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ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Repeat Summary of Oryza rufipogon chloroplast

Repeats Extracted by IMEx

Genome Composition:

Genome IDNC_017835
OrganismOryza rufipogon chloroplast
Seq. Length134544 bp
A %30.65 %
T %30.35 %
G %19.58 %
C %19.42 %
Nucleotide Composition of Oryza rufipogon chloroplastA% (30.65 %)T% (30.35 %)G% (19.58 %)C% (19.42 %)

Summary of Perfect Repeats:

SizeRepeatsDetails
Mono2Get Repeats
Di0Get Repeats
Tri3Get Repeats
Tetra9Get Repeats
Penta0Get Repeats
Hexa0Get Repeats
TOTAL14Get Repeats
Microsatellite Distribution of Perfect SSRs in Oryza rufipogon chloroplast 20390014MonoDiTriTetraPentaHexaTotal051015Number of MicrosatellitesExport to raster or vector imagePrint the chart

Summary of Imperfect Repeats:

SizeRepeatsDetails
Mono8Get Repeats
Di11Get Repeats
Tri41Get Repeats
Tetra73Get Repeats
Penta15Get Repeats
Hexa8Get Repeats
TOTAL156Get Repeats
Microsatellite Distribution of Imperfect SSRs in Oryza rufipogon chloroplast 8114173158156MonoDiTriTetraPentaHexaTotal050100150200Number of MicrosatellitesExport to raster or vector imagePrint the chart