Chloroplast Motifs - Perfect (ATTT) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_022100 | (ATTT)3 | p4 | 12 | 39376 | 39387 | Medicago truncatula cultivar Borung plastid |
2 | NC_022100 | (ATTT)3 | p4 | 12 | 89936 | 89947 | Medicago truncatula cultivar Borung plastid |
3 | NC_022099 | (ATTT)3 | p4 | 12 | 39320 | 39331 | Medicago truncatula cultivar Jemalong 2HA plastid |
4 | NC_022099 | (ATTT)3 | p4 | 12 | 90137 | 90148 | Medicago truncatula cultivar Jemalong 2HA plastid |
5 | NC_021650 | (ATTT)3 | p4 | 12 | 71511 | 71522 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
6 | NC_021649 | (ATTT)3 | p4 | 12 | 71667 | 71678 | Glycine falcata voucher CSIRO:G1718 chloroplast |
7 | NC_021648 | (ATTT)3 | p4 | 12 | 71496 | 71507 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
8 | NC_021647 | (ATTT)3 | p4 | 12 | 71264 | 71275 | Glycine canescens voucher CSIRO:G1232 chloroplast |
9 | NC_021636 | (ATTT)3 | p4 | 12 | 71454 | 71465 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
10 | NC_021618 | (ATTT)3 | p4 | 12 | 126435 | 126446 | Grateloupia taiwanensis plastid |
11 | NC_021431 | (ATTT)3 | p4 | 12 | 47314 | 47325 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
12 | NC_021429 | (ATTT)3 | p4 | 12 | 7218 | 7229 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
13 | NC_020795 | (ATTT)3 | p4 | 12 | 169307 | 169318 | Chondrus crispus plastid complete genome |
14 | NC_020460 | (ATTT)3 | p4 | 12 | 25130 | 25141 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
15 | NC_020460 | (ATTT)3 | p4 | 12 | 52533 | 52544 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
16 | NC_020438 | (ATTT)3 | p4 | 12 | 41372 | 41383 | Gonium pectorale chloroplast |
17 | NC_020366 | (ATTT)3 | p4 | 12 | 47545 | 47556 | Bismarckia nobilis plastid |
18 | NC_020364 | (ATTT)3 | p4 | 12 | 6663 | 6674 | Pseudophoenix vinifera plastid |
19 | NC_020363 | (ATTT)3 | p4 | 12 | 33002 | 33013 | Zingiber spectabile plastid |
20 | NC_020363 | (ATTT)3 | p4 | 12 | 54508 | 54519 | Zingiber spectabile plastid |
21 | NC_019651 | (ATTT)3 | p4 | 12 | 79356 | 79367 | Lolium multiflorum plastid |
22 | NC_019650 | (ATTT)3 | p4 | 12 | 79443 | 79454 | Festuca pratensis plastid |
23 | NC_019616 | (ATTT)3 | p4 | 12 | 132888 | 132899 | Vaccinium macrocarpon plastid |
24 | NC_017006 | (ATTT)3 | p4 | 12 | 120733 | 120744 | Mankyua chejuensis chloroplast |
25 | NC_016921 | (ATTT)3 | p4 | 12 | 8805 | 8816 | Pentactina rupicola chloroplast |
26 | NC_016732 | (ATTT)3 | p4 | 12 | 47498 | 47509 | Dunaliella salina chloroplast |
27 | NC_016729 | (ATTT)3 | p4 | 12 | 56217 | 56228 | Silene conica chloroplast |
28 | NC_016703 | (ATTT)3 | p4 | 12 | 74732 | 74743 | Phaeocystis antarctica strain CCMP1374 plastid |
29 | NC_015983 | (ATTT)4 | p4 | 16 | 90252 | 90267 | Cucumis melo subsp. melo chloroplast |
30 | NC_015899 | (ATTT)3 | p4 | 12 | 66837 | 66848 | Wolffia australiana chloroplast |
31 | NC_015645 | (ATTT)3 | p4 | 12 | 63800 | 63811 | Schizomeris leibleinii chloroplast |
32 | NC_015543 | (ATTT)3 | p4 | 12 | 112365 | 112376 | Jacobaea vulgaris chloroplast |
33 | NC_015543 | (ATTT)3 | p4 | 12 | 117041 | 117052 | Jacobaea vulgaris chloroplast |
34 | NC_015403 | (ATTT)3 | p4 | 12 | 20266 | 20277 | Fistulifera sp. JPCC DA0580 chloroplast |
35 | NC_015403 | (ATTT)3 | p4 | 12 | 56411 | 56422 | Fistulifera sp. JPCC DA0580 chloroplast |
36 | NC_015402 | (ATTT)4 | p4 | 16 | 48748 | 48763 | Ptilidium pulcherrimum chloroplast |
37 | NC_015113 | (ATTT)3 | p4 | 12 | 42804 | 42815 | Anthriscus cerefolium chloroplast |
38 | NC_014808 | (ATTT)3 | p4 | 12 | 58043 | 58054 | Thalassiosira oceanica CCMP1005 chloroplast |
39 | NC_014063 | (ATTT)3 | p4 | 12 | 70653 | 70664 | Lathyrus sativus chloroplast |
40 | NC_014063 | (ATTT)3 | p4 | 12 | 70653 | 70664 | Lathyrus sativus chloroplast |
41 | NC_013498 | (ATTT)5 | p4 | 20 | 41258 | 41277 | Ectocarpus siliculosus chloroplast |
42 | NC_013359 | (ATTT)3 | p4 | 12 | 69424 | 69435 | Bryopsis hypnoides chloroplast |
43 | NC_012978 | (ATTT)3 | p4 | 12 | 71358 | 71369 | Parachlorella kessleri chloroplast |
44 | NC_012903 | (ATTT)3 | p4 | 12 | 55916 | 55927 | Aureoumbra lagunensis chloroplast |
45 | NC_011828 | (ATTT)3 | p4 | 12 | 41954 | 41965 | Trifolium subterraneum chloroplast |
46 | NC_011713 | (ATTT)3 | p4 | 12 | 80149 | 80160 | Festuca arundinacea chloroplast |
47 | NC_011600 | (ATTT)3 | p4 | 12 | 93896 | 93907 | Vaucheria litorea chloroplast |
48 | NC_011156 | (ATTT)3 | p4 | 12 | 101545 | 101556 | Pinus lambertiana chloroplast |
49 | NC_011155 | (ATTT)3 | p4 | 12 | 102093 | 102104 | Pinus krempfii chloroplast |
50 | NC_011087 | (ATTT)3 | p4 | 12 | 834611 | 834622 | Paulinella chromatophora chromatophore |
51 | NC_011031 | (ATTT)3 | p4 | 12 | 59461 | 59472 | Oedogonium cardiacum chloroplast |
52 | NC_011031 | (ATTT)3 | p4 | 12 | 21879 | 21890 | Oedogonium cardiacum chloroplast |
53 | NC_010772 | (ATTT)3 | p4 | 12 | 112047 | 112058 | Heterosigma akashiwo chloroplast |
54 | NC_010601 | (ATTT)3 | p4 | 12 | 69944 | 69955 | Guizotia abyssinica chloroplast |
55 | NC_009950 | (ATTT)3 | p4 | 12 | 79473 | 79484 | Lolium perenne chloroplast |
56 | NC_009949 | (ATTT)3 | p4 | 12 | 1558 | 1569 | Cuscuta obtusiflora chloroplast |
57 | NC_009808 | (ATTT)3 | p4 | 12 | 9458 | 9469 | Ipomoea purpurea chloroplast |
58 | NC_009765 | (ATTT)3 | p4 | 12 | 67399 | 67410 | Cuscuta gronovii chloroplast |
59 | NC_009600 | (ATTT)3 | p4 | 12 | 111850 | 111861 | Illicium oligandrum chloroplast |
60 | NC_009599 | (ATTT)3 | p4 | 12 | 124166 | 124177 | Buxus microphylla chloroplast |
61 | NC_009272 | (ATTT)3 | p4 | 12 | 63404 | 63415 | Draba nemorosa chloroplast |
62 | NC_009272 | (ATTT)3 | p4 | 12 | 41430 | 41441 | Draba nemorosa chloroplast |
63 | NC_009265 | (ATTT)3 | p4 | 12 | 58605 | 58616 | Aethionema cordifolium chloroplast |
64 | NC_008788 | (ATTT)3 | p4 | 12 | 70288 | 70299 | Nuphar advena chloroplast |
65 | NC_008589 | (ATTT)3 | p4 | 12 | 13825 | 13836 | Thalassiosira pseudonana chloroplast |
66 | NC_008588 | (ATTT)3 | p4 | 12 | 74972 | 74983 | Phaeodactylum tricornutum chloroplast |
67 | NC_008372 | (ATTT)4 | p4 | 16 | 16759 | 16774 | Stigeoclonium helveticum chloroplast |
68 | NC_008372 | (ATTT)3 | p4 | 12 | 215385 | 215396 | Stigeoclonium helveticum chloroplast |
69 | NC_008372 | (ATTT)3 | p4 | 12 | 206383 | 206394 | Stigeoclonium helveticum chloroplast |
70 | NC_008372 | (ATTT)3 | p4 | 12 | 206152 | 206163 | Stigeoclonium helveticum chloroplast |
71 | NC_008372 | (ATTT)3 | p4 | 12 | 193357 | 193368 | Stigeoclonium helveticum chloroplast |
72 | NC_008372 | (ATTT)3 | p4 | 12 | 183859 | 183870 | Stigeoclonium helveticum chloroplast |
73 | NC_008372 | (ATTT)3 | p4 | 12 | 177496 | 177507 | Stigeoclonium helveticum chloroplast |
74 | NC_008372 | (ATTT)3 | p4 | 12 | 172329 | 172340 | Stigeoclonium helveticum chloroplast |
75 | NC_008372 | (ATTT)3 | p4 | 12 | 171635 | 171646 | Stigeoclonium helveticum chloroplast |
76 | NC_008372 | (ATTT)3 | p4 | 12 | 159295 | 159306 | Stigeoclonium helveticum chloroplast |
77 | NC_008372 | (ATTT)3 | p4 | 12 | 158535 | 158546 | Stigeoclonium helveticum chloroplast |
78 | NC_008372 | (ATTT)3 | p4 | 12 | 149976 | 149987 | Stigeoclonium helveticum chloroplast |
79 | NC_008372 | (ATTT)3 | p4 | 12 | 149599 | 149610 | Stigeoclonium helveticum chloroplast |
80 | NC_008372 | (ATTT)3 | p4 | 12 | 123632 | 123643 | Stigeoclonium helveticum chloroplast |
81 | NC_008372 | (ATTT)3 | p4 | 12 | 118130 | 118141 | Stigeoclonium helveticum chloroplast |
82 | NC_008372 | (ATTT)3 | p4 | 12 | 46531 | 46542 | Stigeoclonium helveticum chloroplast |
83 | NC_008372 | (ATTT)3 | p4 | 12 | 29160 | 29171 | Stigeoclonium helveticum chloroplast |
84 | NC_008372 | (ATTT)3 | p4 | 12 | 21663 | 21674 | Stigeoclonium helveticum chloroplast |
85 | NC_008372 | (ATTT)3 | p4 | 12 | 18828 | 18839 | Stigeoclonium helveticum chloroplast |
86 | NC_008372 | (ATTT)3 | p4 | 12 | 9482 | 9493 | Stigeoclonium helveticum chloroplast |
87 | NC_008372 | (ATTT)3 | p4 | 12 | 8866 | 8877 | Stigeoclonium helveticum chloroplast |
88 | NC_008372 | (ATTT)3 | p4 | 12 | 8703 | 8714 | Stigeoclonium helveticum chloroplast |
89 | NC_008359 | (ATTT)3 | p4 | 12 | 61732 | 61743 | Morus indica chloroplast |
90 | NC_008359 | (ATTT)3 | p4 | 12 | 13957 | 13968 | Morus indica chloroplast |
91 | NC_008334 | (ATTT)5 | p4 | 20 | 117762 | 117781 | Citrus sinensis chloroplast |
92 | NC_008325 | (ATTT)3 | p4 | 12 | 42215 | 42226 | Daucus carota chloroplast |
93 | NC_008289 | (ATTT)3 | p4 | 12 | 49183 | 49194 | Ostreococcus tauri chloroplast |
94 | NC_008289 | (ATTT)3 | p4 | 12 | 7144 | 7155 | Ostreococcus tauri chloroplast |
95 | NC_008117 | (ATTT)3 | p4 | 12 | 132633 | 132644 | Zygnema circumcarinatum chloroplast |
96 | NC_008114 | (ATTT)3 | p4 | 12 | 163948 | 163959 | Pseudendoclonium akinetum chloroplast |
97 | NC_008097 | (ATTT)3 | p4 | 12 | 146240 | 146251 | Chara vulgaris chloroplast |
98 | NC_007144 | (ATTT)4 | p4 | 16 | 89715 | 89730 | Cucumis sativus chloroplast |
99 | NC_006290 | (ATTT)3 | p4 | 12 | 34071 | 34082 | Panax ginseng chloroplast |
100 | NC_006137 | (ATTT)3 | p4 | 12 | 39866 | 39877 | Gracilaria tenuistipitata var. liui chloroplast |
101 | NC_006050 | (ATTT)3 | p4 | 12 | 69860 | 69871 | Nymphaea alba chloroplast |
102 | NC_005087 | (ATTT)3 | p4 | 12 | 88840 | 88851 | Physcomitrella patens subsp. patens chloroplast |
103 | NC_005087 | (ATTT)3 | p4 | 12 | 33531 | 33542 | Physcomitrella patens subsp. patens chloroplast |
104 | NC_005086 | (ATTT)3 | p4 | 12 | 6605 | 6616 | Amborella trichopoda chloroplast |
105 | NC_004677 | (ATTT)3 | p4 | 12 | 101435 | 101446 | Pinus koraiensis chloroplast |
106 | NC_004561 | (ATTT)3 | p4 | 12 | 61483 | 61494 | Atropa belladonna chloroplast |
107 | NC_003119 | (ATTT)3 | p4 | 12 | 90137 | 90148 | Medicago truncatula chloroplast |
108 | NC_003119 | (ATTT)3 | p4 | 12 | 39320 | 39331 | Medicago truncatula chloroplast |
109 | NC_002652 | (ATTT)3 | p4 | 12 | 26997 | 27008 | Euglena longa plastid |
110 | NC_002652 | (ATTT)3 | p4 | 12 | 12054 | 12065 | Euglena longa plastid |
111 | NC_002652 | (ATTT)3 | p4 | 12 | 701 | 712 | Euglena longa plastid |
112 | NC_002202 | (ATTT)3 | p4 | 12 | 40932 | 40943 | Spinacia oleracea plastid |
113 | NC_001799 | (ATTT)3 | p4 | 12 | 16761 | 16772 | Toxoplasma gondii RH apicoplast |
114 | NC_001675 | (ATTT)3 | p4 | 12 | 74311 | 74322 | Cyanophora paradoxa cyanelle |
115 | NC_001603 | (ATTT)3 | p4 | 12 | 51072 | 51083 | Euglena gracilis chloroplast |
116 | NC_001603 | (ATTT)3 | p4 | 12 | 48155 | 48166 | Euglena gracilis chloroplast |
117 | NC_001603 | (ATTT)3 | p4 | 12 | 46198 | 46209 | Euglena gracilis chloroplast |
118 | NC_001568 | (ATTT)3 | p4 | 12 | 8492 | 8503 | Epifagus virginiana chloroplast |