ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect ATA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_020438ATA1815594215599554Gonium pectorale chloroplast
2NC_005353ATA15359063595045 Chlamydomonas reinhardtii chloroplast
3NC_021109ATA1311584511588339Pleodorina starrii plastid
4NC_016727ATA77377739721Silene vulgaris chloroplast
5NC_011163ATA7446194463921 Cicer arietinum chloroplast
6NC_016063ATA611196511198218Cephalotaxus wilsoniana chloroplast DNA
7NC_017602ATA612768812770518Elaeis guineensis chloroplast
8NC_008326ATA6579145793118 Liriodendron tulipifera chloroplast
9NC_010772ATA615352915354618 Heterosigma akashiwo chloroplast
10NC_015605ATA5347503476415Nelumbo lutea chloroplast
11NC_018523ATA511755311756715Saccharina japonica chloroplast
12NC_021109ATA5617016171515Pleodorina starrii plastid
13NC_021109ATA510311810313215Pleodorina starrii plastid
14NC_021649ATA5300223003615Glycine falcata voucher CSIRO:G1718 chloroplast
15NC_001319ATA5233262334015 Marchantia polymorpha chloroplast
16NC_001840ATA5804258043915 Cyanidium caldarium chloroplast
17NC_002652ATA5388853889915 Euglena longa plastid
18NC_002694ATA5244382445215 Lotus japonicus chloroplast
19NC_005087ATA5154861550015 Physcomitrella patens subsp. patens chloroplast
20NC_005353ATA583584915 Chlamydomonas reinhardtii chloroplast
21NC_005353ATA5753607537415 Chlamydomonas reinhardtii chloroplast
22NC_007957ATA5586555866915 Vitis vinifera chloroplast
23NC_008097ATA5226132262715 Chara vulgaris chloroplast
24NC_008235ATA5299582997215 Populus alba chloroplast
25NC_008372ATA5234532346715 Stigeoclonium helveticum chloroplast
26NC_008456ATA5584865850015 Drimys granadensis chloroplast
27NC_008457ATA5697536976715 Piper cenocladum chloroplast
28NC_009598ATA5302483026215 Chloranthus spicatus chloroplast
29NC_011828ATA5256452565915 Trifolium subterraneum chloroplast
30NC_011828ATA5636926370615 Trifolium subterraneum chloroplast
31NC_011954ATA5652066522015 Ephedra equisetina chloroplast
32NC_012052ATA5794837949715 Syntrichia ruralis chloroplast
33NC_013086ATA510879710881115 Selaginella moellendorffii plastid
34NC_014267ATA4150681507912Kryptoperidinium foliaceum chloroplast
35NC_014573ATA410399510400612Geranium palmatum plastid
36NC_014582ATA4448944490512Monsonia speciosa plastid
37NC_014592ATA48900891112Cheilanthes lindheimeri chloroplast
38NC_014674ATA4879628797312Castanea mollissima chloroplast
39NC_014674ATA413309713310812Castanea mollissima chloroplast
40NC_014699ATA4793187932912Equisetum arvense chloroplast
41NC_014807ATA4508495086012Corynocarpus laevigata chloroplast
42NC_014807ATA4634556346612Corynocarpus laevigata chloroplast
43NC_015204ATA4382673827812Gossypium thurberi chloroplast
44NC_015206ATA412771912773012Fragaria vesca subsp. vesca chloroplast
45NC_015206ATA415488715489812Fragaria vesca subsp. vesca chloroplast
46NC_015402ATA4479044791512Ptilidium pulcherrimum chloroplast
47NC_015403ATA4991859919612Fistulifera sp. JPCC DA0580 chloroplast
48NC_015605ATA4346073461812Nelumbo lutea chloroplast
49NC_015621ATA4602716028212Ageratina adenophora chloroplast
50NC_015645ATA4421554216612Schizomeris leibleinii chloroplast
51NC_015645ATA4697516976212Schizomeris leibleinii chloroplast
52NC_015891ATA410147710148812Spirodela polyrhiza chloroplast
53NC_015892ATA4577855779612Magnolia kwangsiensis chloroplast
54NC_015894ATA4542665427712Wolffiella lingulata chloroplast
55NC_015894ATA4825688257912Wolffiella lingulata chloroplast
56NC_016063ATA4787157872612Cephalotaxus wilsoniana chloroplast DNA
57NC_016430ATA4570155702612Eleutherococcus senticosus chloroplast
58NC_016433ATA4554715548212Sesamum indicum chloroplast
59NC_016471ATA4630586306912Neottia nidus-avis plastid
60NC_016471ATA4630736308412Neottia nidus-avis plastid
61NC_016670ATA4383483835912Gossypium darwinii chloroplast
62NC_016670ATA4485424855312Gossypium darwinii chloroplast
63NC_016690ATA4383113832212Gossypium tomentosum chloroplast
64NC_016690ATA4485544856512Gossypium tomentosum chloroplast
65NC_016690ATA414538914540012Gossypium tomentosum chloroplast
66NC_016692ATA4382563826712Gossypium herbaceum subsp. africanum chloroplast
67NC_016703ATA4829298294012Phaeocystis antarctica strain CCMP1374 plastid
68NC_016711ATA4382753828612Gossypium mustelinum chloroplast
69NC_016711ATA4484994851012Gossypium mustelinum chloroplast
70NC_016712ATA4382293824012Gossypium arboreum chloroplast
71NC_016727ATA411584911586012Silene vulgaris chloroplast
72NC_016728ATA44572458312Silene noctiflora chloroplast
73NC_016728ATA410201310202412Silene noctiflora chloroplast
74NC_016728ATA411680511681612Silene noctiflora chloroplast
75NC_016729ATA4537655377612Silene conica chloroplast
76NC_016730ATA411599011600112Silene latifolia chloroplast
77NC_016733ATA4199661997712Pedinomonas minor chloroplast
78NC_016735ATA47200721112Fucus vesiculosus chloroplast
79NC_016736ATA4636046361512Ricinus communis chloroplast
80NC_016736ATA414735014736112Ricinus communis chloroplast
81NC_016753ATA4341343414512Colocasia esculenta chloroplast
82NC_016753ATA4615546156512Colocasia esculenta chloroplast
83NC_016921ATA4665706658112Pentactina rupicola chloroplast
84NC_016921ATA414620514621612Pentactina rupicola chloroplast
85NC_017602ATA411934711935812Elaeis guineensis chloroplast
86NC_017609ATA413284813285912Phalaenopsis equestris chloroplast
87NC_017928ATA46706671712Plasmodium falciparum HB3 apicoplast
88NC_017928ATA47625763612Plasmodium falciparum HB3 apicoplast
89NC_017928ATA4122081221912Plasmodium falciparum HB3 apicoplast
90NC_018051ATA49894990512Vigna unguiculata chloroplast
91NC_018051ATA415198215199312Vigna unguiculata chloroplast
92NC_018110ATA4878638787412Gossypium somalense chloroplast
93NC_018112ATA4878958790612Gossypium areysianum chloroplast
94NC_018357ATA4578805789112Magnolia denudata chloroplast
95NC_018523ATA4436884369912Saccharina japonica chloroplast
96NC_018766ATA412777212778312Fragaria vesca subsp. bracteata chloroplast
97NC_018767ATA412778912780012Fragaria mandshurica plastid
98NC_019601ATA412764212765312Fragaria chiloensis chloroplast
99NC_019601ATA415479915481012Fragaria chiloensis chloroplast
100NC_019602ATA412766012767112Fragaria virginiana chloroplast
101NC_019602ATA415481715482812Fragaria virginiana chloroplast
102NC_020092ATA45649566012Chrysanthemum x morifolium chloroplast
103NC_020098ATA4556715568212Tectona grandis chloroplast
104NC_020152ATA4880348804512Quercus rubra plastid
105NC_020152ATA413344013345112Quercus rubra plastid
106NC_020316ATA4579615797212Magnolia officinalis chloroplast
107NC_020317ATA4579695798012Magnolia officinalis subsp. biloba voucher SC001 chloroplast
108NC_020318ATA4575465755712Magnolia grandiflora voucher NJ016 chloroplast
109NC_020320ATA45638564912Chrysanthemum indicum voucher HeN001 chloroplast
110NC_020361ATA411989911991012Podocarpus totara chloroplast
111NC_020362ATA4329283293912Heliconia collinsiana plastid
112NC_020366ATA4841598417012Bismarckia nobilis plastid
113NC_020367ATA4309863099712Dasypogon bromeliifolius plastid
114NC_020438ATA4790737908412Gonium pectorale chloroplast
115NC_020438ATA422069422070512Gonium pectorale chloroplast
116NC_020460ATA4694966950712Euglena viridis culture-collection ATCC:PRA110 chloroplast
117NC_020607ATA45645565612Artemisia frigida chloroplast
118NC_020795ATA415481715482812Chondrus crispus plastid complete genome
119NC_021101ATA412282212283312Francoa sonchifolia plastid
120NC_021101ATA412599412600512Francoa sonchifolia plastid
121NC_021121ATA411213611214712Ardisia polysticta chloroplast
122NC_021189ATA4369693698012Pyropia haitanensis voucher PH-38 chloroplast
123NC_021189ATA4618626187312Pyropia haitanensis voucher PH-38 chloroplast
124NC_021423ATA4687146872512Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
125NC_021423ATA4737407375112Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
126NC_021425ATA4289552896612Tetracentron sinense chloroplast
127NC_021425ATA4334733348412Tetracentron sinense chloroplast
128NC_021425ATA4335313354212Tetracentron sinense chloroplast
129NC_021425ATA4335463355712Tetracentron sinense chloroplast
130NC_021425ATA4583755838612Tetracentron sinense chloroplast
131NC_021426ATA45266527712Trochodendron aralioides chloroplast
132NC_021426ATA4345763458712Trochodendron aralioides chloroplast
133NC_021426ATA4346633467412Trochodendron aralioides chloroplast
134NC_021426ATA4595445955512Trochodendron aralioides chloroplast
135NC_021429ATA43454346512Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
136NC_021430ATA43456346712Cymbidium sinense voucher KUN:YJB100605 chloroplast
137NC_021431ATA43492350312Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
138NC_021432ATA43427343812Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
139NC_021432ATA412181012182112Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
140NC_021618ATA4866018661212Grateloupia taiwanensis plastid
141NC_021637ATA4847988480912Phaeocystis globosa strain Pg-G(A) chloroplast
142NC_021645ATA4298862989712Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
143NC_021646ATA4592595927012Glycine stenophita voucher CSIRO:G1974 chloroplast
144NC_021648ATA4105631057412Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
145NC_021648ATA4299903000112Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
146NC_021649ATA4592915930212Glycine falcata voucher CSIRO:G1718 chloroplast
147NC_021650ATA4299842999512Glycine syndetika voucher CSIRO:G1300 chloroplast
148NC_021761ATA4564685647912Secale cereale chloroplast
149NC_022099ATA4453064531712Medicago truncatula cultivar Jemalong 2HA plastid
150NC_022099ATA4904819049212Medicago truncatula cultivar Jemalong 2HA plastid
151NC_022100ATA4453624537312Medicago truncatula cultivar Borung plastid
152NC_022100ATA4902809029112Medicago truncatula cultivar Borung plastid
153NC_022136ATA4367393675012Lygodium japonicum chloroplast
154NC_001603ATA4609106092112 Euglena gracilis chloroplast
155NC_001713ATA411673911675012 Odontella sinensis chloroplast
156NC_001840ATA4604686047912 Cyanidium caldarium chloroplast
157NC_002694ATA4244672447812 Lotus japonicus chloroplast
158NC_003119ATA4453064531712 Medicago truncatula chloroplast
159NC_003119ATA4904819049212 Medicago truncatula chloroplast
160NC_004115ATA4216672167812 Chaetosphaeridium globosum chloroplast
161NC_004823ATA45846585712 Eimeria tenella strain Penn State apicoplast
162NC_004993ATA411912911914012 Calycanthus floridus var. glaucus chloroplast
163NC_005086ATA4199231993412 Amborella trichopoda chloroplast
164NC_005086ATA4652726528312 Amborella trichopoda chloroplast
165NC_006050ATA413486713487812 Nymphaea alba chloroplast
166NC_006290ATA4565675657812 Panax ginseng chloroplast
167NC_007499ATA413295113296212 Phalaenopsis aphrodite subsp. formosana chloroplast
168NC_007758ATA47046705712 Theileria parva strain Muguga apicoplast
169NC_007932ATA4188421885312 Porphyra yezoensis chloroplast
170NC_007932ATA4618916190212 Porphyra yezoensis chloroplast
171NC_007944ATA4484624847312 Gossypium hirsutum chloroplast
172NC_007957ATA46681669212 Vitis vinifera chloroplast
173NC_007957ATA412666912668012 Vitis vinifera chloroplast
174NC_007957ATA412977812978912 Vitis vinifera chloroplast
175NC_008097ATA4206602067112 Chara vulgaris chloroplast
176NC_008097ATA4598205983112 Chara vulgaris chloroplast
177NC_008097ATA410329310330412 Chara vulgaris chloroplast
178NC_008097ATA411811511812612 Chara vulgaris chloroplast
179NC_008097ATA412406612407712 Chara vulgaris chloroplast
180NC_008097ATA412683012684112 Chara vulgaris chloroplast
181NC_008097ATA413091313092412 Chara vulgaris chloroplast
182NC_008097ATA413223313224412 Chara vulgaris chloroplast
183NC_008097ATA413225013226112 Chara vulgaris chloroplast
184NC_008117ATA4817408175112 Zygnema circumcarinatum chloroplast
185NC_008334ATA4708917090212 Citrus sinensis chloroplast
186NC_008335ATA44993500412 Platanus occidentalis chloroplast
187NC_008335ATA4467654677612 Platanus occidentalis chloroplast
188NC_008335ATA4612856129612 Platanus occidentalis chloroplast
189NC_008372ATA4543455435612 Stigeoclonium helveticum chloroplast
190NC_008407ATA4450094502012 Jasminum nudiflorum chloroplast
191NC_008457ATA4700037001412 Piper cenocladum chloroplast
192NC_008457ATA413056213057312 Piper cenocladum chloroplast
193NC_008641ATA4383133832412 Gossypium barbadense chloroplast
194NC_008641ATA4485184852912 Gossypium barbadense chloroplast
195NC_008788ATA412424912426012 Nuphar advena chloroplast
196NC_008788ATA413543113544212 Nuphar advena chloroplast
197NC_009273ATA4359483595912 Lepidium virginicum chloroplast
198NC_009273ATA411396111397212 Lepidium virginicum chloroplast
199NC_009275ATA4359863599712 Nasturtium officinale chloroplast
200NC_009573ATA4179561796712 Rhodomonas salina chloroplast
201NC_009599ATA4495894960012 Buxus microphylla chloroplast
202NC_009599ATA4578565786712 Buxus microphylla chloroplast
203NC_009618ATA412368512369612 Cycas taitungensis chloroplast
204NC_009681ATA412022212023312 Leptosira terrestris chloroplast
205NC_009681ATA413753013754112 Leptosira terrestris chloroplast
206NC_009765ATA4364183642912 Cuscuta gronovii chloroplast
207NC_009766ATA4758477585812 Cuscuta reflexa chloroplast
208NC_009808ATA4742447425512 Ipomoea purpurea chloroplast
209NC_010323ATA49341935212 Carica papaya chloroplast
210NC_010323ATA4579335794412 Carica papaya chloroplast
211NC_010433ATA4389603897112 Manihot esculenta chloroplast
212NC_010548ATA4869108692112 Cryptomeria japonica chloroplast
213NC_011163ATA4247902480112 Cicer arietinum chloroplast
214NC_011163ATA4651736518412 Cicer arietinum chloroplast
215NC_011600ATA4408204083112 Vaucheria litorea chloroplast
216NC_011828ATA4452514526212 Trifolium subterraneum chloroplast
217NC_012052ATA4163511636212 Syntrichia ruralis chloroplast
218NC_012052ATA4448854489612 Syntrichia ruralis chloroplast
219NC_012052ATA4454434545412 Syntrichia ruralis chloroplast
220NC_012052ATA4542875429812 Syntrichia ruralis chloroplast
221NC_012052ATA410156210157312 Syntrichia ruralis chloroplast
222NC_012224ATA4105811059212 Jatropha curcas chloroplast
223NC_012224ATA412796112797212 Jatropha curcas chloroplast
224NC_013359ATA4979769798712 Bryopsis hypnoides chloroplast
225NC_013553ATA4359353594612 Parthenium argentatum chloroplast
226NC_013553ATA4758117582212 Parthenium argentatum chloroplast
227NC_013823ATA4342193423012 Typha latifolia chloroplast
228NC_013843ATA49918992912 Vigna radiata chloroplast
229NC_013991ATA4839078391812 Phoenix dactylifera chloroplast
230NC_013991ATA412047812048912 Phoenix dactylifera chloroplast
231NC_014063ATA49759977012 Lathyrus sativus chloroplast