Chloroplast Motifs - Perfect (TTTC) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_022136 | (TTTC)3 | p4 | 12 | 63544 | 63555 | Lygodium japonicum chloroplast |
2 | NC_022136 | (TTTC)3 | p4 | 12 | 89550 | 89561 | Lygodium japonicum chloroplast |
3 | NC_021449 | (TTTC)3 | p4 | 12 | 79919 | 79930 | Utricularia gibba chloroplast |
4 | NC_021441 | (TTTC)3 | p4 | 12 | 54621 | 54632 | Taiwania flousiana chloroplast |
5 | NC_021437 | (TTTC)3 | p4 | 12 | 113932 | 113943 | Cunninghamia lanceolata chloroplast |
6 | NC_021372 | (TTTC)3 | p4 | 12 | 38307 | 38318 | Pharus latifolius chloroplast |
7 | NC_021110 | (TTTC)3 | p4 | 12 | 101306 | 101317 | Cephalotaxus oliveri chloroplast |
8 | NC_021102 | (TTTC)3 | p4 | 12 | 73340 | 73351 | Pachycladon cheesemanii chloroplast |
9 | NC_020607 | (TTTC)4 | p4 | 16 | 80912 | 80927 | Artemisia frigida chloroplast |
10 | NC_020320 | (TTTC)4 | p4 | 16 | 80910 | 80925 | Chrysanthemum indicum voucher HeN001 chloroplast |
11 | NC_020092 | (TTTC)4 | p4 | 16 | 80951 | 80966 | Chrysanthemum x morifolium chloroplast |
12 | NC_020019 | (TTTC)3 | p4 | 12 | 45288 | 45299 | Camellia sinensis chloroplast |
13 | NC_019616 | (TTTC)3 | p4 | 12 | 153609 | 153620 | Vaccinium macrocarpon plastid |
14 | NC_018565 | (TTTC)3 | p4 | 12 | 73725 | 73736 | Pachycladon enysii chloroplast |
15 | NC_017894 | (TTTC)3 | p4 | 12 | 123125 | 123136 | Gossypium gossypioides chloroplast |
16 | NC_017006 | (TTTC)3 | p4 | 12 | 22633 | 22644 | Mankyua chejuensis chloroplast |
17 | NC_016736 | (TTTC)3 | p4 | 12 | 80436 | 80447 | Ricinus communis chloroplast |
18 | NC_016730 | (TTTC)3 | p4 | 12 | 73678 | 73689 | Silene latifolia chloroplast |
19 | NC_016729 | (TTTC)3 | p4 | 12 | 70381 | 70392 | Silene conica chloroplast |
20 | NC_016728 | (TTTC)3 | p4 | 12 | 27091 | 27102 | Silene noctiflora chloroplast |
21 | NC_016728 | (TTTC)3 | p4 | 12 | 70386 | 70397 | Silene noctiflora chloroplast |
22 | NC_016727 | (TTTC)3 | p4 | 12 | 73224 | 73235 | Silene vulgaris chloroplast |
23 | NC_016065 | (TTTC)3 | p4 | 12 | 54601 | 54612 | Taiwania cryptomerioides chloroplast DNA |
24 | NC_016063 | (TTTC)3 | p4 | 12 | 102371 | 102382 | Cephalotaxus wilsoniana chloroplast DNA |
25 | NC_015983 | (TTTC)3 | p4 | 12 | 32791 | 32802 | Cucumis melo subsp. melo chloroplast |
26 | NC_015899 | (TTTC)3 | p4 | 12 | 47072 | 47083 | Wolffia australiana chloroplast |
27 | NC_015891 | (TTTC)3 | p4 | 12 | 48029 | 48040 | Spirodela polyrhiza chloroplast |
28 | NC_015621 | (TTTC)3 | p4 | 12 | 82638 | 82649 | Ageratina adenophora chloroplast |
29 | NC_015543 | (TTTC)3 | p4 | 12 | 81009 | 81020 | Jacobaea vulgaris chloroplast |
30 | NC_015308 | (TTTC)3 | p4 | 12 | 26731 | 26742 | Hevea brasiliensis chloroplast |
31 | NC_015308 | (TTTC)3 | p4 | 12 | 87344 | 87355 | Hevea brasiliensis chloroplast |
32 | NC_014874 | (TTTC)3 | p4 | 12 | 30150 | 30161 | Rhizanthella gardneri plastid |
33 | NC_014697 | (TTTC)3 | p4 | 12 | 44739 | 44750 | Prunus persica chloroplast |
34 | NC_014570 | (TTTC)4 | p4 | 16 | 79455 | 79470 | Eucalyptus grandis chloroplast |
35 | NC_014570 | (TTTC)3 | p4 | 12 | 86986 | 86997 | Eucalyptus grandis chloroplast |
36 | NC_014346 | (TTTC)3 | p4 | 12 | 257144 | 257155 | Floydiella terrestris chloroplast |
37 | NC_014063 | (TTTC)3 | p4 | 12 | 20870 | 20881 | Lathyrus sativus chloroplast |
38 | NC_014063 | (TTTC)3 | p4 | 12 | 20870 | 20881 | Lathyrus sativus chloroplast |
39 | NC_014056 | (TTTC)3 | p4 | 12 | 86933 | 86944 | Oncidium Gower Ramsey chloroplast |
40 | NC_014056 | (TTTC)3 | p4 | 12 | 86933 | 86944 | Oncidium Gower Ramsey chloroplast |
41 | NC_013703 | (TTTC)3 | p4 | 12 | 31136 | 31147 | Cryptomonas paramecium plastid |
42 | NC_013703 | (TTTC)3 | p4 | 12 | 31136 | 31147 | Cryptomonas paramecium plastid |
43 | NC_013553 | (TTTC)3 | p4 | 12 | 82818 | 82829 | Parthenium argentatum chloroplast |
44 | NC_012818 | (TTTC)3 | p4 | 12 | 134759 | 134770 | Alsophila spinulosa chloroplast |
45 | NC_012615 | (TTTC)3 | p4 | 12 | 86493 | 86504 | Megaleranthis saniculifolia chloroplast |
46 | NC_012224 | (TTTC)3 | p4 | 12 | 81295 | 81306 | Jatropha curcas chloroplast |
47 | NC_010654 | (TTTC)3 | p4 | 12 | 48784 | 48795 | Welwitschia mirabilis chloroplast |
48 | NC_010601 | (TTTC)3 | p4 | 12 | 81756 | 81767 | Guizotia abyssinica chloroplast |
49 | NC_010548 | (TTTC)3 | p4 | 12 | 96322 | 96333 | Cryptomeria japonica chloroplast |
50 | NC_010433 | (TTTC)3 | p4 | 12 | 87481 | 87492 | Manihot esculenta chloroplast |
51 | NC_010362 | (TTTC)3 | p4 | 12 | 130446 | 130457 | Oenothera parviflora chloroplast |
52 | NC_010361 | (TTTC)3 | p4 | 12 | 131704 | 131715 | Oenothera biennis chloroplast |
53 | NC_010360 | (TTTC)3 | p4 | 12 | 132189 | 132200 | Oenothera glazioviana chloroplast |
54 | NC_010358 | (TTTC)3 | p4 | 12 | 131645 | 131656 | Oenothera argillicola chloroplast |
55 | NC_010323 | (TTTC)3 | p4 | 12 | 79356 | 79367 | Carica papaya chloroplast |
56 | NC_010109 | (TTTC)3 | p4 | 12 | 46572 | 46583 | Lemna minor chloroplast |
57 | NC_009808 | (TTTC)3 | p4 | 12 | 71415 | 71426 | Ipomoea purpurea chloroplast |
58 | NC_009598 | (TTTC)3 | p4 | 12 | 50196 | 50207 | Chloranthus spicatus chloroplast |
59 | NC_009273 | (TTTC)3 | p4 | 12 | 73887 | 73898 | Lepidium virginicum chloroplast |
60 | NC_009271 | (TTTC)4 | p4 | 16 | 82259 | 82274 | Crucihimalaya wallichii chloroplast |
61 | NC_009268 | (TTTC)3 | p4 | 12 | 34467 | 34478 | Arabis hirsuta chloroplast |
62 | NC_009267 | (TTTC)3 | p4 | 12 | 73701 | 73712 | Olimarabidopsis pumila chloroplast |
63 | NC_009143 | (TTTC)3 | p4 | 12 | 75809 | 75820 | Populus trichocarpa chloroplast |
64 | NC_008796 | (TTTC)3 | p4 | 12 | 82601 | 82612 | Ranunculus macranthus chloroplast |
65 | NC_008456 | (TTTC)3 | p4 | 12 | 82162 | 82173 | Drimys granadensis chloroplast |
66 | NC_008407 | (TTTC)3 | p4 | 12 | 90889 | 90900 | Jasminum nudiflorum chloroplast |
67 | NC_008372 | (TTTC)3 | p4 | 12 | 194244 | 194255 | Stigeoclonium helveticum chloroplast |
68 | NC_008334 | (TTTC)3 | p4 | 12 | 14886 | 14897 | Citrus sinensis chloroplast |
69 | NC_008235 | (TTTC)3 | p4 | 12 | 75339 | 75350 | Populus alba chloroplast |
70 | NC_008115 | (TTTC)3 | p4 | 12 | 87120 | 87131 | Eucalyptus globulus subsp. globulus chloroplast |
71 | NC_008101 | (TTTC)3 | p4 | 12 | 112413 | 112424 | Scenedesmus obliquus chloroplast |
72 | NC_007977 | (TTTC)3 | p4 | 12 | 81743 | 81754 | Helianthus annuus chloroplast |
73 | NC_007578 | (TTTC)3 | p4 | 12 | 82282 | 82293 | Lactuca sativa chloroplast |
74 | NC_007500 | (TTTC)3 | p4 | 12 | 4106 | 4117 | Nicotiana sylvestris chloroplast |
75 | NC_002693 | (TTTC)3 | p4 | 12 | 132185 | 132196 | Oenothera elata subsp. hookeri plastid plastome I |
76 | NC_002202 | (TTTC)3 | p4 | 12 | 73471 | 73482 | Spinacia oleracea plastid |
77 | NC_001879 | (TTTC)3 | p4 | 12 | 4106 | 4117 | Nicotiana tabacum plastid |
78 | NC_001865 | (TTTC)3 | p4 | 12 | 28559 | 28570 | Chlorella vulgaris chloroplast |
79 | NC_001840 | (TTTC)3 | p4 | 12 | 23644 | 23655 | Cyanidium caldarium chloroplast |