Chloroplast Motifs - Imperfect AACA Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_014346 | AACA | 3 | 112403 | 112414 | 12 | Floydiella terrestris chloroplast |
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| 2 | NC_014346 | AACA | 3 | 369459 | 369470 | 12 | Floydiella terrestris chloroplast |
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| 3 | NC_014807 | AACA | 3 | 121528 | 121539 | 12 | Corynocarpus laevigata chloroplast |
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| 4 | NC_015113 | AACA | 3 | 113071 | 113082 | 12 | Anthriscus cerefolium chloroplast |
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| 5 | NC_015543 | AACA | 3 | 23372 | 23382 | 11 | Jacobaea vulgaris chloroplast |
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| 6 | NC_015605 | AACA | 3 | 34025 | 34036 | 12 | Nelumbo lutea chloroplast |
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| 7 | NC_015610 | AACA | 3 | 34152 | 34163 | 12 | Nelumbo nucifera chloroplast |
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| 8 | NC_015621 | AACA | 3 | 23704 | 23714 | 11 | Ageratina adenophora chloroplast |
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| 9 | NC_015645 | AACA | 3 | 109069 | 109081 | 13 | Schizomeris leibleinii chloroplast |
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| 10 | NC_015645 | AACA | 3 | 113655 | 113665 | 11 | Schizomeris leibleinii chloroplast |
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| 11 | NC_016058 | AACA | 3 | 56493 | 56504 | 12 | Larix decidua chloroplast |
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| 12 | NC_016433 | AACA | 3 | 6109 | 6121 | 13 | Sesamum indicum chloroplast |
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| 13 | NC_016468 | AACA | 3 | 113541 | 113552 | 12 | Boea hygrometrica chloroplast |
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| 14 | NC_016668 | AACA | 3 | 131157 | 131168 | 12 | Gossypium raimondii chloroplast |
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| 15 | NC_016670 | AACA | 3 | 131358 | 131369 | 12 | Gossypium darwinii chloroplast |
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| 16 | NC_016677 | AACA | 3 | 45881 | 45891 | 11 | Leersia tisserantii plastid |
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| 17 | NC_016690 | AACA | 3 | 131400 | 131411 | 12 | Gossypium tomentosum chloroplast |
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| 18 | NC_016692 | AACA | 3 | 131276 | 131287 | 12 | Gossypium herbaceum subsp. africanum chloroplast |
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| 19 | NC_016711 | AACA | 3 | 131284 | 131295 | 12 | Gossypium mustelinum chloroplast |
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| 20 | NC_016712 | AACA | 3 | 131194 | 131205 | 12 | Gossypium arboreum chloroplast |
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| 21 | NC_016718 | AACA | 3 | 45844 | 45854 | 11 | Rhynchoryza subulata plastid |
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| 22 | NC_016730 | AACA | 3 | 47484 | 47495 | 12 | Silene latifolia chloroplast |
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| 23 | NC_016732 | AACA | 3 | 85126 | 85136 | 11 | Dunaliella salina chloroplast |
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| 24 | NC_016732 | AACA | 3 | 267298 | 267308 | 11 | Dunaliella salina chloroplast |
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| 25 | NC_016733 | AACA | 3 | 65831 | 65842 | 12 | Pedinomonas minor chloroplast |
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| 26 | NC_016733 | AACA | 3 | 79710 | 79720 | 11 | Pedinomonas minor chloroplast |
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| 27 | NC_016927 | AACA | 3 | 44661 | 44671 | 11 | Oryza meridionalis chloroplast |
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| 28 | NC_017835 | AACA | 3 | 44650 | 44660 | 11 | Oryza rufipogon chloroplast |
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| 29 | NC_017894 | AACA | 3 | 130997 | 131008 | 12 | Gossypium gossypioides chloroplast |
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| 30 | NC_018109 | AACA | 3 | 115175 | 115186 | 12 | Gossypium incanum chloroplast |
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| 31 | NC_018109 | AACA | 3 | 130282 | 130293 | 12 | Gossypium incanum chloroplast |
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| 32 | NC_018110 | AACA | 3 | 115450 | 115461 | 12 | Gossypium somalense chloroplast |
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| 33 | NC_018110 | AACA | 3 | 130585 | 130596 | 12 | Gossypium somalense chloroplast |
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| 34 | NC_018111 | AACA | 3 | 130455 | 130466 | 12 | Gossypium capitis-viridis chloroplast |
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| 35 | NC_018112 | AACA | 3 | 115482 | 115493 | 12 | Gossypium areysianum chloroplast |
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| 36 | NC_018112 | AACA | 3 | 130618 | 130629 | 12 | Gossypium areysianum chloroplast |
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| 37 | NC_018523 | AACA | 3 | 87635 | 87645 | 11 | Saccharina japonica chloroplast |
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| 38 | NC_020092 | AACA | 3 | 23616 | 23626 | 11 | Chrysanthemum x morifolium chloroplast |
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| 39 | NC_020098 | AACA | 3 | 6223 | 6235 | 13 | Tectona grandis chloroplast |
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| 40 | NC_020146 | AACA | 3 | 8430 | 8441 | 12 | Equisetum hyemale chloroplast |
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| 41 | NC_020320 | AACA | 3 | 23621 | 23631 | 11 | Chrysanthemum indicum voucher HeN001 chloroplast |
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| 42 | NC_020321 | AACA | 3 | 4772 | 4783 | 12 | Taxus mairei voucher NN014 chloroplast |
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| 43 | NC_020371 | AACA | 3 | 9584 | 9594 | 11 | Pavlova lutheri chloroplast |
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| 44 | NC_020431 | AACA | 3 | 5804 | 5816 | 13 | Salvia miltiorrhiza chloroplast |
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| 45 | NC_020438 | AACA | 3 | 35966 | 35976 | 11 | Gonium pectorale chloroplast |
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| 46 | NC_020438 | AACA | 3 | 58521 | 58531 | 11 | Gonium pectorale chloroplast |
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| 47 | NC_020607 | AACA | 3 | 23612 | 23622 | 11 | Artemisia frigida chloroplast |
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| 48 | NC_021121 | AACA | 3 | 118607 | 118618 | 12 | Ardisia polysticta chloroplast |
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| 49 | NC_021438 | AACA | 3 | 47927 | 47937 | 11 | Gnetum montanum chloroplast |
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| 50 | NC_021441 | AACA | 3 | 109525 | 109536 | 12 | Taiwania flousiana chloroplast |
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| 51 | NC_021455 | AACA | 3 | 5150 | 5161 | 12 | Prinsepia utilis plastid |
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| 52 | NC_000926 | AACA | 3 | 9070 | 9081 | 12 | Guillardia theta chloroplast |
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| 53 | NC_001319 | AACA | 3 | 14579 | 14589 | 11 | Marchantia polymorpha chloroplast |
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| 54 | NC_001319 | AACA | 3 | 30510 | 30521 | 12 | Marchantia polymorpha chloroplast |
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| 55 | NC_001320 | AACA | 3 | 44666 | 44676 | 11 | Oryza sativa Japonica Group plastid |
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| 56 | NC_001840 | AACA | 3 | 114374 | 114384 | 11 | Cyanidium caldarium chloroplast |
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| 57 | NC_001840 | AACA | 3 | 143355 | 143366 | 12 | Cyanidium caldarium chloroplast |
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| 58 | NC_001865 | AACA | 3 | 131805 | 131815 | 11 | Chlorella vulgaris chloroplast |
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| 59 | NC_002694 | AACA | 3 | 65441 | 65452 | 12 | Lotus japonicus chloroplast |
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| 60 | NC_004561 | AACA | 3 | 43934 | 43945 | 12 | Atropa belladonna chloroplast |
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| 61 | NC_005973 | AACA | 3 | 44590 | 44600 | 11 | Oryza nivara chloroplast |
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| 62 | NC_006137 | AACA | 3 | 8941 | 8951 | 11 | Gracilaria tenuistipitata var. liui chloroplast |
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| 63 | NC_007578 | AACA | 3 | 23889 | 23899 | 11 | Lactuca sativa chloroplast |
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| 64 | NC_007758 | AACA | 3 | 12926 | 12937 | 12 | Theileria parva strain Muguga apicoplast |
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| 65 | NC_007758 | AACA | 3 | 15636 | 15647 | 12 | Theileria parva strain Muguga apicoplast |
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| 66 | NC_007898 | AACA | 3 | 45425 | 45436 | 12 | Solanum lycopersicum chloroplast |
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| 67 | NC_007932 | AACA | 3 | 129631 | 129642 | 12 | Porphyra yezoensis chloroplast |
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| 68 | NC_007944 | AACA | 3 | 131275 | 131286 | 12 | Gossypium hirsutum chloroplast |
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| 69 | NC_007977 | AACA | 3 | 23978 | 23988 | 11 | Helianthus annuus chloroplast |
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| 70 | NC_008097 | AACA | 3 | 75109 | 75120 | 12 | Chara vulgaris chloroplast |
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| 71 | NC_008099 | AACA | 3 | 72755 | 72766 | 12 | Oltmannsiellopsis viridis chloroplast |
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| 72 | NC_008114 | AACA | 3 | 145304 | 145315 | 12 | Pseudendoclonium akinetum chloroplast |
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| 73 | NC_008117 | AACA | 3 | 73012 | 73023 | 12 | Zygnema circumcarinatum chloroplast |
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| 74 | NC_008155 | AACA | 3 | 44617 | 44627 | 11 | Oryza sativa Indica Group chloroplast |
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| 75 | NC_008289 | AACA | 3 | 40535 | 40546 | 12 | Ostreococcus tauri chloroplast |
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| 76 | NC_008325 | AACA | 3 | 113376 | 113387 | 12 | Daucus carota chloroplast |
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| 77 | NC_008336 | AACA | 3 | 33249 | 33259 | 11 | Nandina domestica chloroplast |
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| 78 | NC_008457 | AACA | 3 | 33899 | 33909 | 11 | Piper cenocladum chloroplast |
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| 79 | NC_008796 | AACA | 3 | 51763 | 51775 | 13 | Ranunculus macranthus chloroplast |
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| 80 | NC_008822 | AACA | 3 | 80318 | 80329 | 12 | Chlorokybus atmophyticus chloroplast |
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| 81 | NC_008822 | AACA | 3 | 135382 | 135393 | 12 | Chlorokybus atmophyticus chloroplast |
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| 82 | NC_009598 | AACA | 3 | 33639 | 33649 | 11 | Chloranthus spicatus chloroplast |
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| 83 | NC_009599 | AACA | 3 | 4316 | 4326 | 11 | Buxus microphylla chloroplast |
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| 84 | NC_009601 | AACA | 3 | 27930 | 27940 | 11 | Dioscorea elephantipes chloroplast |
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| 85 | NC_010601 | AACA | 3 | 23760 | 23770 | 11 | Guizotia abyssinica chloroplast |
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| 86 | NC_010654 | AACA | 3 | 21779 | 21790 | 12 | Welwitschia mirabilis chloroplast |
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| 87 | NC_010776 | AACA | 3 | 69076 | 69087 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
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| 88 | NC_012898 | AACA | 3 | 57340 | 57351 | 12 | Aureococcus anophagefferens chloroplast |
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| 89 | NC_013553 | AACA | 3 | 23822 | 23832 | 11 | Parthenium argentatum chloroplast |
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| 90 | NC_013703 | AACA | 3 | 58064 | 58075 | 12 | Cryptomonas paramecium plastid |
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