC_021430ATTA6675566757823Cymbidium sinense voucher KUN:YJB100605 chloroplast
5NC_009950ATTA610468810471124 Lolium perenne chloroplast
6NC_011087ATTA519327019329324Paulinella chromatophora chromatophore
7NC_014674ATTA5726767269419Castanea mollissima chloroplast
8NC_015645ATTA516014816016821Schizomeris leibleinii chloroplast
9NC_020152ATTA5726637268119Quercus rubra plastid
10NC_001675ATTA5903649038320 Cyanophora paradoxa cyanelle
11NC_004115ATTA512873412875421 Chaetosphaeridium globosum chloroplast
12NC_009272ATTA5759837600321 Draba nemorosa chloroplast
13NC_014267ATTA4191001911415Kryptoperidinium foliaceum chloroplast
14NC_014570ATTA4341253414016Eucalyptus grandis chloroplast
15NC_014570ATTA4456634567715Eucalyptus grandis chloroplast
16NC_014808ATTA4627606277516Thalassiosira oceanica CCMP1005 chloroplast
17NC_015113ATTA411982911984315Anthriscus cerefolium chloroplast
18NC_015605ATTA41696171015Nelumbo lutea chloroplast
19NC_015894ATTA4518515186515Wolffiella lingulata chloroplast
20NC_016065ATTA4699716998616Taiwania cryptomerioides chloroplast DNA
21NC_016727ATTA4153701538516Silene vulgaris chloroplast
22NC_016753ATTA4504485046417Colocasia esculenta chloroplast
23NC_017609ATTA4685186853215Phalaenopsis equestris chloroplast
24NC_019648ATTA410464310465816Festuca altissima plastid
25NC_020361ATTA410333310334816Podocarpus totara chloroplast
26NC_020361ATTA413087613089015Podocarpus totara chloroplast
27NC_020363ATTA4526385265215Zingiber spectabile plastid
28NC_020460ATTA4604066042116Euglena viridis culture-collection ATCC:PRA110 chloroplast
29NC_021423ATTA4302363025116Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
30NC_021432ATTA4676696768315Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
31NC_021433ATTA4679076792115Cymbidium mannii voucher KUN:YJB100602 chloroplast
32NC_021441ATTA4692266924116Taiwania flousiana chloroplast
33NC_022099ATTA42668268316Medicago truncatula cultivar Jemalong 2HA plastid
34NC_022100ATTA42668268316Medicago truncatula cultivar Borung plastid
35NC_001319ATTA4366853670016 Marchantia polymorpha chloroplast
36NC_001319ATTA4539375395216 Marchantia polymorpha chloroplast
37NC_002186ATTA4165811659616 Mesostigma viride chloroplast
38NC_002186ATTA4709277094216 Mesostigma viride chloroplast
39NC_003119ATTA42668268316 Medicago truncatula chloroplast
40NC_006861ATTA4569535696917 Huperzia lucidula chloroplast
41NC_007499ATTA4684676848115 Phalaenopsis aphrodite subsp. formosana chloroplast
42NC_008115ATTA4342223423716 Eucalyptus globulus subsp. globulus chloroplast
43NC_008116ATTA4967249673916 Staurastrum punctulatum chloroplast
44NC_008235ATTA47124713916 Populus alba chloroplast
45NC_008326ATTA411727611729116 Liriodendron tulipifera chloroplast
46NC_008335ATTA4162051622016 Platanus occidentalis chloroplast
47NC_008408ATTA4676606767819 Bigelowiella natans plastid
48NC_008588ATTA4365063652116 Phaeodactylum tricornutum chloroplast
49NC_009143ATTA47182719716 Populus trichocarpa chloroplast
50NC_009143ATTA47200721516 Populus trichocarpa chloroplast
51NC_010323ATTA4548885490316 Carica papaya chloroplast
52NC_010772ATTA4453294534416 Heterosigma akashiwo chloroplast
53NC_013498ATTA410078310079816 Ectocarpus siliculosus chloroplast
54NC_014056ATTA4652896530315 Oncidium Gower Ramsey chloroplast
55NC_014063ATTA4262962631116 Lathyrus sativus chloroplast
56NC_011087ATTA3194201943112Paulinella chromatophora chromatophore
57NC_011087ATTA3244992451012Paulinella chromatophora chromatophore
58NC_011087ATTA3578405785112Paulinella chromatophora chromatophore
59NC_011087ATTA323543323544412Paulinella chromatophora chromatophore
60NC_011087ATTA329241229242312Paulinella chromatophora chromatophore
61NC_011087ATTA390798590799612Paulinella chromatophora chromatophore
62NC_011087ATTA394914294915312Paulinella chromatophora chromatophore
63NC_014287ATTA3551675517812Durinskia baltica chloroplast
64NC_014348ATTA315140715141913Pteridium aquilinum subsp. aquilinum chloroplast
65NC_014674ATTA312712412713411Castanea mollissima chloroplast
66NC_014675ATTA311022011023112Isoetes flaccida chloroplast
67NC_014697ATTA34482449312Prunus persica chloroplast
68NC_014697ATTA3138081382013Prunus persica chloroplast
69NC_014699ATTA38068807811Equisetum arvense chloroplast
70NC_014808ATTA3157761578712Thalassiosira oceanica CCMP1005 chloroplast
71NC_014808ATTA312186212187312Thalassiosira oceanica CCMP1005 chloroplast
72NC_015113ATTA3316813169111Anthriscus cerefolium chloroplast
73NC_015206ATTA3581965820813Fragaria vesca subsp. vesca chloroplast
74NC_015402ATTA3652536526412Ptilidium pulcherrimum chloroplast
75NC_015403ATTA3560775608711Fistulifera sp. JPCC DA0580 chloroplast
76NC_015645ATTA312079412080512Schizomeris leibleinii chloroplast
77NC_015645ATTA314093014094011Schizomeris leibleinii chloroplast
78NC_015645ATTA316698116699111Schizomeris leibleinii chloroplast
79NC_015891ATTA3738367384712Spirodela polyrhiza chloroplast
80NC_015891ATTA3899198993012Spirodela polyrhiza chloroplast
81NC_015894ATTA3745347454512Wolffiella lingulata chloroplast
82NC_015996ATTA312557812558912Pyrus pyrifolia chloroplast
83NC_016063ATTA3765007651112Cephalotaxus wilsoniana chloroplast DNA
84NC_016063ATTA3824868249813Cephalotaxus wilsoniana chloroplast DNA
85NC_016065ATTA33934394411Taiwania cryptomerioides chloroplast DNA
86NC_016668ATTA311821111822212Gossypium raimondii chloroplast
87NC_016670ATTA311839111840212Gossypium darwinii chloroplast
88NC_016690ATTA311843511844612Gossypium tomentosum chloroplast
89NC_016692ATTA311830411831512Gossypium herbaceum subsp. africanum chloroplast
90NC_016703ATTA331412Phaeocystis antarctica strain CCMP1374 plastid
91NC_016703ATTA3374913750111Phaeocystis antarctica strain CCMP1374 plastid
92NC_016703ATTA3595655957511Phaeocystis antarctica strain CCMP1374 plastid
93NC_016703ATTA3664056641511Phaeocystis antarctica strain CCMP1374 plastid
94NC_016703ATTA3980829809312Phaeocystis antarctica strain CCMP1374 plastid
95NC_016711ATTA311831811832912Gossypium mustelinum chloroplast
96NC_016712ATTA311823311824412Gossypium arboreum chloroplast
97NC_016729ATTA3386923870413Silene conica chloroplast
98NC_016731ATTA3226642267411Synedra acus chloroplast
99NC_016735ATTA3209932100513Fucus vesiculosus chloroplast
100NC_016736ATTA3332853329612Ricinus communis chloroplast
101NC_016753ATTA3726147262512Colocasia esculenta chloroplast
102NC_016753ATTA311497311498311Colocasia esculenta chloroplast
103NC_016753ATTA312580312581412Colocasia esculenta chloroplast
104NC_016921ATTA34521453212Pentactina rupicola chloroplast
105NC_017894ATTA311828511829612Gossypium gossypioides chloroplast
106NC_017928ATTA32782279312Plasmodium falciparum HB3 apicoplast
107NC_018109ATTA311733711734812Gossypium incanum chloroplast
108NC_018110ATTA311761811762912Gossypium somalense chloroplast
109NC_018111ATTA311756711757812Gossypium capitis-viridis chloroplast
110NC_018112ATTA311765011766112Gossypium areysianum chloroplast
111NC_018113ATTA311797211798312Gossypium robinsonii chloroplast
112NC_018114ATTA38508851912Erycina pusilla chloroplast
113NC_018114ATTA3667926680312Erycina pusilla chloroplast
114NC_018523ATTA3113711138212Saccharina japonica chloroplast
115NC_018523ATTA310063410064512Saccharina japonica chloroplast
116NC_018541ATTA3603036031513Elodea canadensis chloroplast
117NC_018565ATTA3650576506812Pachycladon enysii chloroplast
118NC_018766ATTA3582295824113Fragaria vesca subsp. bracteata chloroplast
119NC_018767ATTA3582205823213Fragaria mandshurica plastid
120NC_019601ATTA3581575816913Fragaria chiloensis chloroplast
121NC_019602ATTA3581905820213Fragaria virginiana chloroplast
122NC_019616ATTA311757411758411Vaccinium macrocarpon plastid
123NC_019650ATTA310472210473312Festuca pratensis plastid
124NC_020014ATTA3316383164912Nannochloropsis gaditana chloroplast
125NC_020152ATTA312747012748011Quercus rubra plastid
126NC_020361ATTA37009702012Podocarpus totara chloroplast
127NC_020363ATTA3795677957812Zingiber spectabile plastid
128NC_020438ATTA317133217134211Gonium pectorale chloroplast
129NC_020460ATTA3188441885916Euglena viridis culture-collection ATCC:PRA110 chloroplast
130NC_020460ATTA3324783248811Euglena viridis culture-collection ATCC:PRA110 chloroplast
131NC_020460ATTA3452354524612Euglena viridis culture-collection ATCC:PRA110 chloroplast
132NC_020460ATTA3739537396412Euglena viridis culture-collection ATCC:PRA110 chloroplast
133NC_020795ATTA3123411235212Chondrus crispus plastid complete genome
134NC_020795ATTA3670236703513Chondrus crispus plastid complete genome
135NC_020795ATTA311604111605212Chondrus crispus plastid complete genome
136NC_021075ATTA3115371154913Calliarthron tuberculosum chloroplast
137NC_021075ATTA3672006721011Calliarthron tuberculosum chloroplast
138NC_021075ATTA317599417600512Calliarthron tuberculosum chloroplast
139NC_021091ATTA3191471915913Vigna angularis chloroplast DNA
140NC_021110ATTA3759777598812Cephalotaxus oliveri chloroplast
141NC_021189ATTA3600616007212Pyropia haitanensis voucher PH-38 chloroplast
142NC_021189ATTA317577117578111Pyropia haitanensis voucher PH-38 chloroplast
143NC_021423ATTA3326353264612Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
144NC_021437ATTA3560385604912Cunninghamia lanceolata chloroplast
145NC_021437ATTA310596610597712Cunninghamia lanceolata chloroplast
146NC_021441ATTA33934394411Taiwania flousiana chloroplast
147NC_021441ATTA3829568296712Taiwania flousiana chloroplast
148NC_021455ATTA35581559212Prinsepia utilis plastid
149NC_021618ATTA37330734213Grateloupia taiwanensis plastid
150NC_021618ATTA310807510808713Grateloupia taiwanensis plastid
151NC_021636ATTA3246942470411Glycine tomentella voucher CSIRO:G1403 chloroplast
152NC_021637ATTA3385173852812Phaeocystis globosa strain Pg-G(A) chloroplast
153NC_021637ATTA3608436085311Phaeocystis globosa strain Pg-G(A) chloroplast
154NC_021637ATTA3685696857911Phaeocystis globosa strain Pg-G(A) chloroplast
155NC_021637ATTA310061310062412Phaeocystis globosa strain Pg-G(A) chloroplast
156NC_021645ATTA3245742458411Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
157NC_021647ATTA3247042471411Glycine canescens voucher CSIRO:G1232 chloroplast
158NC_021648ATTA3247062471611Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
159NC_021649ATTA3247032471311Glycine falcata voucher CSIRO:G1718 chloroplast
160NC_021650ATTA3247032471311Glycine syndetika voucher CSIRO:G1300 chloroplast
161NC_022099ATTA3452734528513Medicago truncatula cultivar Jemalong 2HA plastid
162NC_022100ATTA3453294534113Medicago truncatula cultivar Borung plastid
163NC_022136ATTA33853386311Lygodium japonicum chloroplast
164NC_000925ATTA317271717272711 Porphyra purpurea chloroplast
165NC_001319ATTA3368693688012 Marchantia polymorpha chloroplast
166NC_001603ATTA3622116222212 Euglena gracilis chloroplast
167NC_001603ATTA3797627977312 Euglena gracilis chloroplast
168NC_001603ATTA3960459605612 Euglena gracilis chloroplast
169NC_001675ATTA3389183892912 Cyanophora paradoxa cyanelle
170NC_001675ATTA3522855229511 Cyanophora paradoxa cyanelle
171NC_002186ATTA3639046391512 Mesostigma viride chloroplast
172NC_002652ATTA3182871829711 Euglena longa plastid
173NC_002693ATTA3718877189812 Oenothera elata subsp. hookeri plastid plastome I
174NC_003119ATTA3452734528513 Medicago truncatula chloroplast
175NC_004543ATTA310979010980011 Anthoceros formosae chloroplast
176NC_004766ATTA3125101252213 Adiantum capillus-veneris chloroplast
177NC_004799ATTA3310463105712 Cyanidioschyzon merolae strain 10D chloroplast
178NC_005087ATTA3334653347612 Physcomitrella patens subsp. patens chloroplast
179NC_005353ATTA3616336164311 Chlamydomonas reinhardtii chloroplast
180NC_005353ATTA320126120127212 Chlamydomonas reinhardtii chloroplast
181NC_005353ATTA320128720129812 Chlamydomonas reinhardtii chloroplast
182NC_005353ATTA320131320132412 Chlamydomonas reinhardtii chloroplast
183NC_006050ATTA3174681747912 Nymphaea alba chloroplast
184NC_006137ATTA3122181222811 Gracilaria tenuistipitata var. liui chloroplast
185NC_006137ATTA3281632817412 Gracilaria tenuistipitata var. liui chloroplast
186NC_006137ATTA3319503196112 Gracilaria tenuistipitata var. liui chloroplast
187NC_006137ATTA3448644487512 Gracilaria tenuistipitata var. liui chloroplast
188NC_006137ATTA3738957390511 Gracilaria tenuistipitata var. liui chloroplast
189NC_006137ATTA311703211704312 Gracilaria tenuistipitata var. liui chloroplast
190NC_006137ATTA317400517401511 Gracilaria tenuistipitata var. liui chloroplast
191NC_006861ATTA3715677157812 Huperzia lucidula chloroplast
192NC_007944ATTA311830711831812 Gossypium hirsutum chloroplast
193NC_007957ATTA37955796511 Vitis vinifera chloroplast
194NC_007957ATTA3620176202711 Vitis vinifera chloroplast
195NC_007977ATTA3106201063011 Helianthus annuus chloroplast
196NC_008097ATTA31861187111 Chara vulgaris chloroplast
197NC_008097ATTA3804558046612 Chara vulgaris chloroplast
198NC_008097ATTA310656410657411 Chara vulgaris chloroplast
199NC_008097ATTA312631412632411 Chara vulgaris chloroplast
200NC_008097ATTA315326715327913 Chara vulgaris chloroplast
201NC_008097ATTA316478216479413 Chara vulgaris chloroplast
202NC_008097ATTA316594916595911 Chara vulgaris chloroplast
203NC_008100ATTA35064507512 Helicosporidium sp. ex Simulium jonesii plastid
204NC_008114ATTA3488544886512 Pseudendoclonium akinetum chloroplast
205NC_008114ATTA318899618900813 Pseudendoclonium akinetum chloroplast
206NC_008114ATTA318901718902812 Pseudendoclonium akinetum chloroplast
207NC_008117ATTA3299622997312 Zygnema circumcarinatum chloroplast
208NC_008117ATTA311224711225812 Zygnema circumcarinatum chloroplast
209NC_008117ATTA312579112580111 Zygnema circumcarinatum chloroplast
210NC_008325ATTA3717187172912 Daucus carota chloroplast
211NC_008359ATTA311606611607712 Morus indica chloroplast
212NC_008372ATTA3484994850911 Stigeoclonium helveticum chloroplast
213NC_008372ATTA3693466935712 Stigeoclonium helveticum chloroplast
214NC_008408ATTA33836384712 Bigelowiella natans plastid
215NC_008456ATTA3870128702211 Drimys granadensis chloroplast
216NC_008457ATTA3530285303912 Piper cenocladum chloroplast
217NC_008589ATTA35925593612 Thalassiosira pseudonana chloroplast
218NC_008591ATTA310620210621312 Agrostis stolonifera chloroplast
219NC_008796ATTA3422704228011 Ranunculus macranthus chloroplast
220NC_008796ATTA3470464705611 Ranunculus macranthus chloroplast
221NC_008796ATTA3636036361311 Ranunculus macranthus chloroplast
222NC_008796ATTA3801768018712 Ranunculus macranthus chloroplast
223NC_009270ATTA3773387734912 Capsella bursa-pastoris chloroplast
224NC_009598ATTA3536695368012 Chloranthus spicatus chloroplast
225NC_009600ATTA3385083851912 Illicium oligandrum chloroplast
226NC_009681ATTA39169918012 Leptosira terrestris chloroplast
227NC_009681ATTA3528005281112 Leptosira terrestris chloroplast
228NC_009949ATTA3321533216311 Cuscuta obtusiflora chloroplast
229NC_010109ATTA3724057241612 Lemna minor chloroplast
230NC_010358ATTA3709037091412 Oenothera argillicola chloroplast
231NC_010360ATTA3718927190312 Oenothera glazioviana chloroplast
232NC_010361ATTA3714077141812 Oenothera biennis chloroplast
233NC_010362ATTA3702567026712 Oenothera parviflora chloroplast
234NC_010442ATTA311888911890113 Trachelium caeruleum chloroplast
235NC_010548ATTA3884108842112 Cryptomeria japonica chloroplast
236NC_010654ATTA3659716598313 Welwitschia mirabilis chloroplast
237NC_010772ATTA3207062071712 Heterosigma akashiwo chloroplast
238NC_010772ATTA3341083411912 Heterosigma akashiwo chloroplast
239NC_010772ATTA3538195382911 Heterosigma akashiwo chloroplast
240NC_010772ATTA314712814713811 Heterosigma akashiwo chloroplast
241NC_011031ATTA3126001261213 Oedogonium cardiacum chloroplast
242NC_011031ATTA3323523236413 Oedogonium cardiacum chloroplast
243NC_011163ATTA3468784688912 Cicer arietinum chloroplast
244NC_011600ATTA3115981160912 Vaucheria litorea chloroplast
245NC_011600ATTA3244682448013 Vaucheria litorea chloroplast
246NC_011600ATTA3445634457412 Vaucheria litorea chloroplast
247NC_011600ATTA3845308454112 Vaucheria litorea chloroplast
248NC_012052ATTA3145811459212 Syntrichia ruralis chloroplast
249NC_012099ATTA3444344444512 Pyramimonas parkeae chloroplast
250NC_012615ATTA3881378814812 Megaleranthis saniculifolia chloroplast
251NC_012818ATTA3643466435712 Alsophila spinulosa chloroplast
252NC_012818ATTA315580515581713 Alsophila spinulosa chloroplast
253NC_012903ATTA3823468235611 Aureoumbra lagunensis chloroplast
254NC_012978ATTA3993019931212 Parachlorella kessleri chloroplast
255NC_013359ATTA3953619537212 Bryopsis hypnoides chloroplast
256NC_013359ATTA310432810433811 Bryopsis hypnoides chloroplast
257NC_013498ATTA3252332524412 Ectocarpus siliculosus chloroplast
258NC_013498ATTA3356153562612 Ectocarpus siliculosus chloroplast
259NC_013498ATTA313318313319513 Ectocarpus siliculosus chloroplast
260NC_013703ATTA3248242483411 Cryptomonas paramecium plastid