Chloroplast Motifs - Perfect (TTCT) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_022135 | (TTCT)3 | p4 | 12 | 63341 | 63352 | Aegilops speltoides isolate SPE0661 chloroplast |
2 | NC_022133 | (TTCT)3 | p4 | 12 | 63652 | 63663 | Aegilops tauschii chloroplast |
3 | NC_021762 | (TTCT)3 | p4 | 12 | 64508 | 64519 | Triticum urartu chloroplast |
4 | NC_021761 | (TTCT)3 | p4 | 12 | 64587 | 64598 | Secale cereale chloroplast |
5 | NC_021760 | (TTCT)3 | p4 | 12 | 64829 | 64840 | Triticum monococcum chloroplast |
6 | NC_021433 | (TTCT)3 | p4 | 12 | 14003 | 14014 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
7 | NC_021432 | (TTCT)3 | p4 | 12 | 13885 | 13896 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
8 | NC_021431 | (TTCT)3 | p4 | 12 | 14125 | 14136 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
9 | NC_021430 | (TTCT)3 | p4 | 12 | 14051 | 14062 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
10 | NC_021429 | (TTCT)3 | p4 | 12 | 14077 | 14088 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
11 | NC_021372 | (TTCT)3 | p4 | 12 | 81572 | 81583 | Pharus latifolius chloroplast |
12 | NC_021121 | (TTCT)4 | p4 | 16 | 65070 | 65085 | Ardisia polysticta chloroplast |
13 | NC_020371 | (TTCT)3 | p4 | 12 | 33880 | 33891 | Pavlova lutheri chloroplast |
14 | NC_020363 | (TTCT)3 | p4 | 12 | 44734 | 44745 | Zingiber spectabile plastid |
15 | NC_020321 | (TTCT)3 | p4 | 12 | 122919 | 122930 | Taxus mairei voucher NN014 chloroplast |
16 | NC_019616 | (TTCT)3 | p4 | 12 | 26977 | 26988 | Vaccinium macrocarpon plastid |
17 | NC_019616 | (TTCT)3 | p4 | 12 | 61193 | 61204 | Vaccinium macrocarpon plastid |
18 | NC_018523 | (TTCT)3 | p4 | 12 | 78900 | 78911 | Saccharina japonica chloroplast |
19 | NC_018117 | (TTCT)3 | p4 | 12 | 84507 | 84518 | Datura stramonium chloroplast |
20 | NC_016753 | (TTCT)3 | p4 | 12 | 49856 | 49867 | Colocasia esculenta chloroplast |
21 | NC_016734 | (TTCT)3 | p4 | 12 | 119419 | 119430 | Brassica napus chloroplast |
22 | NC_016708 | (TTCT)3 | p4 | 12 | 64079 | 64090 | Millettia pinnata chloroplast |
23 | NC_016468 | (TTCT)4 | p4 | 16 | 125466 | 125481 | Boea hygrometrica chloroplast |
24 | NC_015830 | (TTCT)3 | p4 | 12 | 81273 | 81284 | Bambusa emeiensis chloroplast |
25 | NC_015139 | (TTCT)3 | p4 | 12 | 34369 | 34380 | Brassica rapa subsp. pekinensis chloroplast |
26 | NC_014346 | (TTCT)3 | p4 | 12 | 253147 | 253158 | Floydiella terrestris chloroplast |
27 | NC_014062 | (TTCT)3 | p4 | 12 | 80542 | 80553 | Anomochloa marantoidea chloroplast |
28 | NC_014062 | (TTCT)3 | p4 | 12 | 15019 | 15030 | Anomochloa marantoidea chloroplast |
29 | NC_014062 | (TTCT)3 | p4 | 12 | 15019 | 15030 | Anomochloa marantoidea chloroplast |
30 | NC_014062 | (TTCT)3 | p4 | 12 | 80542 | 80553 | Anomochloa marantoidea chloroplast |
31 | NC_013823 | (TTCT)3 | p4 | 12 | 87602 | 87613 | Typha latifolia chloroplast |
32 | NC_013823 | (TTCT)3 | p4 | 12 | 87602 | 87613 | Typha latifolia chloroplast |
33 | NC_012927 | (TTCT)3 | p4 | 12 | 81171 | 81182 | Bambusa oldhamii chloroplast |
34 | NC_011087 | (TTCT)3 | p4 | 12 | 765778 | 765789 | Paulinella chromatophora chromatophore |
35 | NC_010601 | (TTCT)3 | p4 | 12 | 62703 | 62714 | Guizotia abyssinica chloroplast |
36 | NC_010442 | (TTCT)3 | p4 | 12 | 8575 | 8586 | Trachelium caeruleum chloroplast |
37 | NC_010362 | (TTCT)3 | p4 | 12 | 85845 | 85856 | Oenothera parviflora chloroplast |
38 | NC_010361 | (TTCT)3 | p4 | 12 | 87081 | 87092 | Oenothera biennis chloroplast |
39 | NC_010360 | (TTCT)3 | p4 | 12 | 87708 | 87719 | Oenothera glazioviana chloroplast |
40 | NC_010358 | (TTCT)3 | p4 | 12 | 86627 | 86638 | Oenothera argillicola chloroplast |
41 | NC_009618 | (TTCT)3 | p4 | 12 | 70873 | 70884 | Cycas taitungensis chloroplast |
42 | NC_009600 | (TTCT)3 | p4 | 12 | 86279 | 86290 | Illicium oligandrum chloroplast |
43 | NC_008829 | (TTCT)3 | p4 | 12 | 124504 | 124515 | Angiopteris evecta chloroplast |
44 | NC_008796 | (TTCT)3 | p4 | 12 | 127724 | 127735 | Ranunculus macranthus chloroplast |
45 | NC_008372 | (TTCT)3 | p4 | 12 | 152346 | 152357 | Stigeoclonium helveticum chloroplast |
46 | NC_008335 | (TTCT)3 | p4 | 12 | 47645 | 47656 | Platanus occidentalis chloroplast |
47 | NC_008117 | (TTCT)8 | p4 | 32 | 68724 | 68755 | Zygnema circumcarinatum chloroplast |
48 | NC_007758 | (TTCT)3 | p4 | 12 | 38477 | 38488 | Theileria parva strain Muguga apicoplast |
49 | NC_007758 | (TTCT)3 | p4 | 12 | 38044 | 38055 | Theileria parva strain Muguga apicoplast |
50 | NC_007758 | (TTCT)3 | p4 | 12 | 37183 | 37194 | Theileria parva strain Muguga apicoplast |
51 | NC_007758 | (TTCT)3 | p4 | 12 | 36753 | 36764 | Theileria parva strain Muguga apicoplast |
52 | NC_004993 | (TTCT)3 | p4 | 12 | 126886 | 126897 | Calycanthus floridus var. glaucus chloroplast |
53 | NC_004766 | (TTCT)3 | p4 | 12 | 81587 | 81598 | Adiantum capillus-veneris chloroplast |
54 | NC_004561 | (TTCT)3 | p4 | 12 | 5456 | 5467 | Atropa belladonna chloroplast |
55 | NC_003386 | (TTCT)3 | p4 | 12 | 138423 | 138434 | Psilotum nudum chloroplast |
56 | NC_003386 | (TTCT)3 | p4 | 12 | 120302 | 120313 | Psilotum nudum chloroplast |
57 | NC_002762 | (TTCT)3 | p4 | 12 | 64227 | 64238 | Triticum aestivum chloroplast |
58 | NC_002693 | (TTCT)3 | p4 | 12 | 87459 | 87470 | Oenothera elata subsp. hookeri plastid plastome I |