Chloroplast Motifs - Perfect (TTAT) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_021441 | (TTAT)4 | p4 | 16 | 130282 | 130297 | Taiwania flousiana chloroplast |
2 | NC_021437 | (TTAT)3 | p4 | 12 | 94306 | 94317 | Cunninghamia lanceolata chloroplast |
3 | NC_021431 | (TTAT)3 | p4 | 12 | 55769 | 55780 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
4 | NC_021430 | (TTAT)3 | p4 | 12 | 55666 | 55677 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
5 | NC_020795 | (TTAT)3 | p4 | 12 | 44004 | 44015 | Chondrus crispus plastid complete genome |
6 | NC_020460 | (TTAT)3 | p4 | 12 | 50897 | 50908 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
7 | NC_020365 | (TTAT)3 | p4 | 12 | 83818 | 83829 | Calamus caryotoides plastid |
8 | NC_020018 | (TTAT)3 | p4 | 12 | 15693 | 15704 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
9 | NC_020018 | (TTAT)3 | p4 | 12 | 43936 | 43947 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
10 | NC_019628 | (TTAT)3 | p4 | 12 | 17490 | 17501 | Pellia endiviifolia chloroplast |
11 | NC_018117 | (TTAT)3 | p4 | 12 | 14647 | 14658 | Datura stramonium chloroplast |
12 | NC_017609 | (TTAT)3 | p4 | 12 | 55782 | 55793 | Phalaenopsis equestris chloroplast |
13 | NC_016753 | (TTAT)3 | p4 | 12 | 14361 | 14372 | Colocasia esculenta chloroplast |
14 | NC_016732 | (TTAT)3 | p4 | 12 | 214347 | 214358 | Dunaliella salina chloroplast |
15 | NC_016068 | (TTAT)3 | p4 | 12 | 33999 | 34010 | Nicotiana undulata chloroplast |
16 | NC_016065 | (TTAT)3 | p4 | 12 | 131461 | 131472 | Taiwania cryptomerioides chloroplast DNA |
17 | NC_015899 | (TTAT)3 | p4 | 12 | 132782 | 132793 | Wolffia australiana chloroplast |
18 | NC_015891 | (TTAT)3 | p4 | 12 | 66 | 77 | Spirodela polyrhiza chloroplast |
19 | NC_015891 | (TTAT)3 | p4 | 12 | 60773 | 60784 | Spirodela polyrhiza chloroplast |
20 | NC_015605 | (TTAT)3 | p4 | 12 | 106789 | 106800 | Nelumbo lutea chloroplast |
21 | NC_015083 | (TTAT)3 | p4 | 12 | 31921 | 31932 | Erodium carvifolium chloroplast |
22 | NC_014808 | (TTAT)3 | p4 | 12 | 27591 | 27602 | Thalassiosira oceanica CCMP1005 chloroplast |
23 | NC_014340 | (TTAT)3 | p4 | 12 | 106124 | 106135 | Chromera velia strain CCMP2878 chloroplast |
24 | NC_014287 | (TTAT)3 | p4 | 12 | 111214 | 111225 | Durinskia baltica chloroplast |
25 | NC_013823 | (TTAT)3 | p4 | 12 | 63337 | 63348 | Typha latifolia chloroplast |
26 | NC_013823 | (TTAT)3 | p4 | 12 | 63337 | 63348 | Typha latifolia chloroplast |
27 | NC_012903 | (TTAT)3 | p4 | 12 | 94217 | 94228 | Aureoumbra lagunensis chloroplast |
28 | NC_012903 | (TTAT)3 | p4 | 12 | 20399 | 20410 | Aureoumbra lagunensis chloroplast |
29 | NC_012099 | (TTAT)3 | p4 | 12 | 8699 | 8710 | Pyramimonas parkeae chloroplast |
30 | NC_010772 | (TTAT)3 | p4 | 12 | 134708 | 134719 | Heterosigma akashiwo chloroplast |
31 | NC_010772 | (TTAT)3 | p4 | 12 | 78484 | 78495 | Heterosigma akashiwo chloroplast |
32 | NC_010772 | (TTAT)3 | p4 | 12 | 24599 | 24610 | Heterosigma akashiwo chloroplast |
33 | NC_010323 | (TTAT)3 | p4 | 12 | 103861 | 103872 | Carica papaya chloroplast |
34 | NC_009681 | (TTAT)3 | p4 | 12 | 170306 | 170317 | Leptosira terrestris chloroplast |
35 | NC_009599 | (TTAT)3 | p4 | 12 | 103160 | 103171 | Buxus microphylla chloroplast |
36 | NC_009271 | (TTAT)3 | p4 | 12 | 12048 | 12059 | Crucihimalaya wallichii chloroplast |
37 | NC_009143 | (TTAT)3 | p4 | 12 | 100638 | 100649 | Populus trichocarpa chloroplast |
38 | NC_008822 | (TTAT)3 | p4 | 12 | 128466 | 128477 | Chlorokybus atmophyticus chloroplast |
39 | NC_008788 | (TTAT)3 | p4 | 12 | 68749 | 68760 | Nuphar advena chloroplast |
40 | NC_008591 | (TTAT)3 | p4 | 12 | 11628 | 11639 | Agrostis stolonifera chloroplast |
41 | NC_008408 | (TTAT)3 | p4 | 12 | 68053 | 68064 | Bigelowiella natans plastid |
42 | NC_008372 | (TTAT)3 | p4 | 12 | 125932 | 125943 | Stigeoclonium helveticum chloroplast |
43 | NC_008372 | (TTAT)3 | p4 | 12 | 37803 | 37814 | Stigeoclonium helveticum chloroplast |
44 | NC_008116 | (TTAT)3 | p4 | 12 | 141667 | 141678 | Staurastrum punctulatum chloroplast |
45 | NC_008114 | (TTAT)3 | p4 | 12 | 59880 | 59891 | Pseudendoclonium akinetum chloroplast |
46 | NC_008099 | (TTAT)3 | p4 | 12 | 151085 | 151096 | Oltmannsiellopsis viridis chloroplast |
47 | NC_008097 | (TTAT)3 | p4 | 12 | 100364 | 100375 | Chara vulgaris chloroplast |
48 | NC_008097 | (TTAT)3 | p4 | 12 | 99775 | 99786 | Chara vulgaris chloroplast |
49 | NC_008097 | (TTAT)3 | p4 | 12 | 87443 | 87454 | Chara vulgaris chloroplast |
50 | NC_008096 | (TTAT)3 | p4 | 12 | 14549 | 14560 | Solanum tuberosum chloroplast |
51 | NC_007957 | (TTAT)3 | p4 | 12 | 104182 | 104193 | Vitis vinifera chloroplast |
52 | NC_007943 | (TTAT)3 | p4 | 12 | 14433 | 14444 | Solanum bulbocastanum chloroplast |
53 | NC_007898 | (TTAT)3 | p4 | 12 | 14406 | 14417 | Solanum lycopersicum chloroplast |
54 | NC_007602 | (TTAT)3 | p4 | 12 | 33939 | 33950 | Nicotiana tomentosiformis chloroplast |
55 | NC_006861 | (TTAT)3 | p4 | 12 | 98318 | 98329 | Huperzia lucidula chloroplast |
56 | NC_005087 | (TTAT)3 | p4 | 12 | 78455 | 78466 | Physcomitrella patens subsp. patens chloroplast |
57 | NC_005086 | (TTAT)3 | p4 | 12 | 120036 | 120047 | Amborella trichopoda chloroplast |
58 | NC_004115 | (TTAT)3 | p4 | 12 | 68985 | 68996 | Chaetosphaeridium globosum chloroplast |
59 | NC_002652 | (TTAT)4 | p4 | 16 | 1695 | 1710 | Euglena longa plastid |
60 | NC_002652 | (TTAT)3 | p4 | 12 | 70725 | 70736 | Euglena longa plastid |
61 | NC_002652 | (TTAT)3 | p4 | 12 | 30121 | 30132 | Euglena longa plastid |
62 | NC_001603 | (TTAT)3 | p4 | 12 | 114264 | 114275 | Euglena gracilis chloroplast |
63 | NC_001603 | (TTAT)3 | p4 | 12 | 63633 | 63644 | Euglena gracilis chloroplast |