ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Compound Repeats of Gossypium gossypioides chloroplast

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S.No.	Genome ID	SSR	SSR Type	Start	End	Tract Length	Primer Design
1	NC_017894	(T)11	p1	2330	2340	11	Design Primer
2	NC_017894	(ATAGAA)3	p6	4474	4491	18	Design Primer
3	NC_017894	(T)13	p1	4808	4820	13	Design Primer
4	NC_017894	(T)10	p1	5599	5608	10	Design Primer
5	NC_017894	(T)10	p1	5906	5915	10	Design Primer
6	NC_017894	(AAAT)3aatttaggaagaaaaagcctcaataagaattcaaactaccccatattgtatgattgtctgaatgcaatattttta(T)10attagaatcgaaaagtttaattagaatagaaaagtataataaaagtt(A)11	c	6449	6603	155	Design Primer
7	NC_017894	(TTA)4	p3	8385	8396	12	Design Primer
8	NC_017894	(T)11	p1	9368	9378	11	Design Primer
9	NC_017894	(T)10	p1	9790	9799	10	Design Primer
10	NC_017894	(T)13caattgaaaattccc(AAT)4	c	13494	13533	40	Design Primer
11	NC_017894	(T)10	p1	14677	14686	10	Design Primer
12	NC_017894	(A)10	p1	14862	14871	10	Design Primer
13	NC_017894	(CT)8ttttttttaagt(A)10	c	17000	17037	38	Design Primer
14	NC_017894	(T)11	p1	19234	19244	11	Design Primer
15	NC_017894	(T)11	p1	21663	21673	11	Design Primer
16	NC_017894	(T)12	p1	26956	26967	12	Design Primer
17	NC_017894	(T)12attg(A)11	c	28500	28526	27	Design Primer
18	NC_017894	(A)10	p1	29799	29808	10	Design Primer
19	NC_017894	(A)10	p1	29944	29953	10	Design Primer
20	NC_017894	(T)10	p1	30227	30236	10	Design Primer
21	NC_017894	(T)10	p1	37001	37010	10	Design Primer
22	NC_017894	(ATCT)3	p4	43983	43994	12	Design Primer
23	NC_017894	(T)10	p1	51099	51108	10	Design Primer
24	NC_017894	(A)10	p1	52559	52568	10	Design Primer
25	NC_017894	(T)10	p1	54659	54668	10	Design Primer
26	NC_017894	(T)10	p1	58024	58033	10	Design Primer
27	NC_017894	(TAGT)3	p4	62383	62394	12	Design Primer
28	NC_017894	(A)10	p1	65044	65053	10	Design Primer
29	NC_017894	(T)10	p1	65987	65996	10	Design Primer
30	NC_017894	(T)10attttaaggaattgcttagtcgtctagtaacaagtaagagtagtcgatagtattagatatagat(A)10	c	69397	69480	84	Design Primer
31	NC_017894	(T)15	p1	70328	70342	15	Design Primer
32	NC_017894	(T)11	p1	71296	71306	11	Design Primer
33	NC_017894	(T)12	p1	71619	71630	12	Design Primer
34	NC_017894	(T)11caaaaagaaagaaaaaaaatagtc(T)11	c	74775	74820	46	Design Primer
35	NC_017894	(A)11	p1	74989	74999	11	Design Primer
36	NC_017894	(G)10	p1	80059	80068	10	Design Primer
37	NC_017894	(T)11	p1	81184	81194	11	Design Primer
38	NC_017894	(T)12	p1	84490	84501	12	Design Primer
39	NC_017894	(T)13	p1	85001	85013	13	Design Primer
40	NC_017894	(A)10	p1	86088	86097	10	Design Primer
41	NC_017894	(T)10	p1	103854	103863	10	Design Primer
42	NC_017894	(AAGAA)3	p5	104855	104869	15	Design Primer
43	NC_017894	(A)13	p1	115244	115256	13	Design Primer
44	NC_017894	(A)10	p1	115366	115375	10	Design Primer
45	NC_017894	(A)11	p1	115889	115899	11	Design Primer
46	NC_017894	(A)11	p1	117139	117149	11	Design Primer
47	NC_017894	(GAAT)3	p4	118122	118133	12	Design Primer
48	NC_017894	(A)10	p1	118299	118308	10	Design Primer
49	NC_017894	(TTTC)3	p4	123125	123136	12	Design Primer
50	NC_017894	(ATCA)3	p4	126143	126154	12	Design Primer
51	NC_017894	(C)10	p1	130550	130559	10	Design Primer
52	NC_017894	(A)11gaatattaatagtca(T)11	c	131449	131485	37	Design Primer
53	NC_017894	(T)13	p1	134301	134313	13	Design Primer
54	NC_017894	(TTTCT)3	p5	143893	143907	15	Design Primer
55	NC_017894	(A)10	p1	144900	144909	10	Design Primer

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Compound Repeats of Gossypium gossypioides chloroplast