Chloroplast Motifs - Perfect (AATT) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_021455 | (AATT)3 | p4 | 12 | 5582 | 5593 | Prinsepia utilis plastid |
2 | NC_021102 | (AATT)3 | p4 | 12 | 113510 | 113521 | Pachycladon cheesemanii chloroplast |
3 | NC_020607 | (AATT)3 | p4 | 12 | 111509 | 111520 | Artemisia frigida chloroplast |
4 | NC_020438 | (AATT)3 | p4 | 12 | 136982 | 136993 | Gonium pectorale chloroplast |
5 | NC_020320 | (AATT)3 | p4 | 12 | 122218 | 122229 | Chrysanthemum indicum voucher HeN001 chloroplast |
6 | NC_020318 | (AATT)3 | p4 | 12 | 114704 | 114715 | Magnolia grandiflora voucher NJ016 chloroplast |
7 | NC_020317 | (AATT)3 | p4 | 12 | 115119 | 115130 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
8 | NC_020316 | (AATT)3 | p4 | 12 | 115170 | 115181 | Magnolia officinalis chloroplast |
9 | NC_020146 | (AATT)3 | p4 | 12 | 40262 | 40273 | Equisetum hyemale chloroplast |
10 | NC_020092 | (AATT)3 | p4 | 12 | 122265 | 122276 | Chrysanthemum x morifolium chloroplast |
11 | NC_020018 | (AATT)3 | p4 | 12 | 37402 | 37413 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
12 | NC_019616 | (AATT)3 | p4 | 12 | 141377 | 141388 | Vaccinium macrocarpon plastid |
13 | NC_018552 | (AATT)3 | p4 | 12 | 52992 | 53003 | Capsicum annuum chloroplast |
14 | NC_018523 | (AATT)3 | p4 | 12 | 100633 | 100644 | Saccharina japonica chloroplast |
15 | NC_018357 | (AATT)3 | p4 | 12 | 115070 | 115081 | Magnolia denudata chloroplast |
16 | NC_017928 | (AATT)3 | p4 | 12 | 2781 | 2792 | Plasmodium falciparum HB3 apicoplast |
17 | NC_017754 | (AATT)3 | p4 | 12 | 26958 | 26969 | Eutreptiella gymnastica plastid |
18 | NC_016732 | (AATT)3 | p4 | 12 | 235690 | 235701 | Dunaliella salina chloroplast |
19 | NC_016731 | (AATT)3 | p4 | 12 | 22847 | 22858 | Synedra acus chloroplast |
20 | NC_016727 | (AATT)3 | p4 | 12 | 15369 | 15380 | Silene vulgaris chloroplast |
21 | NC_016430 | (AATT)3 | p4 | 12 | 31208 | 31219 | Eleutherococcus senticosus chloroplast |
22 | NC_015892 | (AATT)3 | p4 | 12 | 114899 | 114910 | Magnolia kwangsiensis chloroplast |
23 | NC_015645 | (AATT)3 | p4 | 12 | 152141 | 152152 | Schizomeris leibleinii chloroplast |
24 | NC_015645 | (AATT)3 | p4 | 12 | 182633 | 182644 | Schizomeris leibleinii chloroplast |
25 | NC_015610 | (AATT)3 | p4 | 12 | 118721 | 118732 | Nelumbo nucifera chloroplast |
26 | NC_015605 | (AATT)3 | p4 | 12 | 118619 | 118630 | Nelumbo lutea chloroplast |
27 | NC_015543 | (AATT)3 | p4 | 12 | 122139 | 122150 | Jacobaea vulgaris chloroplast |
28 | NC_014808 | (AATT)3 | p4 | 12 | 44693 | 44704 | Thalassiosira oceanica CCMP1005 chloroplast |
29 | NC_014808 | (AATT)3 | p4 | 12 | 77986 | 77997 | Thalassiosira oceanica CCMP1005 chloroplast |
30 | NC_014808 | (AATT)3 | p4 | 12 | 134092 | 134103 | Thalassiosira oceanica CCMP1005 chloroplast |
31 | NC_014675 | (AATT)3 | p4 | 12 | 3584 | 3595 | Isoetes flaccida chloroplast |
32 | NC_014287 | (AATT)3 | p4 | 12 | 20443 | 20454 | Durinskia baltica chloroplast |
33 | NC_014267 | (AATT)3 | p4 | 12 | 23047 | 23058 | Kryptoperidinium foliaceum chloroplast |
34 | NC_014267 | (AATT)3 | p4 | 12 | 40945 | 40956 | Kryptoperidinium foliaceum chloroplast |
35 | NC_013359 | (AATT)3 | p4 | 12 | 95360 | 95371 | Bryopsis hypnoides chloroplast |
36 | NC_012978 | (AATT)3 | p4 | 12 | 99300 | 99311 | Parachlorella kessleri chloroplast |
37 | NC_011600 | (AATT)4 | p4 | 16 | 67395 | 67410 | Vaucheria litorea chloroplast |
38 | NC_011600 | (AATT)3 | p4 | 12 | 1264 | 1275 | Vaucheria litorea chloroplast |
39 | NC_011156 | (AATT)3 | p4 | 12 | 12261 | 12272 | Pinus lambertiana chloroplast |
40 | NC_011155 | (AATT)3 | p4 | 12 | 12255 | 12266 | Pinus krempfii chloroplast |
41 | NC_011154 | (AATT)3 | p4 | 12 | 12227 | 12238 | Pinus gerardiana chloroplast |
42 | NC_011087 | (AATT)6 | p4 | 24 | 290044 | 290067 | Paulinella chromatophora chromatophore |
43 | NC_011087 | (AATT)3 | p4 | 12 | 904555 | 904566 | Paulinella chromatophora chromatophore |
44 | NC_010772 | (AATT)3 | p4 | 12 | 45328 | 45339 | Heterosigma akashiwo chloroplast |
45 | NC_009275 | (AATT)3 | p4 | 12 | 114150 | 114161 | Nasturtium officinale chloroplast |
46 | NC_009272 | (AATT)3 | p4 | 12 | 75991 | 76002 | Draba nemorosa chloroplast |
47 | NC_009271 | (AATT)3 | p4 | 12 | 114133 | 114144 | Crucihimalaya wallichii chloroplast |
48 | NC_009269 | (AATT)3 | p4 | 12 | 113436 | 113447 | Barbarea verna chloroplast |
49 | NC_009266 | (AATT)3 | p4 | 12 | 113594 | 113605 | Aethionema grandiflorum chloroplast |
50 | NC_009265 | (AATT)3 | p4 | 12 | 113462 | 113473 | Aethionema cordifolium chloroplast |
51 | NC_008589 | (AATT)3 | p4 | 12 | 17164 | 17175 | Thalassiosira pseudonana chloroplast |
52 | NC_008372 | (AATT)3 | p4 | 12 | 109647 | 109658 | Stigeoclonium helveticum chloroplast |
53 | NC_008335 | (AATT)3 | p4 | 12 | 117618 | 117629 | Platanus occidentalis chloroplast |
54 | NC_008097 | (AATT)3 | p4 | 12 | 149148 | 149159 | Chara vulgaris chloroplast |
55 | NC_007932 | (AATT)3 | p4 | 12 | 100593 | 100604 | Porphyra yezoensis chloroplast |
56 | NC_007758 | (AATT)3 | p4 | 12 | 32826 | 32837 | Theileria parva strain Muguga apicoplast |
57 | NC_007758 | (AATT)3 | p4 | 12 | 31341 | 31352 | Theileria parva strain Muguga apicoplast |
58 | NC_007758 | (AATT)3 | p4 | 12 | 30105 | 30116 | Theileria parva strain Muguga apicoplast |
59 | NC_007144 | (AATT)3 | p4 | 12 | 10283 | 10294 | Cucumis sativus chloroplast |
60 | NC_006861 | (AATT)3 | p4 | 12 | 43597 | 43608 | Huperzia lucidula chloroplast |
61 | NC_006290 | (AATT)3 | p4 | 12 | 30939 | 30950 | Panax ginseng chloroplast |
62 | NC_006137 | (AATT)3 | p4 | 12 | 96465 | 96476 | Gracilaria tenuistipitata var. liui chloroplast |
63 | NC_005353 | (AATT)3 | p4 | 12 | 7259 | 7270 | Chlamydomonas reinhardtii chloroplast |
64 | NC_005087 | (AATT)3 | p4 | 12 | 35262 | 35273 | Physcomitrella patens subsp. patens chloroplast |
65 | NC_004677 | (AATT)3 | p4 | 12 | 12175 | 12186 | Pinus koraiensis chloroplast |
66 | NC_002694 | (AATT)3 | p4 | 12 | 16641 | 16652 | Lotus japonicus chloroplast |
67 | NC_002652 | (AATT)3 | p4 | 12 | 20184 | 20195 | Euglena longa plastid |
68 | NC_002202 | (AATT)3 | p4 | 12 | 123191 | 123202 | Spinacia oleracea plastid |
69 | NC_001603 | (AATT)3 | p4 | 12 | 43583 | 43594 | Euglena gracilis chloroplast |
70 | NC_000925 | (AATT)3 | p4 | 12 | 100009 | 100020 | Porphyra purpurea chloroplast |