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ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (TAA) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_021426(TAA)4p312130694130705Trochodendron aralioides chloroplast
2NC_021425(TAA)4p312129273129284Tetracentron sinense chloroplast
3NC_021189(TAA)4p312133669133680Pyropia haitanensis voucher PH-38 chloroplast
4NC_021109(TAA)4p312165443165454Pleodorina starrii plastid
5NC_021109(TAA)4p312231124231135Pleodorina starrii plastid
6NC_021075(TAA)4p3122071220723Calliarthron tuberculosum chloroplast
7NC_020460(TAA)4p3121606016071Euglena viridis culture-collection ATCC:PRA110 chloroplast
8NC_020438(TAA)4p312145362145373Gonium pectorale chloroplast
9NC_020371(TAA)4p3121233112342Pavlova lutheri chloroplast
10NC_020363(TAA)4p312115378115389Zingiber spectabile plastid
11NC_020362(TAA)4p3121706817079Heliconia collinsiana plastid
12NC_020320(TAA)5p3155856358577Chrysanthemum indicum voucher HeN001 chloroplast
13NC_020152(TAA)4p3123594235953Quercus rubra plastid
14NC_020018(TAA)4p3123281732828Monomorphina aenigmatica strain UTEX1284 chloroplast
15NC_020018(TAA)4p3123620336214Monomorphina aenigmatica strain UTEX1284 chloroplast
16NC_020018(TAA)4p3124861048621Monomorphina aenigmatica strain UTEX1284 chloroplast
17NC_020018(TAA)4p3125073950750Monomorphina aenigmatica strain UTEX1284 chloroplast
18NC_020014(TAA)4p3129760897619Nannochloropsis gaditana chloroplast
19NC_018114(TAA)4p3124620846219Erycina pusilla chloroplast
20NC_018113(TAA)4p31240874098Gossypium robinsonii chloroplast
21NC_018113(TAA)4p312134247134258Gossypium robinsonii chloroplast
22NC_018051(TAA)4p31280368047Vigna unguiculata chloroplast
23NC_016735(TAA)4p3121812918140Fucus vesiculosus chloroplast
24NC_016732(TAA)4p3126742967440Dunaliella salina chloroplast
25NC_016732(TAA)4p3128510485115Dunaliella salina chloroplast
26NC_016731(TAA)4p3125179451805Synedra acus chloroplast
27NC_016729(TAA)4p3125304953060Silene conica chloroplast
28NC_016729(TAA)4p312126406126417Silene conica chloroplast
29NC_016468(TAA)4p312120067120078Boea hygrometrica chloroplast
30NC_016069(TAA)4p3123037630387Picea morrisonicola chloroplast
31NC_016065(TAA)4p3126819468205Taiwania cryptomerioides chloroplast DNA
32NC_016058(TAA)4p3121362113632Larix decidua chloroplast
33NC_015983(TAA)4p31245824593Cucumis melo subsp. melo chloroplast
34NC_015899(TAA)4p3121707217083Wolffia australiana chloroplast
35NC_015899(TAA)4p3123284432855Wolffia australiana chloroplast
36NC_015891(TAA)4p3121786717878Spirodela polyrhiza chloroplast
37NC_015645(TAA)4p3125113651147Schizomeris leibleinii chloroplast
38NC_015645(TAA)4p312136148136159Schizomeris leibleinii chloroplast
39NC_015645(TAA)4p312141545141556Schizomeris leibleinii chloroplast
40NC_015621(TAA)4p3125888458895Ageratina adenophora chloroplast
41NC_015543(TAA)4p3123177831789Jacobaea vulgaris chloroplast
42NC_015402(TAA)4p3126849168502Ptilidium pulcherrimum chloroplast
43NC_015402(TAA)4p312102754102765Ptilidium pulcherrimum chloroplast
44NC_014874(TAA)4p3121055910570Rhizanthella gardneri plastid
45NC_014808(TAA)4p312123645123656Thalassiosira oceanica CCMP1005 chloroplast
46NC_014699(TAA)4p3123851838529Equisetum arvense chloroplast
47NC_014676(TAA)4p31267216732Theobroma cacao chloroplast
48NC_014675(TAA)5p3155094150955Isoetes flaccida chloroplast
49NC_014674(TAA)4p3123591235923Castanea mollissima chloroplast
50NC_014589(TAA)4p3129044390454Cathaya argyrophylla chloroplast
51NC_014582(TAA)4p312115607115618Monsonia speciosa plastid
52NC_014287(TAA)4p31218911902Durinskia baltica chloroplast
53NC_013843(TAA)4p31280608071 Vigna radiata chloroplast
54NC_013843(TAA)4p31280608071 Vigna radiata chloroplast
55NC_012903(TAA)4p3123152831539 Aureoumbra lagunensis chloroplast
56NC_012052(TAA)4p312110305110316 Syntrichia ruralis chloroplast
57NC_011600(TAA)4p3125889258903 Vaucheria litorea chloroplast
58NC_011600(TAA)4p3121146711478 Vaucheria litorea chloroplast
59NC_011087(TAA)4p312901262901273Paulinella chromatophora chromatophore
60NC_011087(TAA)5p315971193971207Paulinella chromatophora chromatophore
61NC_010772(TAA)4p312155611155622 Heterosigma akashiwo chloroplast
62NC_010433(TAA)4p3121078110792 Manihot esculenta chloroplast
63NC_010109(TAA)4p3121699117002 Lemna minor chloroplast
64NC_010093(TAA)4p312122976122987 Acorus americanus chloroplast
65NC_009963(TAA)4p3122879728808 Cuscuta exaltata chloroplast
66NC_009766(TAA)4p31284288439 Cuscuta reflexa chloroplast
67NC_009681(TAA)4p3127073370744 Leptosira terrestris chloroplast
68NC_009601(TAA)4p312126341126352 Dioscorea elephantipes chloroplast
69NC_008796(TAA)5p3156364463658 Ranunculus macranthus chloroplast
70NC_008590(TAA)4p3125079950810 Hordeum vulgare subsp. vulgare chloroplast
71NC_008535(TAA)4p3125589855909 Coffea arabica chloroplast
72NC_008408(TAA)4p3122741327424 Bigelowiella natans plastid
73NC_008335(TAA)4p312130990131001 Platanus occidentalis chloroplast
74NC_008334(TAA)4p3123076230773 Citrus sinensis chloroplast
75NC_008116(TAA)4p312152850152861 Staurastrum punctulatum chloroplast
76NC_008097(TAA)4p312180509180520 Chara vulgaris chloroplast
77NC_008097(TAA)4p31273137324 Chara vulgaris chloroplast
78NC_007932(TAA)5p315132577132591 Porphyra yezoensis chloroplast
79NC_007578(TAA)4p3125912559136 Lactuca sativa chloroplast
80NC_007407(TAA)4p312123306123317 Acorus calamus plastid
81NC_007144(TAA)4p3127430374314 Cucumis sativus chloroplast
82NC_006861(TAA)5p315138773138787 Huperzia lucidula chloroplast
83NC_006861(TAA)4p312122008122019 Huperzia lucidula chloroplast
84NC_004823(TAA)4p3121621716228 Eimeria tenella strain Penn State apicoplast
85NC_004823(TAA)4p3121608516096 Eimeria tenella strain Penn State apicoplast
86NC_004543(TAA)6p318129068129085 Anthoceros formosae chloroplast
87NC_002202(TAA)4p3125587755888 Spinacia oleracea plastid
88NC_002186(TAA)4p3125960459615 Mesostigma viride chloroplast
89NC_001675(TAA)5p3159063590649 Cyanophora paradoxa cyanelle
90NC_001675(TAA)4p312124496124507 Cyanophora paradoxa cyanelle
91NC_001603(TAA)5p3158250282516 Euglena gracilis chloroplast
92NC_001603(TAA)4p31234013412 Euglena gracilis chloroplast
93NC_001568(TAA)4p3121200512016 Epifagus virginiana chloroplast
94NC_001319(TAA)4p3125076050771 Marchantia polymorpha chloroplast
95NC_001319(TAA)4p31225102521 Marchantia polymorpha chloroplast