Chloroplast Motifs - Perfect (AAAG) Repeats
S.No | Sequence ID | SSR | SSR Type | Tract Length | Start | End | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_021648 | (AAAG)3 | p4 | 12 | 12765 | 12776 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
2 | NC_021441 | (AAAG)3 | p4 | 12 | 80889 | 80900 | Taiwania flousiana chloroplast |
3 | NC_021439 | (AAAG)3 | p4 | 12 | 110302 | 110313 | Pinus massoniana chloroplast |
4 | NC_021438 | (AAAG)3 | p4 | 12 | 107274 | 107285 | Gnetum montanum chloroplast |
5 | NC_021433 | (AAAG)3 | p4 | 12 | 31970 | 31981 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
6 | NC_021432 | (AAAG)3 | p4 | 12 | 22380 | 22391 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
7 | NC_021432 | (AAAG)3 | p4 | 12 | 36303 | 36314 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
8 | NC_021429 | (AAAG)3 | p4 | 12 | 32064 | 32075 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
9 | NC_021426 | (AAAG)3 | p4 | 12 | 70536 | 70547 | Trochodendron aralioides chloroplast |
10 | NC_021423 | (AAAG)3 | p4 | 12 | 111365 | 111376 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
11 | NC_021372 | (AAAG)3 | p4 | 12 | 3396 | 3407 | Pharus latifolius chloroplast |
12 | NC_019649 | (AAAG)3 | p4 | 12 | 66224 | 66235 | Festuca ovina plastid |
13 | NC_018114 | (AAAG)3 | p4 | 12 | 48313 | 48324 | Erycina pusilla chloroplast |
14 | NC_018051 | (AAAG)3 | p4 | 12 | 116911 | 116922 | Vigna unguiculata chloroplast |
15 | NC_016736 | (AAAG)3 | p4 | 12 | 24519 | 24530 | Ricinus communis chloroplast |
16 | NC_016430 | (AAAG)3 | p4 | 12 | 72815 | 72826 | Eleutherococcus senticosus chloroplast |
17 | NC_016069 | (AAAG)3 | p4 | 12 | 19184 | 19195 | Picea morrisonicola chloroplast |
18 | NC_016065 | (AAAG)3 | p4 | 12 | 81852 | 81863 | Taiwania cryptomerioides chloroplast DNA |
19 | NC_016064 | (AAAG)3 | p4 | 12 | 112217 | 112228 | Pseudotsuga sinensis var. wilsoniana chloroplast |
20 | NC_016058 | (AAAG)3 | p4 | 12 | 81203 | 81214 | Larix decidua chloroplast |
21 | NC_015830 | (AAAG)3 | p4 | 12 | 18927 | 18938 | Bambusa emeiensis chloroplast |
22 | NC_015623 | (AAAG)3 | p4 | 12 | 72879 | 72890 | Olea europaea subsp. maroccana chloroplast |
23 | NC_015621 | (AAAG)3 | p4 | 12 | 32198 | 32209 | Ageratina adenophora chloroplast |
24 | NC_015608 | (AAAG)3 | p4 | 12 | 72959 | 72970 | Olea woodiana subsp. woodiana chloroplast |
25 | NC_015604 | (AAAG)3 | p4 | 12 | 72863 | 72874 | Olea europaea subsp. cuspidata chloroplast |
26 | NC_015401 | (AAAG)3 | p4 | 12 | 72868 | 72879 | Olea europaea subsp. europaea plastid |
27 | NC_015359 | (AAAG)3 | p4 | 12 | 65872 | 65883 | Chlorella variabilis plastid |
28 | NC_015084 | (AAAG)3 | p4 | 12 | 108917 | 108928 | Coccomyxa sp. C-169 plastid |
29 | NC_014807 | (AAAG)3 | p4 | 12 | 25039 | 25050 | Corynocarpus laevigata chloroplast |
30 | NC_014569 | (AAAG)3 | p4 | 12 | 25760 | 25771 | Erodium texanum plastid |
31 | NC_014346 | (AAAG)3 | p4 | 12 | 64574 | 64585 | Floydiella terrestris chloroplast |
32 | NC_014346 | (AAAG)3 | p4 | 12 | 69945 | 69956 | Floydiella terrestris chloroplast |
33 | NC_014346 | (AAAG)3 | p4 | 12 | 228661 | 228672 | Floydiella terrestris chloroplast |
34 | NC_014346 | (AAAG)3 | p4 | 12 | 259237 | 259248 | Floydiella terrestris chloroplast |
35 | NC_014346 | (AAAG)3 | p4 | 12 | 298660 | 298671 | Floydiella terrestris chloroplast |
36 | NC_014346 | (AAAG)4 | p4 | 16 | 347124 | 347139 | Floydiella terrestris chloroplast |
37 | NC_014346 | (AAAG)3 | p4 | 12 | 369655 | 369666 | Floydiella terrestris chloroplast |
38 | NC_013843 | (AAAG)3 | p4 | 12 | 116935 | 116946 | Vigna radiata chloroplast |
39 | NC_013843 | (AAAG)3 | p4 | 12 | 116935 | 116946 | Vigna radiata chloroplast |
40 | NC_013707 | (AAAG)3 | p4 | 12 | 72816 | 72827 | Olea europaea chloroplast |
41 | NC_013707 | (AAAG)3 | p4 | 12 | 72841 | 72852 | Olea europaea chloroplast |
42 | NC_013088 | (AAAG)3 | p4 | 12 | 19009 | 19020 | Dendrocalamus latiflorus chloroplast |
43 | NC_012978 | (AAAG)3 | p4 | 12 | 46140 | 46151 | Parachlorella kessleri chloroplast |
44 | NC_012927 | (AAAG)3 | p4 | 12 | 18821 | 18832 | Bambusa oldhamii chloroplast |
45 | NC_012818 | (AAAG)3 | p4 | 12 | 145006 | 145017 | Alsophila spinulosa chloroplast |
46 | NC_011942 | (AAAG)3 | p4 | 12 | 49674 | 49685 | Gnetum parvifolium chloroplast |
47 | NC_011930 | (AAAG)3 | p4 | 12 | 31044 | 31055 | Keteleeria davidiana chloroplast |
48 | NC_011163 | (AAAG)3 | p4 | 12 | 47133 | 47144 | Cicer arietinum chloroplast |
49 | NC_011159 | (AAAG)3 | p4 | 12 | 106847 | 106858 | Pinus nelsonii chloroplast |
50 | NC_011158 | (AAAG)3 | p4 | 12 | 106810 | 106821 | Pinus monophylla chloroplast |
51 | NC_011156 | (AAAG)3 | p4 | 12 | 107389 | 107400 | Pinus lambertiana chloroplast |
52 | NC_011155 | (AAAG)3 | p4 | 12 | 107192 | 107203 | Pinus krempfii chloroplast |
53 | NC_011152 | (AAAG)3 | p4 | 12 | 111445 | 111456 | Picea sitchensis chloroplast |
54 | NC_011087 | (AAAG)3 | p4 | 12 | 913954 | 913965 | Paulinella chromatophora chromatophore |
55 | NC_010772 | (AAAG)3 | p4 | 12 | 60411 | 60422 | Heterosigma akashiwo chloroplast |
56 | NC_010654 | (AAAG)3 | p4 | 12 | 110150 | 110161 | Welwitschia mirabilis chloroplast |
57 | NC_010548 | (AAAG)3 | p4 | 12 | 44534 | 44545 | Cryptomeria japonica chloroplast |
58 | NC_010442 | (AAAG)3 | p4 | 12 | 150762 | 150773 | Trachelium caeruleum chloroplast |
59 | NC_010362 | (AAAG)3 | p4 | 12 | 8844 | 8855 | Oenothera parviflora chloroplast |
60 | NC_010361 | (AAAG)3 | p4 | 12 | 68434 | 68445 | Oenothera biennis chloroplast |
61 | NC_010361 | (AAAG)3 | p4 | 12 | 9003 | 9014 | Oenothera biennis chloroplast |
62 | NC_010360 | (AAAG)3 | p4 | 12 | 68925 | 68936 | Oenothera glazioviana chloroplast |
63 | NC_010360 | (AAAG)3 | p4 | 12 | 8945 | 8956 | Oenothera glazioviana chloroplast |
64 | NC_010358 | (AAAG)3 | p4 | 12 | 68338 | 68349 | Oenothera argillicola chloroplast |
65 | NC_009573 | (AAAG)3 | p4 | 12 | 106513 | 106524 | Rhodomonas salina chloroplast |
66 | NC_008456 | (AAAG)3 | p4 | 12 | 45574 | 45585 | Drimys granadensis chloroplast |
67 | NC_008454 | (AAAG)3 | p4 | 12 | 132176 | 132187 | Pelargonium x hortorum chloroplast |
68 | NC_008408 | (AAAG)3 | p4 | 12 | 52152 | 52163 | Bigelowiella natans plastid |
69 | NC_008372 | (AAAG)3 | p4 | 12 | 204775 | 204786 | Stigeoclonium helveticum chloroplast |
70 | NC_008359 | (AAAG)3 | p4 | 12 | 134661 | 134672 | Morus indica chloroplast |
71 | NC_008099 | (AAAG)3 | p4 | 12 | 12407 | 12418 | Oltmannsiellopsis viridis chloroplast |
72 | NC_006290 | (AAAG)3 | p4 | 12 | 72218 | 72229 | Panax ginseng chloroplast |
73 | NC_006084 | (AAAG)3 | p4 | 12 | 6174 | 6185 | Saccharum hybrid cultivar NCo 310 chloroplast |
74 | NC_005878 | (AAAG)3 | p4 | 12 | 67800 | 67811 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
75 | NC_005086 | (AAAG)3 | p4 | 12 | 128888 | 128899 | Amborella trichopoda chloroplast |
76 | NC_004799 | (AAAG)3 | p4 | 12 | 47047 | 47058 | Cyanidioschyzon merolae strain 10D chloroplast |
77 | NC_004677 | (AAAG)3 | p4 | 12 | 107259 | 107270 | Pinus koraiensis chloroplast |
78 | NC_002693 | (AAAG)3 | p4 | 12 | 68910 | 68921 | Oenothera elata subsp. hookeri plastid plastome I |
79 | NC_002693 | (AAAG)3 | p4 | 12 | 9016 | 9027 | Oenothera elata subsp. hookeri plastid plastome I |
80 | NC_001631 | (AAAG)3 | p4 | 12 | 110312 | 110323 | Pinus thunbergii chloroplast |
81 | NC_000927 | (AAAG)3 | p4 | 12 | 50392 | 50403 | Nephroselmis olivacea chloroplast |