Chloroplast Motifs - Imperfect AGAAT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | AGAAT | 15 | 18106 | 18180 | 75 | Zygnema circumcarinatum chloroplast |
2 | NC_018109 | AGAAT | 4 | 44314 | 44333 | 20 | Gossypium incanum chloroplast |
3 | NC_016668 | AGAAT | 4 | 44686 | 44705 | 20 | Gossypium raimondii chloroplast |
4 | NC_017894 | AGAAT | 4 | 44705 | 44724 | 20 | Gossypium gossypioides chloroplast |
5 | NC_008097 | AGAAT | 4 | 132953 | 132973 | 21 | Chara vulgaris chloroplast |
6 | NC_018110 | AGAAT | 4 | 44448 | 44467 | 20 | Gossypium somalense chloroplast |
7 | NC_009598 | AGAAT | 4 | 9395 | 9415 | 21 | Chloranthus spicatus chloroplast |
8 | NC_018111 | AGAAT | 4 | 44283 | 44302 | 20 | Gossypium capitis-viridis chloroplast |
9 | NC_014675 | AGAAT | 4 | 33213 | 33232 | 20 | Isoetes flaccida chloroplast |
10 | NC_018112 | AGAAT | 4 | 44472 | 44491 | 20 | Gossypium areysianum chloroplast |
11 | NC_020098 | AGAAT | 3 | 67772 | 67786 | 15 | Tectona grandis chloroplast |
12 | NC_002762 | AGAAT | 3 | 80754 | 80767 | 14 | Triticum aestivum chloroplast |
13 | NC_020341 | AGAAT | 3 | 83032 | 83045 | 14 | Arundinaria gigantea chloroplast |
14 | NC_018113 | AGAAT | 3 | 50340 | 50354 | 15 | Gossypium robinsonii chloroplast |
15 | NC_018112 | AGAAT | 3 | 50224 | 50238 | 15 | Gossypium areysianum chloroplast |
16 | NC_021760 | AGAAT | 3 | 81377 | 81390 | 14 | Triticum monococcum chloroplast |
17 | NC_021761 | AGAAT | 3 | 81163 | 81176 | 14 | Secale cereale chloroplast |
18 | NC_021762 | AGAAT | 3 | 81054 | 81067 | 14 | Triticum urartu chloroplast |
19 | NC_022133 | AGAAT | 3 | 80166 | 80179 | 14 | Aegilops tauschii chloroplast |
20 | NC_022135 | AGAAT | 3 | 79857 | 79870 | 14 | Aegilops speltoides isolate SPE0661 chloroplast |
21 | NC_001320 | AGAAT | 3 | 80993 | 81006 | 14 | Oryza sativa Japonica Group plastid |
22 | NC_001865 | AGAAT | 3 | 21486 | 21500 | 15 | Chlorella vulgaris chloroplast |
23 | NC_013088 | AGAAT | 3 | 83393 | 83406 | 14 | Dendrocalamus latiflorus chloroplast |
24 | NC_005973 | AGAAT | 3 | 80946 | 80959 | 14 | Oryza nivara chloroplast |
25 | NC_006861 | AGAAT | 3 | 59404 | 59418 | 15 | Huperzia lucidula chloroplast |
26 | NC_006861 | AGAAT | 3 | 140454 | 140468 | 15 | Huperzia lucidula chloroplast |
27 | NC_007942 | AGAAT | 3 | 10567 | 10580 | 14 | Glycine max chloroplast |
28 | NC_007944 | AGAAT | 3 | 50709 | 50723 | 15 | Gossypium hirsutum chloroplast |
29 | NC_008155 | AGAAT | 3 | 80950 | 80963 | 14 | Oryza sativa Indica Group chloroplast |
30 | NC_008590 | AGAAT | 3 | 81537 | 81550 | 14 | Hordeum vulgare subsp. vulgare chloroplast |
31 | NC_008641 | AGAAT | 3 | 50762 | 50776 | 15 | Gossypium barbadense chloroplast |
32 | NC_011032 | AGAAT | 3 | 79853 | 79866 | 14 | Brachypodium distachyon chloroplast |
33 | NC_012927 | AGAAT | 3 | 83289 | 83302 | 14 | Bambusa oldhamii chloroplast |
34 | NC_016668 | AGAAT | 3 | 50524 | 50538 | 15 | Gossypium raimondii chloroplast |
35 | NC_014674 | AGAAT | 3 | 10131 | 10145 | 15 | Castanea mollissima chloroplast |
36 | NC_015204 | AGAAT | 3 | 50672 | 50686 | 15 | Gossypium thurberi chloroplast |
37 | NC_015803 | AGAAT | 3 | 83672 | 83685 | 14 | Indocalamus longiauritus plastid |
38 | NC_015817 | AGAAT | 3 | 83612 | 83625 | 14 | Phyllostachys edulis chloroplast |
39 | NC_015820 | AGAAT | 3 | 83670 | 83683 | 14 | Acidosasa purpurea chloroplast |
40 | NC_015826 | AGAAT | 3 | 83633 | 83646 | 14 | Phyllostachys nigra var. henonis chloroplast |
41 | NC_015830 | AGAAT | 3 | 83392 | 83405 | 14 | Bambusa emeiensis chloroplast |
42 | NC_015831 | AGAAT | 3 | 83488 | 83501 | 14 | Ferrocalamus rimosivaginus plastid |
43 | NC_015990 | AGAAT | 3 | 82050 | 82063 | 14 | Panicum virgatum chloroplast |
44 | NC_018111 | AGAAT | 3 | 50114 | 50128 | 15 | Gossypium capitis-viridis chloroplast |
45 | NC_016670 | AGAAT | 3 | 50797 | 50811 | 15 | Gossypium darwinii chloroplast |
46 | NC_016677 | AGAAT | 3 | 82264 | 82277 | 14 | Leersia tisserantii plastid |
47 | NC_016690 | AGAAT | 3 | 50820 | 50834 | 15 | Gossypium tomentosum chloroplast |
48 | NC_016692 | AGAAT | 3 | 50672 | 50686 | 15 | Gossypium herbaceum subsp. africanum chloroplast |
49 | NC_016699 | AGAAT | 3 | 83626 | 83639 | 14 | Phyllostachys propinqua chloroplast |
50 | NC_016711 | AGAAT | 3 | 50725 | 50739 | 15 | Gossypium mustelinum chloroplast |
51 | NC_016712 | AGAAT | 3 | 50632 | 50646 | 15 | Gossypium arboreum chloroplast |
52 | NC_016718 | AGAAT | 3 | 82427 | 82440 | 14 | Rhynchoryza subulata plastid |
53 | NC_016927 | AGAAT | 3 | 81006 | 81019 | 14 | Oryza meridionalis chloroplast |
54 | NC_017835 | AGAAT | 3 | 80995 | 81008 | 14 | Oryza rufipogon chloroplast |
55 | NC_017894 | AGAAT | 3 | 50568 | 50582 | 15 | Gossypium gossypioides chloroplast |
56 | NC_018109 | AGAAT | 3 | 50055 | 50069 | 15 | Gossypium incanum chloroplast |
57 | NC_018110 | AGAAT | 3 | 50200 | 50214 | 15 | Gossypium somalense chloroplast |