Chloroplast Motifs - Imperfect AGT Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_004543 | AGT | 7 | 158621 | 158641 | 21 | Anthoceros formosae chloroplast |
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| 2 | NC_017754 | AGT | 5 | 55944 | 55958 | 15 | Eutreptiella gymnastica plastid |
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| 3 | NC_021430 | AGT | 5 | 32156 | 32169 | 14 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
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| 4 | NC_021431 | AGT | 5 | 32254 | 32267 | 14 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
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| 5 | NC_021432 | AGT | 5 | 31733 | 31746 | 14 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
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| 6 | NC_002693 | AGT | 5 | 71030 | 71044 | 15 | Oenothera elata subsp. hookeri plastid plastome I |
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| 7 | NC_010358 | AGT | 5 | 70056 | 70070 | 15 | Oenothera argillicola chloroplast |
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| 8 | NC_010360 | AGT | 5 | 71045 | 71059 | 15 | Oenothera glazioviana chloroplast |
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| 9 | NC_010361 | AGT | 5 | 70556 | 70570 | 15 | Oenothera biennis chloroplast |
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| 10 | NC_010362 | AGT | 5 | 69415 | 69429 | 15 | Oenothera parviflora chloroplast |
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| 11 | NC_010548 | AGT | 5 | 14941 | 14954 | 14 | Cryptomeria japonica chloroplast |
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| 12 | NC_010772 | AGT | 5 | 47769 | 47782 | 14 | Heterosigma akashiwo chloroplast |
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| 13 | NC_011087 | AGT | 4 | 164801 | 164811 | 11 | Paulinella chromatophora chromatophore |
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| 14 | NC_011087 | AGT | 4 | 594548 | 594559 | 12 | Paulinella chromatophora chromatophore |
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| 15 | NC_011087 | AGT | 4 | 628445 | 628456 | 12 | Paulinella chromatophora chromatophore |
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| 16 | NC_011087 | AGT | 4 | 728408 | 728419 | 12 | Paulinella chromatophora chromatophore |
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| 17 | NC_011087 | AGT | 4 | 734901 | 734912 | 12 | Paulinella chromatophora chromatophore |
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| 18 | NC_011087 | AGT | 4 | 949280 | 949292 | 13 | Paulinella chromatophora chromatophore |
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| 19 | NC_014267 | AGT | 4 | 129112 | 129122 | 11 | Kryptoperidinium foliaceum chloroplast |
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| 20 | NC_014340 | AGT | 4 | 95389 | 95399 | 11 | Chromera velia strain CCMP2878 chloroplast |
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| 21 | NC_014348 | AGT | 4 | 72362 | 72372 | 11 | Pteridium aquilinum subsp. aquilinum chloroplast |
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| 22 | NC_014570 | AGT | 4 | 76309 | 76320 | 12 | Eucalyptus grandis chloroplast |
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| 23 | NC_014675 | AGT | 4 | 143911 | 143922 | 12 | Isoetes flaccida chloroplast |
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| 24 | NC_014874 | AGT | 4 | 17116 | 17127 | 12 | Rhizanthella gardneri plastid |
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| 25 | NC_015084 | AGT | 4 | 108218 | 108229 | 12 | Coccomyxa sp. C-169 plastid |
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| 26 | NC_015359 | AGT | 4 | 82708 | 82719 | 12 | Chlorella variabilis plastid |
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| 27 | NC_015401 | AGT | 4 | 422 | 433 | 12 | Olea europaea subsp. europaea plastid |
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| 28 | NC_015403 | AGT | 4 | 61571 | 61582 | 12 | Fistulifera sp. JPCC DA0580 chloroplast |
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| 29 | NC_015543 | AGT | 4 | 120390 | 120400 | 11 | Jacobaea vulgaris chloroplast |
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| 30 | NC_015604 | AGT | 4 | 422 | 433 | 12 | Olea europaea subsp. cuspidata chloroplast |
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| 31 | NC_015605 | AGT | 4 | 72094 | 72106 | 13 | Nelumbo lutea chloroplast |
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| 32 | NC_015605 | AGT | 4 | 133600 | 133611 | 12 | Nelumbo lutea chloroplast |
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| 33 | NC_015608 | AGT | 4 | 421 | 432 | 12 | Olea woodiana subsp. woodiana chloroplast |
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| 34 | NC_015610 | AGT | 4 | 72137 | 72149 | 13 | Nelumbo nucifera chloroplast |
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| 35 | NC_015610 | AGT | 4 | 133689 | 133700 | 12 | Nelumbo nucifera chloroplast |
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| 36 | NC_015623 | AGT | 4 | 422 | 433 | 12 | Olea europaea subsp. maroccana chloroplast |
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| 37 | NC_015803 | AGT | 4 | 6906 | 6917 | 12 | Indocalamus longiauritus plastid |
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| 38 | NC_015803 | AGT | 4 | 45188 | 45198 | 11 | Indocalamus longiauritus plastid |
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| 39 | NC_015817 | AGT | 4 | 6914 | 6925 | 12 | Phyllostachys edulis chloroplast |
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| 40 | NC_015817 | AGT | 4 | 45124 | 45134 | 11 | Phyllostachys edulis chloroplast |
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| 41 | NC_015820 | AGT | 4 | 6914 | 6925 | 12 | Acidosasa purpurea chloroplast |
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| 42 | NC_015820 | AGT | 4 | 45194 | 45204 | 11 | Acidosasa purpurea chloroplast |
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| 43 | NC_015826 | AGT | 4 | 6906 | 6917 | 12 | Phyllostachys nigra var. henonis chloroplast |
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| 44 | NC_015826 | AGT | 4 | 45097 | 45107 | 11 | Phyllostachys nigra var. henonis chloroplast |
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| 45 | NC_015830 | AGT | 4 | 44761 | 44771 | 11 | Bambusa emeiensis chloroplast |
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| 46 | NC_015831 | AGT | 4 | 6911 | 6922 | 12 | Ferrocalamus rimosivaginus plastid |
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| 47 | NC_015831 | AGT | 4 | 44861 | 44871 | 11 | Ferrocalamus rimosivaginus plastid |
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| 48 | NC_015891 | AGT | 4 | 50705 | 50716 | 12 | Spirodela polyrhiza chloroplast |
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| 49 | NC_015892 | AGT | 4 | 48111 | 48122 | 12 | Magnolia kwangsiensis chloroplast |
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| 50 | NC_015892 | AGT | 4 | 69074 | 69086 | 13 | Magnolia kwangsiensis chloroplast |
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| 51 | NC_015899 | AGT | 4 | 9885 | 9895 | 11 | Wolffia australiana chloroplast |
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| 52 | NC_015899 | AGT | 4 | 50347 | 50358 | 12 | Wolffia australiana chloroplast |
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| 53 | NC_015983 | AGT | 4 | 73582 | 73593 | 12 | Cucumis melo subsp. melo chloroplast |
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| 54 | NC_016069 | AGT | 4 | 39374 | 39384 | 11 | Picea morrisonicola chloroplast |
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| 55 | NC_016471 | AGT | 4 | 18500 | 18511 | 12 | Neottia nidus-avis plastid |
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| 56 | NC_016699 | AGT | 4 | 6908 | 6919 | 12 | Phyllostachys propinqua chloroplast |
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| 57 | NC_016699 | AGT | 4 | 45128 | 45138 | 11 | Phyllostachys propinqua chloroplast |
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| 58 | NC_016708 | AGT | 4 | 13243 | 13254 | 12 | Millettia pinnata chloroplast |
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| 59 | NC_016733 | AGT | 4 | 37476 | 37486 | 11 | Pedinomonas minor chloroplast |
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| 60 | NC_016733 | AGT | 4 | 41579 | 41590 | 12 | Pedinomonas minor chloroplast |
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| 61 | NC_016753 | AGT | 4 | 33088 | 33099 | 12 | Colocasia esculenta chloroplast |
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| 62 | NC_016753 | AGT | 4 | 48999 | 49010 | 12 | Colocasia esculenta chloroplast |
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| 63 | NC_016986 | AGT | 4 | 8177 | 8189 | 13 | Ginkgo biloba chloroplast |
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| 64 | NC_017006 | AGT | 4 | 1604 | 1614 | 11 | Mankyua chejuensis chloroplast |
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| 65 | NC_017006 | AGT | 4 | 50925 | 50935 | 11 | Mankyua chejuensis chloroplast |
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| 66 | NC_017602 | AGT | 4 | 45923 | 45934 | 12 | Elaeis guineensis chloroplast |
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| 67 | NC_017609 | AGT | 4 | 38122 | 38134 | 13 | Phalaenopsis equestris chloroplast |
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| 68 | NC_017609 | AGT | 4 | 47236 | 47247 | 12 | Phalaenopsis equestris chloroplast |
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| 69 | NC_018357 | AGT | 4 | 48193 | 48204 | 12 | Magnolia denudata chloroplast |
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| 70 | NC_018357 | AGT | 4 | 69161 | 69173 | 13 | Magnolia denudata chloroplast |
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| 71 | NC_019628 | AGT | 4 | 23468 | 23478 | 11 | Pellia endiviifolia chloroplast |
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| 72 | NC_019628 | AGT | 4 | 116178 | 116189 | 12 | Pellia endiviifolia chloroplast |
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| 73 | NC_019648 | AGT | 4 | 42358 | 42368 | 11 | Festuca altissima plastid |
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| 74 | NC_019649 | AGT | 4 | 41253 | 41263 | 11 | Festuca ovina plastid |
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| 75 | NC_019650 | AGT | 4 | 42304 | 42314 | 11 | Festuca pratensis plastid |
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| 76 | NC_019651 | AGT | 4 | 42233 | 42243 | 11 | Lolium multiflorum plastid |
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| 77 | NC_020018 | AGT | 4 | 39052 | 39064 | 13 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
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| 78 | NC_020146 | AGT | 4 | 325 | 336 | 12 | Equisetum hyemale chloroplast |
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| 79 | NC_020316 | AGT | 4 | 69236 | 69248 | 13 | Magnolia officinalis chloroplast |
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| 80 | NC_020317 | AGT | 4 | 69241 | 69253 | 13 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
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| 81 | NC_020318 | AGT | 4 | 47881 | 47892 | 12 | Magnolia grandiflora voucher NJ016 chloroplast |
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| 82 | NC_020318 | AGT | 4 | 68822 | 68834 | 13 | Magnolia grandiflora voucher NJ016 chloroplast |
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| 83 | NC_020321 | AGT | 4 | 94685 | 94695 | 11 | Taxus mairei voucher NN014 chloroplast |
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| 84 | NC_020341 | AGT | 4 | 6919 | 6930 | 12 | Arundinaria gigantea chloroplast |
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| 85 | NC_020341 | AGT | 4 | 45111 | 45121 | 11 | Arundinaria gigantea chloroplast |
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| 86 | NC_020361 | AGT | 4 | 132047 | 132058 | 12 | Podocarpus totara chloroplast |
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| 87 | NC_020363 | AGT | 4 | 118881 | 118892 | 12 | Zingiber spectabile plastid |
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| 88 | NC_020364 | AGT | 4 | 45900 | 45911 | 12 | Pseudophoenix vinifera plastid |
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| 89 | NC_020365 | AGT | 4 | 45794 | 45805 | 12 | Calamus caryotoides plastid |
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| 90 | NC_020366 | AGT | 4 | 46589 | 46600 | 12 | Bismarckia nobilis plastid |
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| 91 | NC_020367 | AGT | 4 | 47702 | 47713 | 12 | Dasypogon bromeliifolius plastid |
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| 92 | NC_020438 | AGT | 4 | 80601 | 80612 | 12 | Gonium pectorale chloroplast |
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| 93 | NC_020438 | AGT | 4 | 88446 | 88456 | 11 | Gonium pectorale chloroplast |
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| 94 | NC_020607 | AGT | 4 | 113271 | 113281 | 11 | Artemisia frigida chloroplast |
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| 95 | NC_020795 | AGT | 4 | 100150 | 100161 | 12 | Chondrus crispus plastid complete genome |
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| 96 | NC_021075 | AGT | 4 | 4517 | 4527 | 11 | Calliarthron tuberculosum chloroplast |
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| 97 | NC_021075 | AGT | 4 | 118649 | 118660 | 12 | Calliarthron tuberculosum chloroplast |
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| 98 | NC_021109 | AGT | 4 | 66882 | 66892 | 11 | Pleodorina starrii plastid |
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| 99 | NC_021109 | AGT | 4 | 183589 | 183599 | 11 | Pleodorina starrii plastid |
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| 100 | NC_021189 | AGT | 4 | 7978 | 7989 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 101 | NC_021189 | AGT | 4 | 78531 | 78541 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 102 | NC_021189 | AGT | 4 | 143936 | 143947 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 103 | NC_021372 | AGT | 4 | 44962 | 44972 | 11 | Pharus latifolius chloroplast |
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| 104 | NC_021372 | AGT | 4 | 47564 | 47575 | 12 | Pharus latifolius chloroplast |
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| 105 | NC_021426 | AGT | 4 | 70486 | 70498 | 13 | Trochodendron aralioides chloroplast |
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| 106 | NC_021429 | AGT | 4 | 46627 | 46638 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
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| 107 | NC_021430 | AGT | 4 | 46433 | 46444 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
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| 108 | NC_021431 | AGT | 4 | 46531 | 46542 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
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| 109 | NC_021432 | AGT | 4 | 46220 | 46231 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
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| 110 | NC_021433 | AGT | 4 | 46518 | 46529 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
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| 111 | NC_021437 | AGT | 4 | 95158 | 95169 | 12 | Cunninghamia lanceolata chloroplast |
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| 112 | NC_021618 | AGT | 4 | 136756 | 136767 | 12 | Grateloupia taiwanensis plastid |
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| 113 | NC_021760 | AGT | 4 | 42800 | 42810 | 11 | Triticum monococcum chloroplast |
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| 114 | NC_021761 | AGT | 4 | 42866 | 42876 | 11 | Secale cereale chloroplast |
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| 115 | NC_021762 | AGT | 4 | 42772 | 42782 | 11 | Triticum urartu chloroplast |
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| 116 | NC_021936 | AGT | 4 | 49329 | 49340 | 12 | Najas flexilis chloroplast |
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| 117 | NC_022133 | AGT | 4 | 42692 | 42702 | 11 | Aegilops tauschii chloroplast |
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| 118 | NC_022135 | AGT | 4 | 42865 | 42875 | 11 | Aegilops speltoides isolate SPE0661 chloroplast |
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| 119 | NC_022136 | AGT | 4 | 157171 | 157186 | 16 | Lygodium japonicum chloroplast |
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| 120 | NC_000927 | AGT | 4 | 26880 | 26890 | 11 | Nephroselmis olivacea chloroplast |
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| 121 | NC_001675 | AGT | 4 | 38774 | 38786 | 13 | Cyanophora paradoxa cyanelle |
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| 122 | NC_001675 | AGT | 4 | 44877 | 44887 | 11 | Cyanophora paradoxa cyanelle |
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| 123 | NC_001840 | AGT | 4 | 127567 | 127577 | 11 | Cyanidium caldarium chloroplast |
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| 124 | NC_001840 | AGT | 4 | 145165 | 145176 | 12 | Cyanidium caldarium chloroplast |
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| 125 | NC_002693 | AGT | 4 | 120923 | 120933 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
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| 126 | NC_002762 | AGT | 4 | 43115 | 43125 | 11 | Triticum aestivum chloroplast |
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| 127 | NC_004543 | AGT | 4 | 155878 | 155888 | 11 | Anthoceros formosae chloroplast |
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| 128 | NC_004766 | AGT | 4 | 29492 | 29502 | 11 | Adiantum capillus-veneris chloroplast |
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| 129 | NC_004799 | AGT | 4 | 51568 | 51580 | 13 | Cyanidioschyzon merolae strain 10D chloroplast |
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| 130 | NC_004799 | AGT | 4 | 76788 | 76799 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
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| 131 | NC_004823 | AGT | 4 | 214 | 225 | 12 | Eimeria tenella strain Penn State apicoplast |
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| 132 | NC_004993 | AGT | 4 | 46869 | 46880 | 12 | Calycanthus floridus var. glaucus chloroplast |
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| 133 | NC_006861 | AGT | 4 | 154143 | 154154 | 12 | Huperzia lucidula chloroplast |
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| 134 | NC_007407 | AGT | 4 | 46435 | 46446 | 12 | Acorus calamus plastid |
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| 135 | NC_007499 | AGT | 4 | 47101 | 47112 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
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| 136 | NC_007957 | AGT | 4 | 69938 | 69950 | 13 | Vitis vinifera chloroplast |
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| 137 | NC_007977 | AGT | 4 | 121101 | 121111 | 11 | Helianthus annuus chloroplast |
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| 138 | NC_008099 | AGT | 4 | 9475 | 9486 | 12 | Oltmannsiellopsis viridis chloroplast |
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| 139 | NC_008099 | AGT | 4 | 78422 | 78433 | 12 | Oltmannsiellopsis viridis chloroplast |
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| 140 | NC_008099 | AGT | 4 | 130568 | 130578 | 11 | Oltmannsiellopsis viridis chloroplast |
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| 141 | NC_008101 | AGT | 4 | 153119 | 153130 | 12 | Scenedesmus obliquus chloroplast |
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| 142 | NC_008115 | AGT | 4 | 76431 | 76442 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
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| 143 | NC_008235 | AGT | 4 | 49186 | 49197 | 12 | Populus alba chloroplast |
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| 144 | NC_008326 | AGT | 4 | 48263 | 48274 | 12 | Liriodendron tulipifera chloroplast |
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| 145 | NC_008336 | AGT | 4 | 129603 | 129614 | 12 | Nandina domestica chloroplast |
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| 146 | NC_008372 | AGT | 4 | 47705 | 47717 | 13 | Stigeoclonium helveticum chloroplast |
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| 147 | NC_008456 | AGT | 4 | 48709 | 48720 | 12 | Drimys granadensis chloroplast |
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| 148 | NC_008457 | AGT | 4 | 47461 | 47472 | 12 | Piper cenocladum chloroplast |
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| 149 | NC_008590 | AGT | 4 | 43252 | 43262 | 11 | Hordeum vulgare subsp. vulgare chloroplast |
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| 150 | NC_008591 | AGT | 4 | 42920 | 42930 | 11 | Agrostis stolonifera chloroplast |
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| 151 | NC_009143 | AGT | 4 | 49544 | 49555 | 12 | Populus trichocarpa chloroplast |
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| 152 | NC_009598 | AGT | 4 | 47351 | 47362 | 12 | Chloranthus spicatus chloroplast |
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| 153 | NC_009600 | AGT | 4 | 48893 | 48904 | 12 | Illicium oligandrum chloroplast |
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| 154 | NC_009618 | AGT | 4 | 43297 | 43308 | 12 | Cycas taitungensis chloroplast |
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| 155 | NC_009950 | AGT | 4 | 42352 | 42362 | 11 | Lolium perenne chloroplast |
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| 156 | NC_009962 | AGT | 4 | 47289 | 47300 | 12 | Ceratophyllum demersum chloroplast |
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| 157 | NC_010093 | AGT | 4 | 46115 | 46126 | 12 | Acorus americanus chloroplast |
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| 158 | NC_010358 | AGT | 4 | 120182 | 120192 | 11 | Oenothera argillicola chloroplast |
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| 159 | NC_010360 | AGT | 4 | 120817 | 120827 | 11 | Oenothera glazioviana chloroplast |
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| 160 | NC_010361 | AGT | 4 | 120303 | 120313 | 11 | Oenothera biennis chloroplast |
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| 161 | NC_010362 | AGT | 4 | 119016 | 119026 | 11 | Oenothera parviflora chloroplast |
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| 162 | NC_011032 | AGT | 4 | 42383 | 42393 | 11 | Brachypodium distachyon chloroplast |
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| 163 | NC_011713 | AGT | 4 | 42732 | 42742 | 11 | Festuca arundinacea chloroplast |
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| 164 | NC_011828 | AGT | 4 | 55906 | 55916 | 11 | Trifolium subterraneum chloroplast |
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| 165 | NC_011942 | AGT | 4 | 65528 | 65538 | 11 | Gnetum parvifolium chloroplast |
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| 166 | NC_012615 | AGT | 4 | 69140 | 69152 | 13 | Megaleranthis saniculifolia chloroplast |
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| 167 | NC_012615 | AGT | 4 | 113123 | 113134 | 12 | Megaleranthis saniculifolia chloroplast |
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| 168 | NC_012818 | AGT | 4 | 36252 | 36262 | 11 | Alsophila spinulosa chloroplast |
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| 169 | NC_012818 | AGT | 4 | 156621 | 156631 | 11 | Alsophila spinulosa chloroplast |
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| 170 | NC_012927 | AGT | 4 | 44637 | 44647 | 11 | Bambusa oldhamii chloroplast |
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| 171 | NC_012978 | AGT | 4 | 9720 | 9731 | 12 | Parachlorella kessleri chloroplast |
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| 172 | NC_013086 | AGT | 4 | 5805 | 5817 | 13 | Selaginella moellendorffii plastid |
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| 173 | NC_013088 | AGT | 4 | 44798 | 44808 | 11 | Dendrocalamus latiflorus chloroplast |
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| 174 | NC_013823 | AGT | 4 | 48430 | 48441 | 12 | Typha latifolia chloroplast |
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| 175 | NC_013991 | AGT | 4 | 46328 | 46339 | 12 | Phoenix dactylifera chloroplast |
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| 176 | NC_014062 | AGT | 4 | 47318 | 47329 | 12 | Anomochloa marantoidea chloroplast |
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| 177 | NC_014063 | AGT | 4 | 118135 | 118145 | 11 | Lathyrus sativus chloroplast |
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| 178 | NC_013707 | AGT | 4 | 399 | 410 | 12 | Olea europaea chloroplast |
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