ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Perfect Repeats of Lotus japonicus chloroplast

Click on Table Heading To Sort Results Accordingly

S.No.	Genome ID	Motif	Iterations	Start	End	Tract Length	A%	T%	C%	Protein ID
1	NC_002694	T	12	3935	3946	12	0 %	100 %	0 %	Non-Coding
2	NC_002694	TA	6	5046	5057	12	50 %	50 %	0 %	Non-Coding
3	NC_002694	TAAT	3	10106	10117	12	50 %	50 %	0 %	Non-Coding
4	NC_002694	AT	11	14652	14673	22	50 %	50 %	0 %	Non-Coding
5	NC_002694	AT	6	14677	14688	12	50 %	50 %	0 %	Non-Coding
6	NC_002694	T	12	14704	14715	12	0 %	100 %	0 %	Non-Coding
7	NC_002694	TAT	5	15044	15058	15	33.33 %	66.67 %	0 %	Non-Coding
8	NC_002694	TAT	4	15067	15078	12	33.33 %	66.67 %	0 %	Non-Coding
9	NC_002694	AATT	3	16641	16652	12	50 %	50 %	0 %	157011997
10	NC_002694	T	16	18335	18350	16	0 %	100 %	0 %	Non-Coding
11	NC_002694	ATA	5	24438	24452	15	66.67 %	33.33 %	0 %	Non-Coding
12	NC_002694	ATA	4	24467	24478	12	66.67 %	33.33 %	0 %	Non-Coding
13	NC_002694	A	12	24506	24517	12	100 %	0 %	0 %	Non-Coding
14	NC_002694	T	12	25535	25546	12	0 %	100 %	0 %	Non-Coding
15	NC_002694	TA	8	25584	25599	16	50 %	50 %	0 %	Non-Coding
16	NC_002694	T	12	29622	29633	12	0 %	100 %	0 %	Non-Coding
17	NC_002694	T	12	30074	30085	12	0 %	100 %	0 %	Non-Coding
18	NC_002694	T	12	30245	30256	12	0 %	100 %	0 %	Non-Coding
19	NC_002694	T	12	33855	33866	12	0 %	100 %	0 %	Non-Coding
20	NC_002694	T	15	34093	34107	15	0 %	100 %	0 %	Non-Coding
21	NC_002694	AT	6	36797	36808	12	50 %	50 %	0 %	13518436
22	NC_002694	A	12	42790	42801	12	100 %	0 %	0 %	13518438
23	NC_002694	A	13	44795	44807	13	100 %	0 %	0 %	Non-Coding
24	NC_002694	T	12	44903	44914	12	0 %	100 %	0 %	Non-Coding
25	NC_002694	T	12	44918	44929	12	0 %	100 %	0 %	Non-Coding
26	NC_002694	A	13	44931	44943	13	100 %	0 %	0 %	Non-Coding
27	NC_002694	A	12	46678	46689	12	100 %	0 %	0 %	Non-Coding
28	NC_002694	TA	6	46858	46869	12	50 %	50 %	0 %	Non-Coding
29	NC_002694	TA	7	46879	46892	14	50 %	50 %	0 %	Non-Coding
30	NC_002694	AT	6	47747	47758	12	50 %	50 %	0 %	Non-Coding
31	NC_002694	AT	6	58363	58374	12	50 %	50 %	0 %	Non-Coding
32	NC_002694	TA	6	60451	60462	12	50 %	50 %	0 %	Non-Coding
33	NC_002694	T	13	60495	60507	13	0 %	100 %	0 %	Non-Coding
34	NC_002694	T	14	63685	63698	14	0 %	100 %	0 %	Non-Coding
35	NC_002694	TTC	4	65943	65954	12	0 %	66.67 %	33.33 %	Non-Coding
36	NC_002694	T	12	66608	66619	12	0 %	100 %	0 %	Non-Coding
37	NC_002694	T	13	66972	66984	13	0 %	100 %	0 %	Non-Coding
38	NC_002694	T	12	68017	68028	12	0 %	100 %	0 %	13518462
39	NC_002694	T	12	68111	68122	12	0 %	100 %	0 %	13518462
40	NC_002694	T	16	72833	72848	16	0 %	100 %	0 %	13518462
41	NC_002694	T	12	75820	75831	12	0 %	100 %	0 %	13518462
42	NC_002694	TAT	4	78384	78395	12	33.33 %	66.67 %	0 %	13518462
43	NC_002694	T	13	78534	78546	13	0 %	100 %	0 %	13518462
44	NC_002694	TA	8	92154	92169	16	50 %	50 %	0 %	13518462
45	NC_002694	TA	6	106469	106480	12	50 %	50 %	0 %	13518462
46	NC_002694	TA	9	109450	109467	18	50 %	50 %	0 %	13518462
47	NC_002694	TA	7	120171	120184	14	50 %	50 %	0 %	13518462
48	NC_002694	T	13	124217	124229	13	0 %	100 %	0 %	13518462
49	NC_002694	T	14	124658	124671	14	0 %	100 %	0 %	13518462
50	NC_002694	A	12	124826	124837	12	100 %	0 %	0 %	13518462
51	NC_002694	TA	6	125976	125987	12	50 %	50 %	0 %	13518462
52	NC_002694	AT	8	140286	140301	16	50 %	50 %	0 %	Non-Coding

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Perfect Repeats of Lotus japonicus chloroplast